RNA–Protein interactions for RNA: ENST00000522353.2

PCDHA3-201, Transcript of protocadherin alpha 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA3, Length 5,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-201ENST00000522353 COMTP21964 271 aa16.95■□□□□ 0.3
PCDHA3-201ENST00000522353 MTMR12Q9C0I1 747 aa16.95■□□□□ 0.3
PCDHA3-201ENST00000522353 YY1AP1Q9H869 796 aa16.95■□□□□ 0.3
PCDHA3-201ENST00000522353 CGRRF1Q99675 332 aa16.95■□□□□ 0.3
PCDHA3-201ENST00000522353 TRABDQ9H4I3 376 aa16.95■□□□□ 0.3
PCDHA3-201ENST00000522353 SLC25A13Q9UJS0 675 aa16.95■□□□□ 0.3
PCDHA3-201ENST00000522353 TRIM17Q9Y577 477 aa16.95■□□□□ 0.3
PCDHA3-201ENST00000522353 HEATR9A2RTY3 570 aa16.94■□□□□ 0.3
PCDHA3-201ENST00000522353 USP27XA6NNY8 438 aa16.94■□□□□ 0.3
PCDHA3-201ENST00000522353 C5orf58C9J3I9 102 aa16.94■□□□□ 0.3
PCDHA3-201ENST00000522353 CENPCQ03188 943 aa16.94■□□□□ 0.3
PCDHA3-201ENST00000522353 NR1I3Q14994 352 aa16.94■□□□□ 0.3
PCDHA3-201ENST00000522353 ZRANB3Q5FWF4 1079 aa16.94■□□□□ 0.3
PCDHA3-201ENST00000522353 OR9Q1Q8NGQ5 310 aa16.94■□□□□ 0.3
PCDHA3-201ENST00000522353 CYP3A43Q9HB55 503 aa16.94■□□□□ 0.3
PCDHA3-201ENST00000522353 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.94■□□□□ 0.3
PCDHA3-201ENST00000522353 MST1RQ04912 1400 aa16.94■□□□□ 0.3
PCDHA3-201ENST00000522353 MED24O75448 989 aa16.94■□□□□ 0.3
PCDHA3-201ENST00000522353 KPNA1P52294 538 aaPredicted RBP16.94■□□□□ 0.3
PCDHA3-201ENST00000522353 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.94■□□□□ 0.3
PCDHA3-201ENST00000522353 DEFB128Q7Z7B8 93 aa16.94■□□□□ 0.3
PCDHA3-201ENST00000522353 NLRP14Q86W24 1093 aa16.94■□□□□ 0.3
PCDHA3-201ENST00000522353 EMILIN2Q9BXX0 1053 aa16.94■□□□□ 0.3
PCDHA3-201ENST00000522353 GOLPH3Q9H4A6 298 aa16.94■□□□□ 0.3
PCDHA3-201ENST00000522353 AGO4Q9HCK5 861 aaKnown RBP16.94■□□□□ 0.3
PCDHA3-201ENST00000522353 TMEM39AQ9NV64 488 aa16.94■□□□□ 0.3
PCDHA3-201ENST00000522353 NR2E3Q9Y5X4 410 aa16.94■□□□□ 0.3
PCDHA3-201ENST00000522353 INO80Q9ULG1 1556 aaPredicted RBP16.94■□□□□ 0.3
PCDHA3-201ENST00000522353 ANGPT2O15123 496 aa16.94■□□□□ 0.3
PCDHA3-201ENST00000522353 MCF2P10911 925 aa16.94■□□□□ 0.3
PCDHA3-201ENST00000522353 ZNF200P98182 395 aaPredicted RBP16.94■□□□□ 0.3
PCDHA3-201ENST00000522353 GRB10Q13322 594 aa16.94■□□□□ 0.3
PCDHA3-201ENST00000522353 ACOT1Q86TX2 421 aa16.94■□□□□ 0.3
PCDHA3-201ENST00000522353 ERGIC2Q96RQ1 377 aa16.94■□□□□ 0.3
PCDHA3-201ENST00000522353 OSMRQ99650 979 aa16.94■□□□□ 0.3
PCDHA3-201ENST00000522353 RIOX1Q9H6W3 641 aa16.94■□□□□ 0.3
PCDHA3-201ENST00000522353 SPATS2LQ9NUQ6 558 aaKnown RBP16.94■□□□□ 0.3
PCDHA3-201ENST00000522353 CD274Q9NZQ7 290 aa16.94■□□□□ 0.3
PCDHA3-201ENST00000522353 ALG6Q9Y672 507 aa16.94■□□□□ 0.3
PCDHA3-201ENST00000522353 A0A087WZ62 844 aa16.94■□□□□ 0.3
PCDHA3-201ENST00000522353 CCDC78A2IDD5 438 aa16.94■□□□□ 0.3
PCDHA3-201ENST00000522353 CARNS1A5YM72 827 aa16.94■□□□□ 0.3
PCDHA3-201ENST00000522353 ALDH1A2O94788 518 aa16.94■□□□□ 0.3
PCDHA3-201ENST00000522353 HSPA9P38646 679 aaKnown RBP16.94■□□□□ 0.3
PCDHA3-201ENST00000522353 PRKCQQ04759 706 aa16.94■□□□□ 0.3
PCDHA3-201ENST00000522353 AMHR2Q16671 573 aa16.94■□□□□ 0.3
PCDHA3-201ENST00000522353 TMC2Q8TDI7 906 aa16.94■□□□□ 0.3
PCDHA3-201ENST00000522353 RIN2Q8WYP3 895 aaPredicted RBP16.94■□□□□ 0.3
PCDHA3-201ENST00000522353 FDXACB1Q9BRP7 624 aaPredicted RBP16.94■□□□□ 0.3
PCDHA3-201ENST00000522353 REREQ9P2R6 1566 aa16.94■□□□□ 0.3
PCDHA3-201ENST00000522353 VWA5AO00534 786 aa16.93■□□□□ 0.3
PCDHA3-201ENST00000522353 PFDN1O60925 122 aa16.93■□□□□ 0.3
PCDHA3-201ENST00000522353 AGTP01019 485 aa16.93■□□□□ 0.3
PCDHA3-201ENST00000522353 KRT4P19013 534 aa16.93■□□□□ 0.3
PCDHA3-201ENST00000522353 MTF1Q14872 753 aa16.93■□□□□ 0.3
PCDHA3-201ENST00000522353 KRT72Q14CN4 511 aa16.93■□□□□ 0.3
PCDHA3-201ENST00000522353 RASGRP2Q7LDG7 609 aa16.93■□□□□ 0.3
PCDHA3-201ENST00000522353 NAF1Q96HR8 494 aaKnown RBP16.93■□□□□ 0.3
PCDHA3-201ENST00000522353 IDI2Q9BXS1 227 aa16.93■□□□□ 0.3
PCDHA3-201ENST00000522353 MRPL9Q9BYD2 267 aaKnown RBP16.93■□□□□ 0.3
PCDHA3-201ENST00000522353 ZNF518BQ9C0D4 1074 aa16.93■□□□□ 0.3
PCDHA3-201ENST00000522353 SNX5Q9Y5X3 404 aa16.93■□□□□ 0.3
PCDHA3-201ENST00000522353 TNS2Q63HR2 1409 aa16.93■□□□□ 0.3
PCDHA3-201ENST00000522353 PQBP1O60828 265 aaKnown RBP16.93■□□□□ 0.3
PCDHA3-201ENST00000522353 INSRRP14616 1297 aa16.93■□□□□ 0.3
PCDHA3-201ENST00000522353 CHRM3P20309 590 aa16.93■□□□□ 0.3
PCDHA3-201ENST00000522353 STIP1P31948 543 aaKnown RBP16.93■□□□□ 0.3
PCDHA3-201ENST00000522353 GEMP55040 296 aa16.93■□□□□ 0.3
PCDHA3-201ENST00000522353 ACAD10Q6JQN1 1059 aa16.93■□□□□ 0.3
PCDHA3-201ENST00000522353 CBWD2Q8IUF1 395 aa16.93■□□□□ 0.3
PCDHA3-201ENST00000522353 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.93■□□□□ 0.3
PCDHA3-201ENST00000522353 GIMAP4Q9NUV9 329 aa16.93■□□□□ 0.3
PCDHA3-201ENST00000522353 LZTS3O60299 673 aaPredicted RBP16.93■□□□□ 0.3
PCDHA3-201ENST00000522353 FGFR4P22455 802 aa16.93■□□□□ 0.3
PCDHA3-201ENST00000522353 GRIK4Q16099 956 aa16.93■□□□□ 0.3
PCDHA3-201ENST00000522353 TMEM259Q4ZIN3 620 aa16.93■□□□□ 0.3
PCDHA3-201ENST00000522353 AP1ARQ63HQ0 302 aa16.93■□□□□ 0.3
PCDHA3-201ENST00000522353 TFB1MQ8WVM0 346 aaKnown RBP16.93■□□□□ 0.3
PCDHA3-201ENST00000522353 CYFIP2Q96F07 1278 aa16.93■□□□□ 0.3
PCDHA3-201ENST00000522353 CDK5RAP1Q96SZ6 601 aaKnown RBP16.93■□□□□ 0.3
PCDHA3-201ENST00000522353 CHST12Q9NRB3 414 aa16.93■□□□□ 0.3
PCDHA3-201ENST00000522353 SETD4Q9NVD3 440 aa16.93■□□□□ 0.3
PCDHA3-201ENST00000522353 C2orf81A6NN90 581 aa16.93■□□□□ 0.3
PCDHA3-201ENST00000522353 VGLL3A8MV65 326 aa16.93■□□□□ 0.3
PCDHA3-201ENST00000522353 SERPINB4P48594 390 aa16.93■□□□□ 0.3
PCDHA3-201ENST00000522353 GYS2P54840 703 aa16.93■□□□□ 0.3
PCDHA3-201ENST00000522353 AP2B1P63010 937 aa16.93■□□□□ 0.3
PCDHA3-201ENST00000522353 SEZ6Q53EL9 994 aa16.93■□□□□ 0.3
PCDHA3-201ENST00000522353 UGT3A1Q6NUS8 523 aa16.93■□□□□ 0.3
PCDHA3-201ENST00000522353 AKT1S1Q96B36 256 aa16.93■□□□□ 0.3
PCDHA3-201ENST00000522353 NR1H4Q96RI1 486 aaPredicted RBP16.93■□□□□ 0.3
PCDHA3-201ENST00000522353 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.93■□□□□ 0.3
PCDHA3-201ENST00000522353 RIMS1Q86UR5 1692 aaKnown RBP16.93■□□□□ 0.3
PCDHA3-201ENST00000522353 SYCE1LA8MT33 242 aa16.92■□□□□ 0.3
PCDHA3-201ENST00000522353 H0Y3Z8 333 aa16.92■□□□□ 0.3
PCDHA3-201ENST00000522353 MAGEA9P43362 315 aa16.92■□□□□ 0.3
PCDHA3-201ENST00000522353 AARS2Q5JTZ9 985 aaKnown RBP16.92■□□□□ 0.3
PCDHA3-201ENST00000522353 EFL1Q7Z2Z2 1120 aaKnown RBP16.92■□□□□ 0.3
PCDHA3-201ENST00000522353 WDR49Q8IV35 697 aa16.92■□□□□ 0.3
PCDHA3-201ENST00000522353 ASCC2Q9H1I8 757 aaPredicted RBP16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms