RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 MTF2Q9Y483 593 aaPredicted RBP7.18□□□□□ -1.26
VPS13B-211ENST00000522802 PCDHGA2Q9Y5H1 932 aa7.18□□□□□ -1.26
VPS13B-211ENST00000522802 IRAK3Q9Y616 596 aa7.18□□□□□ -1.26
VPS13B-211ENST00000522802 DMXL2Q8TDJ6 3036 aa7.18□□□□□ -1.26
VPS13B-211ENST00000522802 FREM2Q5SZK8 3169 aa7.17□□□□□ -1.26
VPS13B-211ENST00000522802 DOCK6Q96HP0 2047 aa7.17□□□□□ -1.26
VPS13B-211ENST00000522802 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.17□□□□□ -1.26
VPS13B-211ENST00000522802 ZNF213O14771 459 aa7.17□□□□□ -1.26
VPS13B-211ENST00000522802 CBFA2T2O43439 604 aa7.17□□□□□ -1.26
VPS13B-211ENST00000522802 SIGLEC6O43699 453 aa7.17□□□□□ -1.26
VPS13B-211ENST00000522802 GPR32O75388 356 aa7.17□□□□□ -1.26
VPS13B-211ENST00000522802 CNPP09543 421 aaKnown RBP7.17□□□□□ -1.26
VPS13B-211ENST00000522802 CD247P20963 164 aa7.17□□□□□ -1.26
VPS13B-211ENST00000522802 TPP2P29144 1249 aaPredicted RBP7.17□□□□□ -1.26
VPS13B-211ENST00000522802 ACTR2P61160 394 aa7.17□□□□□ -1.26
VPS13B-211ENST00000522802 CSTF1Q05048 431 aaKnown RBP7.17□□□□□ -1.26
VPS13B-211ENST00000522802 HTR4Q13639 388 aa7.17□□□□□ -1.26
VPS13B-211ENST00000522802 GRM4Q14833 912 aa7.17□□□□□ -1.26
VPS13B-211ENST00000522802 LPAL2Q16609 132 aa7.17□□□□□ -1.26
VPS13B-211ENST00000522802 UBE2SQ16763 222 aa7.17□□□□□ -1.26
VPS13B-211ENST00000522802 CCDC178Q5BJE1 867 aa7.17□□□□□ -1.26
VPS13B-211ENST00000522802 VHLLQ6RSH7 139 aa7.17□□□□□ -1.26
VPS13B-211ENST00000522802 ZNF574Q6ZN55 896 aaPredicted RBP7.17□□□□□ -1.26
VPS13B-211ENST00000522802 C15orf39Q6ZRI6 1047 aa7.17□□□□□ -1.26
VPS13B-211ENST00000522802 NME8Q8N427 588 aa7.17□□□□□ -1.26
VPS13B-211ENST00000522802 DAGLBQ8NCG7 672 aa7.17□□□□□ -1.26
VPS13B-211ENST00000522802 ZBTB44Q8NCP5 570 aa7.17□□□□□ -1.26
VPS13B-211ENST00000522802 HNRNPLLQ8WVV9 542 aaKnown RBP7.17□□□□□ -1.26
VPS13B-211ENST00000522802 UBAC1Q9BSL1 405 aa7.17□□□□□ -1.26
VPS13B-211ENST00000522802 HDAC8Q9BY41 377 aa7.17□□□□□ -1.26
VPS13B-211ENST00000522802 AZI2Q9H6S1 392 aa7.17□□□□□ -1.26
VPS13B-211ENST00000522802 MAN1C1Q9NR34 630 aa7.17□□□□□ -1.26
VPS13B-211ENST00000522802 ASH1LQ9NR48 2969 aaKnown RBP7.17□□□□□ -1.26
VPS13B-211ENST00000522802 SLC9A2Q9UBY0 812 aa7.17□□□□□ -1.26
VPS13B-211ENST00000522802 FBXO4Q9UKT5 387 aa7.17□□□□□ -1.26
VPS13B-211ENST00000522802 ANGPTL2Q9UKU9 493 aa7.17□□□□□ -1.26
VPS13B-211ENST00000522802 ZNF451Q9Y4E5 1061 aa7.17□□□□□ -1.26
VPS13B-211ENST00000522802 UBIAD1Q9Y5Z9 338 aa7.17□□□□□ -1.26
VPS13B-211ENST00000522802 NUMBLQ9Y6R0 609 aa7.17□□□□□ -1.26
VPS13B-211ENST00000522802 WDR81Q562E7 1941 aa7.17□□□□□ -1.26
VPS13B-211ENST00000522802 SMG1Q96Q15 3661 aaKnown RBP7.16□□□□□ -1.26
VPS13B-211ENST00000522802 COL4A2P08572 1712 aa7.16□□□□□ -1.26
VPS13B-211ENST00000522802 ANHXE9PGG2 379 aa7.16□□□□□ -1.26
VPS13B-211ENST00000522802 SLC30A4O14863 429 aa7.16□□□□□ -1.26
VPS13B-211ENST00000522802 PAX4O43316 350 aa7.16□□□□□ -1.26
VPS13B-211ENST00000522802 LAMTOR5O43504 91 aa7.16□□□□□ -1.26
VPS13B-211ENST00000522802 RFPL2O75678 378 aa7.16□□□□□ -1.26
VPS13B-211ENST00000522802 C22orf31O95567 290 aa7.16□□□□□ -1.26
VPS13B-211ENST00000522802 ESR1P03372 595 aa7.16□□□□□ -1.26
VPS13B-211ENST00000522802 FGFR4P22455 802 aa7.16□□□□□ -1.26
VPS13B-211ENST00000522802 PMLP29590 882 aa7.16□□□□□ -1.26
VPS13B-211ENST00000522802 ALDH7A1P49419 539 aaKnown RBP7.16□□□□□ -1.26
VPS13B-211ENST00000522802 STAT5BP51692 787 aa7.16□□□□□ -1.26
VPS13B-211ENST00000522802 CRYBB1P53674 252 aaPredicted RBP7.16□□□□□ -1.26
VPS13B-211ENST00000522802 POLGP54098 1239 aaPredicted RBP7.16□□□□□ -1.26
VPS13B-211ENST00000522802 STARD6P59095 220 aa7.16□□□□□ -1.26
VPS13B-211ENST00000522802 ITGB3BPQ13352 177 aaPredicted RBP7.16□□□□□ -1.26
VPS13B-211ENST00000522802 RAB33AQ14088 237 aa7.16□□□□□ -1.26
VPS13B-211ENST00000522802 NCAPHQ15003 741 aa7.16□□□□□ -1.26
VPS13B-211ENST00000522802 FXNQ16595 210 aa7.16□□□□□ -1.26
VPS13B-211ENST00000522802 LONRF3Q496Y0 759 aa7.16□□□□□ -1.26
VPS13B-211ENST00000522802 KIAA1211LQ6NV74 962 aa7.16□□□□□ -1.26
VPS13B-211ENST00000522802 CYB5R4Q7L1T6 521 aa7.16□□□□□ -1.26
VPS13B-211ENST00000522802 GET4Q7L5D6 327 aaPredicted RBP7.16□□□□□ -1.26
VPS13B-211ENST00000522802 PLPPR4Q7Z2D5 763 aa7.16□□□□□ -1.26
VPS13B-211ENST00000522802 DDX53Q86TM3 631 aaKnown RBP7.16□□□□□ -1.26
VPS13B-211ENST00000522802 CCDC60Q8IWA6 550 aaPredicted RBP7.16□□□□□ -1.26
VPS13B-211ENST00000522802 ATRIPQ8WXE1 791 aa7.16□□□□□ -1.26
VPS13B-211ENST00000522802 NELL1Q92832 810 aa7.16□□□□□ -1.26
VPS13B-211ENST00000522802 SECISBP2LQ93073 1101 aaKnown RBP7.16□□□□□ -1.26
VPS13B-211ENST00000522802 ZNF707Q96C28 371 aaPredicted RBP7.16□□□□□ -1.26
VPS13B-211ENST00000522802 IGSF21Q96ID5 467 aa7.16□□□□□ -1.26
VPS13B-211ENST00000522802 CDHR1Q96JP9 859 aa7.16□□□□□ -1.26
VPS13B-211ENST00000522802 ZNF668Q96K58 619 aaPredicted RBP7.16□□□□□ -1.26
VPS13B-211ENST00000522802 KLHL5Q96PQ7 755 aa7.16□□□□□ -1.26
VPS13B-211ENST00000522802 RPP25Q9BUL9 199 aaKnown RBP7.16□□□□□ -1.26
VPS13B-211ENST00000522802 GP6Q9HCN6 339 aa7.16□□□□□ -1.26
VPS13B-211ENST00000522802 WDR6Q9NNW5 1121 aaKnown RBP7.16□□□□□ -1.26
VPS13B-211ENST00000522802 SLC2A4RGQ9NR83 387 aa7.16□□□□□ -1.26
VPS13B-211ENST00000522802 ZSCAN32Q9NX65 697 aa7.16□□□□□ -1.26
VPS13B-211ENST00000522802 DNAJB4Q9UDY4 337 aa7.16□□□□□ -1.26
VPS13B-211ENST00000522802 SUSD2Q9UGT4 822 aa7.16□□□□□ -1.26
VPS13B-211ENST00000522802 MYH9P35579 1960 aaKnown RBP7.15□□□□□ -1.26
VPS13B-211ENST00000522802 RALGAPA1Q6GYQ0 2036 aa7.15□□□□□ -1.26
VPS13B-211ENST00000522802 CCER2I3L3R5 266 aa7.15□□□□□ -1.26
VPS13B-211ENST00000522802 INPPL1O15357 1258 aa7.15□□□□□ -1.26
VPS13B-211ENST00000522802 PRAMEF1O95521 474 aa7.15□□□□□ -1.26
VPS13B-211ENST00000522802 CCNE2O96020 404 aa7.15□□□□□ -1.26
VPS13B-211ENST00000522802 NCLP19338 710 aaKnown RBP7.15□□□□□ -1.26
VPS13B-211ENST00000522802 CD72P21854 359 aa7.15□□□□□ -1.26
VPS13B-211ENST00000522802 FUT4P22083 530 aa7.15□□□□□ -1.26
VPS13B-211ENST00000522802 KLRC2P26717 231 aa7.15□□□□□ -1.26
VPS13B-211ENST00000522802 SLC11A1P49279 550 aa7.15□□□□□ -1.26
VPS13B-211ENST00000522802 CLCN3P51790 818 aa7.15□□□□□ -1.26
VPS13B-211ENST00000522802 IKZF1Q13422 519 aa7.15□□□□□ -1.26
VPS13B-211ENST00000522802 GIT2Q14161 759 aa7.15□□□□□ -1.26
VPS13B-211ENST00000522802 UBXN2BQ14CS0 331 aa7.15□□□□□ -1.26
VPS13B-211ENST00000522802 NONOQ15233 471 aaKnown RBP eCLIP7.15□□□□□ -1.26
VPS13B-211ENST00000522802 CLEC16AQ2KHT3 1053 aa7.15□□□□□ -1.26
VPS13B-211ENST00000522802 ODR4Q5SWX8 454 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms