RNA–Protein interactions for RNA: ENST00000523952.5

PTPN12-216, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-216ENST00000523952 ENGP17813 658 aa10.1□□□□□ -0.79
PTPN12-216ENST00000523952 GJA4P35212 333 aa10.1□□□□□ -0.79
PTPN12-216ENST00000523952 FOSBP53539 338 aa10.1□□□□□ -0.79
PTPN12-216ENST00000523952 SEC13P55735 322 aa10.1□□□□□ -0.79
PTPN12-216ENST00000523952 SPAG1Q07617 926 aa10.1□□□□□ -0.79
PTPN12-216ENST00000523952 SCRN1Q12765 414 aa10.1□□□□□ -0.79
PTPN12-216ENST00000523952 ZNF423Q2M1K9 1284 aa10.1□□□□□ -0.79
PTPN12-216ENST00000523952 COL28A1Q2UY09 1125 aa10.1□□□□□ -0.79
PTPN12-216ENST00000523952 SLC39A12Q504Y0 691 aa10.1□□□□□ -0.79
PTPN12-216ENST00000523952 SEZ6Q53EL9 994 aa10.1□□□□□ -0.79
PTPN12-216ENST00000523952 C2orf27AQ580R0 203 aa10.1□□□□□ -0.79
PTPN12-216ENST00000523952 METTL23Q86XA0 190 aa10.1□□□□□ -0.79
PTPN12-216ENST00000523952 CHCHD4Q8N4Q1 142 aa10.1□□□□□ -0.79
PTPN12-216ENST00000523952 TTC9BQ8N6N2 239 aa10.1□□□□□ -0.79
PTPN12-216ENST00000523952 SPRYD3Q8NCJ5 442 aa10.1□□□□□ -0.79
PTPN12-216ENST00000523952 ATP2A3Q93084 1043 aa10.1□□□□□ -0.79
PTPN12-216ENST00000523952 BICD1Q96G01 975 aa10.1□□□□□ -0.79
PTPN12-216ENST00000523952 MTMR9Q96QG7 549 aa10.1□□□□□ -0.79
PTPN12-216ENST00000523952 ZSWIM6Q9HCJ5 1215 aa10.1□□□□□ -0.79
PTPN12-216ENST00000523952 FBRSL1Q9HCM7 1045 aaKnown RBP10.1□□□□□ -0.79
PTPN12-216ENST00000523952 DUS2Q9NX74 493 aaKnown RBP10.1□□□□□ -0.79
PTPN12-216ENST00000523952 UBQLN1Q9UMX0 589 aaKnown RBP10.1□□□□□ -0.79
PTPN12-216ENST00000523952 MAGED2Q9UNF1 606 aaPredicted RBP10.1□□□□□ -0.79
PTPN12-216ENST00000523952 RBM19Q9Y4C8 960 aaKnown RBP10.1□□□□□ -0.79
PTPN12-216ENST00000523952 PCDH15Q96QU1 1955 aa10.09□□□□□ -0.79
PTPN12-216ENST00000523952 OTOL1A6NHN0 477 aaPredicted RBP10.09□□□□□ -0.79
PTPN12-216ENST00000523952 CLDN3O15551 220 aa10.09□□□□□ -0.79
PTPN12-216ENST00000523952 OPHN1O60890 802 aa10.09□□□□□ -0.79
PTPN12-216ENST00000523952 ZIC2O95409 532 aaPredicted RBP10.09□□□□□ -0.79
PTPN12-216ENST00000523952 LARGE1O95461 756 aa10.09□□□□□ -0.79
PTPN12-216ENST00000523952 CXCL8P10145 99 aa10.09□□□□□ -0.79
PTPN12-216ENST00000523952 TYMPP19971 482 aa10.09□□□□□ -0.79
PTPN12-216ENST00000523952 BCKDHBP21953 392 aa10.09□□□□□ -0.79
PTPN12-216ENST00000523952 MUTP22033 750 aa10.09□□□□□ -0.79
PTPN12-216ENST00000523952 NMT1P30419 496 aaKnown RBP10.09□□□□□ -0.79
PTPN12-216ENST00000523952 NPTX2P47972 431 aa10.09□□□□□ -0.79
PTPN12-216ENST00000523952 CDR1P51861 262 aa10.09□□□□□ -0.79
PTPN12-216ENST00000523952 GFPT1Q06210 699 aaPredicted RBP10.09□□□□□ -0.79
PTPN12-216ENST00000523952 BYSLQ13895 437 aaKnown RBP10.09□□□□□ -0.79
PTPN12-216ENST00000523952 MTF1Q14872 753 aa10.09□□□□□ -0.79
PTPN12-216ENST00000523952 SLC10A6Q3KNW5 377 aa10.09□□□□□ -0.79
PTPN12-216ENST00000523952 SOWAHCQ53LP3 525 aaPredicted RBP10.09□□□□□ -0.79
PTPN12-216ENST00000523952 SYT12Q8IV01 421 aa10.09□□□□□ -0.79
PTPN12-216ENST00000523952 THEM5Q8N1Q8 247 aa10.09□□□□□ -0.79
PTPN12-216ENST00000523952 PGBD3Q8N328 593 aa10.09□□□□□ -0.79
PTPN12-216ENST00000523952 USP13Q92995 863 aaPredicted RBP10.09□□□□□ -0.79
PTPN12-216ENST00000523952 ZBTB45Q96K62 511 aaPredicted RBP10.09□□□□□ -0.79
PTPN12-216ENST00000523952 CNOT6LQ96LI5 555 aaKnown RBP10.09□□□□□ -0.79
PTPN12-216ENST00000523952 CCDC86Q9H6F5 360 aaKnown RBP10.09□□□□□ -0.79
PTPN12-216ENST00000523952 ECT2Q9H8V3 914 aa10.09□□□□□ -0.79
PTPN12-216ENST00000523952 PLEKHA5Q9HAU0 1116 aa10.09□□□□□ -0.79
PTPN12-216ENST00000523952 TRPC7Q9HCX4 862 aa10.09□□□□□ -0.79
PTPN12-216ENST00000523952 PTPRHQ9HD43 1115 aa10.09□□□□□ -0.79
PTPN12-216ENST00000523952 ABI2Q9NYB9 513 aaPredicted RBP10.09□□□□□ -0.79
PTPN12-216ENST00000523952 CCL26Q9Y258 94 aa10.09□□□□□ -0.79
PTPN12-216ENST00000523952 GPSM3Q9Y4H4 160 aa10.09□□□□□ -0.79
PTPN12-216ENST00000523952 ATXN2Q99700 1313 aaKnown RBP10.08□□□□□ -0.8
PTPN12-216ENST00000523952 TMEM131Q92545 1883 aa10.08□□□□□ -0.8
PTPN12-216ENST00000523952 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.08□□□□□ -0.8
PTPN12-216ENST00000523952 BTBD18B2RXH4 712 aa10.08□□□□□ -0.8
PTPN12-216ENST00000523952 SLC16A4O15374 487 aa10.08□□□□□ -0.8
PTPN12-216ENST00000523952 DTNBO60941 627 aa10.08□□□□□ -0.8
PTPN12-216ENST00000523952 TOM1L1O75674 476 aa10.08□□□□□ -0.8
PTPN12-216ENST00000523952 CKMP06732 381 aa10.08□□□□□ -0.8
PTPN12-216ENST00000523952 OR52Z1P0C646 297 aa10.08□□□□□ -0.8
PTPN12-216ENST00000523952 CYP3A5P20815 502 aa10.08□□□□□ -0.8
PTPN12-216ENST00000523952 LRPAP1P30533 357 aa10.08□□□□□ -0.8
PTPN12-216ENST00000523952 SMTNP53814 917 aa10.08□□□□□ -0.8
PTPN12-216ENST00000523952 NLRP12P59046 1061 aa10.08□□□□□ -0.8
PTPN12-216ENST00000523952 SCAPQ12770 1279 aa10.08□□□□□ -0.8
PTPN12-216ENST00000523952 HNRNPDQ14103 355 aaKnown RBP10.08□□□□□ -0.8
PTPN12-216ENST00000523952 SAFBQ15424 915 aaKnown RBP eCLIP10.08□□□□□ -0.8
PTPN12-216ENST00000523952 LYSMD4Q5XG99 296 aa10.08□□□□□ -0.8
PTPN12-216ENST00000523952 TXNDC8Q6A555 127 aa10.08□□□□□ -0.8
PTPN12-216ENST00000523952 DIS3L2Q8IYB7 885 aaKnown RBP10.08□□□□□ -0.8
PTPN12-216ENST00000523952 TMEFF1Q8IYR6 380 aa10.08□□□□□ -0.8
PTPN12-216ENST00000523952 CCDC33Q8N5R6 958 aa10.08□□□□□ -0.8
PTPN12-216ENST00000523952 SPPL2BQ8TCT7 592 aa10.08□□□□□ -0.8
PTPN12-216ENST00000523952 WHAMMQ8TF30 809 aa10.08□□□□□ -0.8
PTPN12-216ENST00000523952 C2orf15Q8WU43 125 aaKnown RBP10.08□□□□□ -0.8
PTPN12-216ENST00000523952 RNF166Q96A37 237 aaPredicted RBP10.08□□□□□ -0.8
PTPN12-216ENST00000523952 SENP8Q96LD8 212 aa10.08□□□□□ -0.8
PTPN12-216ENST00000523952 TMEM60Q9H2L4 133 aa10.08□□□□□ -0.8
PTPN12-216ENST00000523952 POLMQ9NP87 494 aaPredicted RBP10.08□□□□□ -0.8
PTPN12-216ENST00000523952 DDX19AQ9NUU7 478 aaKnown RBP10.08□□□□□ -0.8
PTPN12-216ENST00000523952 UXTQ9UBK9 157 aaPredicted RBP10.08□□□□□ -0.8
PTPN12-216ENST00000523952 DSEQ9UL01 958 aa10.08□□□□□ -0.8
PTPN12-216ENST00000523952 TBX20Q9UMR3 447 aa10.08□□□□□ -0.8
PTPN12-216ENST00000523952 KIAA1024Q9UPX6 916 aa10.08□□□□□ -0.8
PTPN12-216ENST00000523952 GOLGA4Q13439 2230 aaKnown RBP10.08□□□□□ -0.8
PTPN12-216ENST00000523952 TRAV19A0A0A6YYK7 116 aa10.07□□□□□ -0.8
PTPN12-216ENST00000523952 TNFRSF10BO14763 440 aa10.07□□□□□ -0.8
PTPN12-216ENST00000523952 HIP1RO75146 1068 aa10.07□□□□□ -0.8
PTPN12-216ENST00000523952 CLTAP09496 248 aa10.07□□□□□ -0.8
PTPN12-216ENST00000523952 USP17L7P0C7H9 530 aa10.07□□□□□ -0.8
PTPN12-216ENST00000523952 ATF6P18850 670 aa10.07□□□□□ -0.8
PTPN12-216ENST00000523952 PROZP22891 400 aa10.07□□□□□ -0.8
PTPN12-216ENST00000523952 PAX3P23760 479 aa10.07□□□□□ -0.8
PTPN12-216ENST00000523952 SMARCB1Q12824 385 aa10.07□□□□□ -0.8
PTPN12-216ENST00000523952 DUOXA1Q1HG43 343 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms