RNA–Protein interactions for RNA: ENST00000523427.1

PVT1-219, Transcript of Pvt1 oncogene, humanhuman

TSL 3 BASIC

Gene PVT1, Length 938 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-219ENST00000523427 TDP1Q9NUW8 608 aa27.96■■■□□ 2.07
PVT1-219ENST00000523427 C2CD2Q9Y426 696 aa27.96■■■□□ 2.07
PVT1-219ENST00000523427 TSC2P49815 1807 aa27.95■■■□□ 2.07
PVT1-219ENST00000523427 KPNA7A9QM74 516 aa27.95■■■□□ 2.06
PVT1-219ENST00000523427 TRDMT1O14717 391 aaKnown RBP27.95■■■□□ 2.06
PVT1-219ENST00000523427 HMGA1P17096 107 aaKnown RBP27.95■■■□□ 2.06
PVT1-219ENST00000523427 SCP2P22307 547 aa27.95■■■□□ 2.06
PVT1-219ENST00000523427 GALK1P51570 392 aa27.95■■■□□ 2.06
PVT1-219ENST00000523427 GTF2BQ00403 316 aa27.95■■■□□ 2.06
PVT1-219ENST00000523427 RIN3Q8TB24 985 aa27.95■■■□□ 2.06
PVT1-219ENST00000523427 RAD54LQ92698 747 aa27.95■■■□□ 2.06
PVT1-219ENST00000523427 LOXL4Q96JB6 756 aa27.95■■■□□ 2.06
PVT1-219ENST00000523427 AK8Q96MA6 479 aa27.95■■■□□ 2.06
PVT1-219ENST00000523427 FIZ1Q96SL8 496 aa27.95■■■□□ 2.06
PVT1-219ENST00000523427 TRPC7Q9HCX4 862 aa27.95■■■□□ 2.06
PVT1-219ENST00000523427 ANGPTL2Q9UKU9 493 aa27.95■■■□□ 2.06
PVT1-219ENST00000523427 GJB2P29033 226 aa27.94■■■□□ 2.06
PVT1-219ENST00000523427 RAP1GAPP47736 663 aa27.94■■■□□ 2.06
PVT1-219ENST00000523427 TSPY1Q01534 308 aa27.94■■■□□ 2.06
PVT1-219ENST00000523427 GRIN1Q05586 938 aa27.94■■■□□ 2.06
PVT1-219ENST00000523427 SMARCB1Q12824 385 aa27.94■■■□□ 2.06
PVT1-219ENST00000523427 PSMD2Q13200 908 aa27.94■■■□□ 2.06
PVT1-219ENST00000523427 DDR2Q16832 855 aa27.94■■■□□ 2.06
PVT1-219ENST00000523427 SLFN12LQ6IEE8 588 aa27.94■■■□□ 2.06
PVT1-219ENST00000523427 EFCAB13Q8IY85 973 aa27.94■■■□□ 2.06
PVT1-219ENST00000523427 USP24Q9UPU5 2620 aa27.93■■■□□ 2.06
PVT1-219ENST00000523427 LIMK1P53667 647 aa27.93■■■□□ 2.06
PVT1-219ENST00000523427 AMPD2Q01433 879 aa27.93■■■□□ 2.06
PVT1-219ENST00000523427 SV2CQ496J9 727 aa27.93■■■□□ 2.06
PVT1-219ENST00000523427 TCEAL6Q6IPX3 200 aa27.93■■■□□ 2.06
PVT1-219ENST00000523427 POMGNT1Q8WZA1 660 aa27.93■■■□□ 2.06
PVT1-219ENST00000523427 TCEAL3Q969E4 200 aa27.93■■■□□ 2.06
PVT1-219ENST00000523427 P2RY13Q9BPV8 354 aa27.93■■■□□ 2.06
PVT1-219ENST00000523427 ZMYM5Q9UJ78 669 aa27.93■■■□□ 2.06
PVT1-219ENST00000523427 SPAG17Q6Q759 2223 aa27.93■■■□□ 2.06
PVT1-219ENST00000523427 DCLK1O15075 740 aa27.92■■■□□ 2.06
PVT1-219ENST00000523427 CSH1P0DML2 217 aa27.92■■■□□ 2.06
PVT1-219ENST00000523427 CSH2P0DML3 217 aa27.92■■■□□ 2.06
PVT1-219ENST00000523427 ACAT1P24752 427 aaKnown RBP27.92■■■□□ 2.06
PVT1-219ENST00000523427 DDX6P26196 483 aaKnown RBP eCLIP27.92■■■□□ 2.06
PVT1-219ENST00000523427 MPLP40238 635 aa27.92■■■□□ 2.06
PVT1-219ENST00000523427 TFAMQ00059 246 aaKnown RBP27.92■■■□□ 2.06
PVT1-219ENST00000523427 MON1AQ86VX9 555 aa27.92■■■□□ 2.06
PVT1-219ENST00000523427 RPLP0P6Q8NHW5 317 aa27.92■■■□□ 2.06
PVT1-219ENST00000523427 CCDC163A0A0D9SF12 145 aa27.91■■■□□ 2.06
PVT1-219ENST00000523427 CRELD2Q6UXH1 353 aaPredicted RBP27.91■■■□□ 2.06
PVT1-219ENST00000523427 DYMQ7RTS9 669 aa27.91■■■□□ 2.06
PVT1-219ENST00000523427 CYP2S1Q96SQ9 504 aa27.91■■■□□ 2.06
PVT1-219ENST00000523427 KIF9Q9HAQ2 790 aa27.91■■■□□ 2.06
PVT1-219ENST00000523427 INVSQ9Y283 1065 aa27.91■■■□□ 2.06
PVT1-219ENST00000523427 GREB1Q4ZG55 1949 aa27.9■■■□□ 2.06
PVT1-219ENST00000523427 ZNF638Q14966 1978 aaKnown RBP27.9■■■□□ 2.06
PVT1-219ENST00000523427 TM4SF5O14894 197 aa27.9■■■□□ 2.06
PVT1-219ENST00000523427 SLC26A4O43511 780 aa27.9■■■□□ 2.06
PVT1-219ENST00000523427 DRD1P21728 446 aa27.9■■■□□ 2.06
PVT1-219ENST00000523427 CYP2F1P24903 491 aa27.9■■■□□ 2.06
PVT1-219ENST00000523427 POLR2BP30876 1174 aaKnown RBP27.9■■■□□ 2.06
PVT1-219ENST00000523427 GJA4P35212 333 aa27.9■■■□□ 2.06
PVT1-219ENST00000523427 MTF1Q14872 753 aa27.9■■■□□ 2.06
PVT1-219ENST00000523427 PDGFRLQ15198 375 aa27.9■■■□□ 2.06
PVT1-219ENST00000523427 PLK5Q496M5 336 aa27.9■■■□□ 2.06
PVT1-219ENST00000523427 RNF43Q68DV7 783 aa27.9■■■□□ 2.06
PVT1-219ENST00000523427 SFR1Q86XK3 245 aa27.9■■■□□ 2.06
PVT1-219ENST00000523427 PDCL2Q8N4E4 241 aa27.9■■■□□ 2.06
PVT1-219ENST00000523427 CAMKK1Q8N5S9 505 aa27.9■■■□□ 2.06
PVT1-219ENST00000523427 KRI1Q8N9T8 703 aaKnown RBP27.9■■■□□ 2.06
PVT1-219ENST00000523427 LARP4BQ92615 738 aaKnown RBP27.9■■■□□ 2.06
PVT1-219ENST00000523427 FAM84AQ96KN4 292 aa27.9■■■□□ 2.06
PVT1-219ENST00000523427 ZNF560Q96MR9 790 aa27.9■■■□□ 2.06
PVT1-219ENST00000523427 FAM213AQ9BRX8 229 aa27.9■■■□□ 2.06
PVT1-219ENST00000523427 CCSER1Q9C0I3 900 aa27.9■■■□□ 2.06
PVT1-219ENST00000523427 DUS2Q9NX74 493 aaKnown RBP27.9■■■□□ 2.06
PVT1-219ENST00000523427 AGAP1Q9UPQ3 857 aa27.9■■■□□ 2.06
PVT1-219ENST00000523427 WNT6Q9Y6F9 365 aa27.9■■■□□ 2.06
PVT1-219ENST00000523427 TCHHQ07283 1943 aa27.9■■■□□ 2.06
PVT1-219ENST00000523427 CKMP06732 381 aa27.89■■■□□ 2.06
PVT1-219ENST00000523427 PMLP29590 882 aa27.89■■■□□ 2.06
PVT1-219ENST00000523427 ABCD1P33897 745 aa27.89■■■□□ 2.06
PVT1-219ENST00000523427 CREB5Q02930 508 aa27.89■■■□□ 2.06
PVT1-219ENST00000523427 NFE2Q16621 373 aaPredicted RBP27.89■■■□□ 2.06
PVT1-219ENST00000523427 PLA2G2CQ5R387 149 aa27.89■■■□□ 2.06
PVT1-219ENST00000523427 CPA6Q8N4T0 437 aa27.89■■■□□ 2.06
PVT1-219ENST00000523427 NOC3LQ8WTT2 800 aaKnown RBP27.89■■■□□ 2.06
PVT1-219ENST00000523427 ECT2Q9H8V3 914 aa27.89■■■□□ 2.06
PVT1-219ENST00000523427 DDX43Q9NXZ2 648 aaKnown RBP27.89■■■□□ 2.06
PVT1-219ENST00000523427 TBC1D7Q9P0N9 293 aa27.89■■■□□ 2.06
PVT1-219ENST00000523427 PCDHGA5Q9Y5G8 931 aa27.89■■■□□ 2.06
PVT1-219ENST00000523427 ITGB3P05106 788 aa27.88■■■□□ 2.05
PVT1-219ENST00000523427 ADSSP30520 456 aa27.88■■■□□ 2.05
PVT1-219ENST00000523427 GBP1P32455 592 aa27.88■■■□□ 2.05
PVT1-219ENST00000523427 IFNAR2P48551 515 aa27.88■■■□□ 2.05
PVT1-219ENST00000523427 WNT7BP56706 349 aa27.88■■■□□ 2.05
PVT1-219ENST00000523427 CCDC142Q17RM4 750 aa27.88■■■□□ 2.05
PVT1-219ENST00000523427 SCN4BQ8IWT1 228 aa27.88■■■□□ 2.05
PVT1-219ENST00000523427 ZSWIM2Q8NEG5 633 aa27.88■■■□□ 2.05
PVT1-219ENST00000523427 SAAL1Q96ER3 474 aa27.88■■■□□ 2.05
PVT1-219ENST00000523427 TMX3Q96JJ7 454 aa27.88■■■□□ 2.05
PVT1-219ENST00000523427 ZC3H10Q96K80 434 aaKnown RBP27.88■■■□□ 2.05
PVT1-219ENST00000523427 SLC22A12Q96S37 553 aa27.88■■■□□ 2.05
PVT1-219ENST00000523427 DUSP15Q9H1R2 295 aaPredicted RBP27.88■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms