RNA–Protein interactions for RNA: ENST00000522963.5

PVT1-215, Transcript of Pvt1 oncogene, humanhuman

TSL 4

Gene PVT1, Length 568 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-215ENST00000522963 GABRDO14764 452 aa12.72□□□□□ -0.37
PVT1-215ENST00000522963 ADAM12O43184 909 aa12.72□□□□□ -0.37
PVT1-215ENST00000522963 MBTPS2O43462 519 aa12.72□□□□□ -0.37
PVT1-215ENST00000522963 HCRTO43612 131 aa12.72□□□□□ -0.37
PVT1-215ENST00000522963 CASP14P31944 242 aa12.72□□□□□ -0.37
PVT1-215ENST00000522963 OR1D2P34982 312 aa12.72□□□□□ -0.37
PVT1-215ENST00000522963 CLCN4P51793 760 aa12.72□□□□□ -0.37
PVT1-215ENST00000522963 JAM2P57087 298 aa12.72□□□□□ -0.37
PVT1-215ENST00000522963 YWHAEP62258 255 aaKnown RBP12.72□□□□□ -0.37
PVT1-215ENST00000522963 CREMQ03060 361 aa12.72□□□□□ -0.37
PVT1-215ENST00000522963 GOLGA8FQ08AF8 430 aa12.72□□□□□ -0.37
PVT1-215ENST00000522963 GOLGA8DPQ0D2H9 430 aa12.72□□□□□ -0.37
PVT1-215ENST00000522963 INCA1Q0VD86 236 aa12.72□□□□□ -0.37
PVT1-215ENST00000522963 SMAD4Q13485 552 aaKnown RBP12.72□□□□□ -0.37
PVT1-215ENST00000522963 KCNC3Q14003 757 aa12.72□□□□□ -0.37
PVT1-215ENST00000522963 TRIM14Q14142 442 aa12.72□□□□□ -0.37
PVT1-215ENST00000522963 PUS10Q3MIT2 529 aaKnown RBP12.72□□□□□ -0.37
PVT1-215ENST00000522963 VARS2Q5ST30 1063 aaKnown RBP12.72□□□□□ -0.37
PVT1-215ENST00000522963 PDXDC1Q6P996 788 aa12.72□□□□□ -0.37
PVT1-215ENST00000522963 SYCE2Q6PIF2 218 aa12.72□□□□□ -0.37
PVT1-215ENST00000522963 ANKS3Q6ZW76 656 aa12.72□□□□□ -0.37
PVT1-215ENST00000522963 CACNA2D4Q7Z3S7 1137 aa12.72□□□□□ -0.37
PVT1-215ENST00000522963 DRC7Q8IY82 874 aa12.72□□□□□ -0.37
PVT1-215ENST00000522963 TMEM86AQ8N2M4 240 aa12.72□□□□□ -0.37
PVT1-215ENST00000522963 SPC24Q8NBT2 197 aa12.72□□□□□ -0.37
PVT1-215ENST00000522963 OR6B3Q8NGW1 331 aa12.72□□□□□ -0.37
PVT1-215ENST00000522963 WHAMMQ8TF30 809 aa12.72□□□□□ -0.37
PVT1-215ENST00000522963 JAKMIP2Q96AA8 810 aa12.72□□□□□ -0.37
PVT1-215ENST00000522963 IQCDQ96DY2 449 aa12.72□□□□□ -0.37
PVT1-215ENST00000522963 MSLNLQ96KJ4 702 aa12.72□□□□□ -0.37
PVT1-215ENST00000522963 TWNKQ96RR1 684 aa12.72□□□□□ -0.37
PVT1-215ENST00000522963 RTP3Q9BQQ7 232 aa12.72□□□□□ -0.37
PVT1-215ENST00000522963 CLSTN3Q9BQT9 956 aa12.72□□□□□ -0.37
PVT1-215ENST00000522963 SNX25Q9H3E2 840 aa12.72□□□□□ -0.37
PVT1-215ENST00000522963 MAN1C1Q9NR34 630 aa12.72□□□□□ -0.37
PVT1-215ENST00000522963 FNIP2Q9P278 1114 aa12.72□□□□□ -0.37
PVT1-215ENST00000522963 HMGXB4Q9UGU5 601 aa12.72□□□□□ -0.37
PVT1-215ENST00000522963 CDH22Q9UJ99 828 aa12.72□□□□□ -0.37
PVT1-215ENST00000522963 DSEQ9UL01 958 aa12.72□□□□□ -0.37
PVT1-215ENST00000522963 CAPN11Q9UMQ6 739 aa12.72□□□□□ -0.37
PVT1-215ENST00000522963 FAM50BQ9Y247 325 aa12.72□□□□□ -0.37
PVT1-215ENST00000522963 USP15Q9Y4E8 981 aaPredicted RBP12.72□□□□□ -0.37
PVT1-215ENST00000522963 PCDHB4Q9Y5E5 795 aa12.72□□□□□ -0.37
PVT1-215ENST00000522963 CDY1Q9Y6F8 540 aa12.72□□□□□ -0.37
PVT1-215ENST00000522963 MTCL1Q9Y4B5 1905 aaKnown RBP12.72□□□□□ -0.37
PVT1-215ENST00000522963 F8VZ95 297 aa12.71□□□□□ -0.37
PVT1-215ENST00000522963 H7C4K7 107 aa12.71□□□□□ -0.37
PVT1-215ENST00000522963 TGM5O43548 720 aa12.71□□□□□ -0.37
PVT1-215ENST00000522963 CILPO75339 1184 aa12.71□□□□□ -0.37
PVT1-215ENST00000522963 LMO2P25791 158 aa12.71□□□□□ -0.37
PVT1-215ENST00000522963 GNL1P36915 607 aaPredicted RBP12.71□□□□□ -0.37
PVT1-215ENST00000522963 LHX1P48742 406 aa12.71□□□□□ -0.37
PVT1-215ENST00000522963 NDST1P52848 882 aa12.71□□□□□ -0.37
PVT1-215ENST00000522963 YWHAHQ04917 246 aaPredicted RBP12.71□□□□□ -0.37
PVT1-215ENST00000522963 ORC1Q13415 861 aa12.71□□□□□ -0.37
PVT1-215ENST00000522963 MRPL58Q14197 206 aaKnown RBP12.71□□□□□ -0.37
PVT1-215ENST00000522963 CTXN3Q4LDR2 81 aa12.71□□□□□ -0.37
PVT1-215ENST00000522963 OVOS1Q6IE37 1185 aa12.71□□□□□ -0.37
PVT1-215ENST00000522963 TMEM270Q6UE05 265 aa12.71□□□□□ -0.37
PVT1-215ENST00000522963 TMC5Q6UXY8 1006 aa12.71□□□□□ -0.37
PVT1-215ENST00000522963 TMEM184AQ6ZMB5 413 aa12.71□□□□□ -0.37
PVT1-215ENST00000522963 METTL23Q86XA0 190 aa12.71□□□□□ -0.37
PVT1-215ENST00000522963 GPIHBP1Q8IV16 184 aa12.71□□□□□ -0.37
PVT1-215ENST00000522963 FAM71AQ8IYT1 594 aa12.71□□□□□ -0.37
PVT1-215ENST00000522963 SMRP1Q8NCR6 262 aa12.71□□□□□ -0.37
PVT1-215ENST00000522963 SPATA18Q8TC71 538 aa12.71□□□□□ -0.37
PVT1-215ENST00000522963 SPAG5Q96R06 1193 aa12.71□□□□□ -0.37
PVT1-215ENST00000522963 UHRF1Q96T88 793 aaPredicted RBP12.71□□□□□ -0.37
PVT1-215ENST00000522963 COL25A1Q9BXS0 654 aaPredicted RBP12.71□□□□□ -0.37
PVT1-215ENST00000522963 ELOVL4Q9GZR5 314 aa12.71□□□□□ -0.37
PVT1-215ENST00000522963 FAM124BQ9H5Z6 455 aaPredicted RBP12.71□□□□□ -0.37
PVT1-215ENST00000522963 DZANK1Q9NVP4 752 aa12.71□□□□□ -0.37
PVT1-215ENST00000522963 DDX43Q9NXZ2 648 aaKnown RBP12.71□□□□□ -0.37
PVT1-215ENST00000522963 MTRRQ9UBK8 725 aa12.71□□□□□ -0.37
PVT1-215ENST00000522963 CNTN6Q9UQ52 1028 aa12.71□□□□□ -0.37
PVT1-215ENST00000522963 LUC7L2Q9Y383 392 aaKnown RBP12.71□□□□□ -0.37
PVT1-215ENST00000522963 LRRC53A6NM62 1247 aa12.7□□□□□ -0.38
PVT1-215ENST00000522963 A8MXQ7 604 aa12.7□□□□□ -0.38
PVT1-215ENST00000522963 MFAP3LO75121 409 aa12.7□□□□□ -0.38
PVT1-215ENST00000522963 OAZ2O95190 189 aa12.7□□□□□ -0.38
PVT1-215ENST00000522963 PDGFRBP09619 1106 aa12.7□□□□□ -0.38
PVT1-215ENST00000522963 KRT5P13647 590 aa12.7□□□□□ -0.38
PVT1-215ENST00000522963 HOXB8P17481 243 aaPredicted RBP12.7□□□□□ -0.38
PVT1-215ENST00000522963 SP100P23497 879 aaPredicted RBP12.7□□□□□ -0.38
PVT1-215ENST00000522963 ACAT1P24752 427 aaKnown RBP12.7□□□□□ -0.38
PVT1-215ENST00000522963 SSTR3P32745 418 aaPredicted RBP12.7□□□□□ -0.38
PVT1-215ENST00000522963 KRT9P35527 623 aa12.7□□□□□ -0.38
PVT1-215ENST00000522963 SOX5P35711 763 aa12.7□□□□□ -0.38
PVT1-215ENST00000522963 USP8P40818 1118 aa12.7□□□□□ -0.38
PVT1-215ENST00000522963 STAT1P42224 750 aa12.7□□□□□ -0.38
PVT1-215ENST00000522963 ZNF132P52740 706 aa12.7□□□□□ -0.38
PVT1-215ENST00000522963 RAD23BP54727 409 aa12.7□□□□□ -0.38
PVT1-215ENST00000522963 ZBED6P86452 979 aa12.7□□□□□ -0.38
PVT1-215ENST00000522963 ZNF394Q53GI3 561 aa12.7□□□□□ -0.38
PVT1-215ENST00000522963 E4F1Q66K89 784 aaPredicted RBP12.7□□□□□ -0.38
PVT1-215ENST00000522963 ZNF280DQ6N043 979 aa12.7□□□□□ -0.38
PVT1-215ENST00000522963 CES5AQ6NT32 575 aa12.7□□□□□ -0.38
PVT1-215ENST00000522963 ELMSAN1Q6PJG2 1045 aa12.7□□□□□ -0.38
PVT1-215ENST00000522963 RSPO2Q6UXX9 243 aaPredicted RBP12.7□□□□□ -0.38
PVT1-215ENST00000522963 UNC93AQ86WB7 457 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms