RNA–Protein interactions for RNA: ENST00000523013.1

CLK4-213, Transcript of CDC like kinase 4, humanhuman

TSL 2

Gene CLK4, Length 735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-213ENST00000523013 SP2Q02086 613 aa5□□□□□ -1.61
CLK4-213ENST00000523013 EXOSC9Q06265 439 aaKnown RBP5□□□□□ -1.61
CLK4-213ENST00000523013 GRM1Q13255 1194 aa5□□□□□ -1.61
CLK4-213ENST00000523013 EZH2Q15910 746 aaKnown RBP5□□□□□ -1.61
CLK4-213ENST00000523013 SRSF7Q16629 238 aaKnown RBP eCLIP5□□□□□ -1.61
CLK4-213ENST00000523013 PROSER3Q2NL68 480 aa5□□□□□ -1.61
CLK4-213ENST00000523013 PGS1Q32NB8 556 aa5□□□□□ -1.61
CLK4-213ENST00000523013 TEDDM1Q5T9Z0 273 aa5□□□□□ -1.61
CLK4-213ENST00000523013 ZNF66Q6ZN08 573 aa5□□□□□ -1.61
CLK4-213ENST00000523013 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5□□□□□ -1.61
CLK4-213ENST00000523013 FAM167AQ96KS9 214 aa5□□□□□ -1.61
CLK4-213ENST00000523013 SLC46A1Q96NT5 459 aa5□□□□□ -1.61
CLK4-213ENST00000523013 H0YIZ8 118 aa4.99□□□□□ -1.61
CLK4-213ENST00000523013 ERBB2P04626 1255 aa4.99□□□□□ -1.61
CLK4-213ENST00000523013 FAM163BP0C2L3 166 aa4.99□□□□□ -1.61
CLK4-213ENST00000523013 NDUFB7P17568 137 aa4.99□□□□□ -1.61
CLK4-213ENST00000523013 HDCP19113 662 aa4.99□□□□□ -1.61
CLK4-213ENST00000523013 LIPAP38571 399 aa4.99□□□□□ -1.61
CLK4-213ENST00000523013 PLS1Q14651 629 aa4.99□□□□□ -1.61
CLK4-213ENST00000523013 BRDTQ58F21 947 aaPredicted RBP4.99□□□□□ -1.61
CLK4-213ENST00000523013 EMC10Q5UCC4 262 aa4.99□□□□□ -1.61
CLK4-213ENST00000523013 CEP85Q6P2H3 762 aa4.99□□□□□ -1.61
CLK4-213ENST00000523013 ANKRD16Q6P6B7 361 aa4.99□□□□□ -1.61
CLK4-213ENST00000523013 TBC1D5Q92609 795 aa4.99□□□□□ -1.61
CLK4-213ENST00000523013 HSPBAP1Q96EW2 488 aa4.99□□□□□ -1.61
CLK4-213ENST00000523013 TTYH3Q9C0H2 523 aa4.99□□□□□ -1.61
CLK4-213ENST00000523013 DLL3Q9NYJ7 618 aa4.99□□□□□ -1.61
CLK4-213ENST00000523013 SERTAD3Q9UJW9 196 aa4.99□□□□□ -1.61
CLK4-213ENST00000523013 SSX2IPQ9Y2D8 614 aa4.99□□□□□ -1.61
CLK4-213ENST00000523013 LUC7L2Q9Y383 392 aaKnown RBP4.99□□□□□ -1.61
CLK4-213ENST00000523013 ZNF804BA4D1E1 1349 aa4.98□□□□□ -1.61
CLK4-213ENST00000523013 SLC16A3O15427 465 aaKnown RBP4.98□□□□□ -1.61
CLK4-213ENST00000523013 JTBO76095 146 aa4.98□□□□□ -1.61
CLK4-213ENST00000523013 IL33O95760 270 aa4.98□□□□□ -1.61
CLK4-213ENST00000523013 IL6RP08887 468 aaPredicted RBP4.98□□□□□ -1.61
CLK4-213ENST00000523013 PRR35P0CG20 571 aa4.98□□□□□ -1.61
CLK4-213ENST00000523013 ALDH9A1P49189 494 aa4.98□□□□□ -1.61
CLK4-213ENST00000523013 CLCN2P51788 898 aa4.98□□□□□ -1.61
CLK4-213ENST00000523013 LONRF3Q496Y0 759 aa4.98□□□□□ -1.61
CLK4-213ENST00000523013 MTX3Q5HYI7 312 aa4.98□□□□□ -1.61
CLK4-213ENST00000523013 AARS2Q5JTZ9 985 aaKnown RBP4.98□□□□□ -1.61
CLK4-213ENST00000523013 ICE2Q659A1 982 aa4.98□□□□□ -1.61
CLK4-213ENST00000523013 SFRP4Q6FHJ7 346 aaPredicted RBP4.98□□□□□ -1.61
CLK4-213ENST00000523013 BRIX1Q8TDN6 353 aaKnown RBP4.98□□□□□ -1.61
CLK4-213ENST00000523013 MVB12AQ96EY5 273 aa4.98□□□□□ -1.61
CLK4-213ENST00000523013 SLC35A4Q96G79 324 aa4.98□□□□□ -1.61
CLK4-213ENST00000523013 WDR26Q9H7D7 661 aa4.98□□□□□ -1.61
CLK4-213ENST00000523013 SH3BP4Q9P0V3 963 aa4.98□□□□□ -1.61
CLK4-213ENST00000523013 TISP43B9A030 160 aa4.97□□□□□ -1.61
CLK4-213ENST00000523013 H3BUI4 141 aa4.97□□□□□ -1.61
CLK4-213ENST00000523013 TLR5O60602 858 aa4.97□□□□□ -1.61
CLK4-213ENST00000523013 PPIFP30405 207 aaKnown RBP4.97□□□□□ -1.61
CLK4-213ENST00000523013 SOX8P57073 446 aa4.97□□□□□ -1.61
CLK4-213ENST00000523013 LOXL3P58215 753 aa4.97□□□□□ -1.61
CLK4-213ENST00000523013 LILRA4P59901 499 aa4.97□□□□□ -1.61
CLK4-213ENST00000523013 SLC44A4Q53GD3 710 aa4.97□□□□□ -1.61
CLK4-213ENST00000523013 TREML2Q5T2D2 321 aa4.97□□□□□ -1.61
CLK4-213ENST00000523013 LCE1AQ5T7P2 110 aa4.97□□□□□ -1.61
CLK4-213ENST00000523013 ZNF626Q68DY1 528 aa4.97□□□□□ -1.61
CLK4-213ENST00000523013 SLC29A4Q7RTT9 530 aa4.97□□□□□ -1.61
CLK4-213ENST00000523013 WDR53Q7Z5U6 358 aaPredicted RBP4.97□□□□□ -1.61
CLK4-213ENST00000523013 CELF5Q8N6W0 485 aaKnown RBP4.97□□□□□ -1.61
CLK4-213ENST00000523013 Q8N9P0 234 aaPredicted RBP4.97□□□□□ -1.61
CLK4-213ENST00000523013 PCSK9Q8NBP7 692 aaKnown RBP4.97□□□□□ -1.61
CLK4-213ENST00000523013 CHMP4CQ96CF2 233 aa4.97□□□□□ -1.61
CLK4-213ENST00000523013 TCF7L1Q9HCS4 588 aa4.97□□□□□ -1.61
CLK4-213ENST00000523013 SH2B3Q9UQQ2 575 aa4.97□□□□□ -1.61
CLK4-213ENST00000523013 TP73O15350 636 aa4.96□□□□□ -1.62
CLK4-213ENST00000523013 UNC5CO95185 931 aa4.96□□□□□ -1.62
CLK4-213ENST00000523013 ALDH2P05091 517 aa4.96□□□□□ -1.62
CLK4-213ENST00000523013 ATXN1LP0C7T5 689 aaKnown RBP4.96□□□□□ -1.62
CLK4-213ENST00000523013 AKAP5P24588 427 aa4.96□□□□□ -1.62
CLK4-213ENST00000523013 EPHB2P29323 1055 aa4.96□□□□□ -1.62
CLK4-213ENST00000523013 CYP2C18P33260 490 aa4.96□□□□□ -1.62
CLK4-213ENST00000523013 EEFSECP57772 596 aaKnown RBP4.96□□□□□ -1.62
CLK4-213ENST00000523013 C11orf87Q6NUJ2 197 aa4.96□□□□□ -1.62
CLK4-213ENST00000523013 ZBTB46Q86UZ6 589 aa4.96□□□□□ -1.62
CLK4-213ENST00000523013 FANCBQ8NB91 859 aa4.96□□□□□ -1.62
CLK4-213ENST00000523013 PLBD2Q8NHP8 589 aa4.96□□□□□ -1.62
CLK4-213ENST00000523013 ATG4AQ8WYN0 398 aa4.96□□□□□ -1.62
CLK4-213ENST00000523013 PTDSS2Q9BVG9 487 aa4.96□□□□□ -1.62
CLK4-213ENST00000523013 SEMA4CQ9C0C4 833 aa4.96□□□□□ -1.62
CLK4-213ENST00000523013 HOMER2Q9NSB8 354 aa4.96□□□□□ -1.62
CLK4-213ENST00000523013 PCDHA6Q9UN73 950 aa4.96□□□□□ -1.62
CLK4-213ENST00000523013 ONECUT2O95948 504 aa4.95□□□□□ -1.62
CLK4-213ENST00000523013 KELP23276 732 aa4.95□□□□□ -1.62
CLK4-213ENST00000523013 MPGP29372 298 aa4.95□□□□□ -1.62
CLK4-213ENST00000523013 PXNP49023 591 aaPredicted RBP4.95□□□□□ -1.62
CLK4-213ENST00000523013 IQCB1Q15051 598 aa4.95□□□□□ -1.62
CLK4-213ENST00000523013 ATAT1Q5SQI0 421 aa4.95□□□□□ -1.62
CLK4-213ENST00000523013 ARHGAP40Q5TG30 622 aa4.95□□□□□ -1.62
CLK4-213ENST00000523013 PRAMEF17Q5VTA0 474 aa4.95□□□□□ -1.62
CLK4-213ENST00000523013 LAYNQ6UX15 382 aa4.95□□□□□ -1.62
CLK4-213ENST00000523013 ZNF804AQ7Z570 1209 aa4.95□□□□□ -1.62
CLK4-213ENST00000523013 NEK8Q86SG6 692 aa4.95□□□□□ -1.62
CLK4-213ENST00000523013 HPS3Q969F9 1004 aa4.95□□□□□ -1.62
CLK4-213ENST00000523013 CDK5RAP3Q96JB5 506 aa4.95□□□□□ -1.62
CLK4-213ENST00000523013 NUP88Q99567 741 aaPredicted RBP4.95□□□□□ -1.62
CLK4-213ENST00000523013 DUSP22Q9NRW4 184 aa4.95□□□□□ -1.62
CLK4-213ENST00000523013 PLEKHM1Q9Y4G2 1056 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms