RNA–Protein interactions for RNA: ENST00000522121.5

TOP1MT-216, Transcript of DNA topoisomerase I mitochondrial, humanhuman

TSL 3

Gene TOP1MT, Length 874 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1MT-216ENST00000522121 RESP18Q5W5W9 173 aa19.82■□□□□ 0.76
TOP1MT-216ENST00000522121 DPH6Q7L8W6 267 aa19.82■□□□□ 0.76
TOP1MT-216ENST00000522121 HS2ST1Q7LGA3 356 aa19.82■□□□□ 0.76
TOP1MT-216ENST00000522121 WDR49Q8IV35 697 aa19.82■□□□□ 0.76
TOP1MT-216ENST00000522121 SPRYD3Q8NCJ5 442 aa19.82■□□□□ 0.76
TOP1MT-216ENST00000522121 OR5B17Q8NGF7 314 aa19.82■□□□□ 0.76
TOP1MT-216ENST00000522121 ATRIPQ8WXE1 791 aa19.82■□□□□ 0.76
TOP1MT-216ENST00000522121 HPDLQ96IR7 371 aa19.82■□□□□ 0.76
TOP1MT-216ENST00000522121 IER2Q9BTL4 223 aa19.82■□□□□ 0.76
TOP1MT-216ENST00000522121 AGPAT3Q9NRZ7 376 aa19.82■□□□□ 0.76
TOP1MT-216ENST00000522121 THG1LQ9NWX6 298 aaKnown RBP19.82■□□□□ 0.76
TOP1MT-216ENST00000522121 PVALEFA0A1B0GWK0 134 aa19.81■□□□□ 0.76
TOP1MT-216ENST00000522121 ACAT1P24752 427 aaKnown RBP19.81■□□□□ 0.76
TOP1MT-216ENST00000522121 CCNE1P24864 410 aa19.81■□□□□ 0.76
TOP1MT-216ENST00000522121 PLCB2Q00722 1185 aa19.81■□□□□ 0.76
TOP1MT-216ENST00000522121 MTAPQ13126 283 aa19.81■□□□□ 0.76
TOP1MT-216ENST00000522121 PPP2R5DQ14738 602 aa19.81■□□□□ 0.76
TOP1MT-216ENST00000522121 SNRNP35Q16560 246 aaKnown RBP19.81■□□□□ 0.76
TOP1MT-216ENST00000522121 SPATA2LQ8IUW3 424 aaPredicted RBP19.81■□□□□ 0.76
TOP1MT-216ENST00000522121 NELFCDQ8IXH7 590 aa19.81■□□□□ 0.76
TOP1MT-216ENST00000522121 CEP57L1Q8IYX8 460 aa19.81■□□□□ 0.76
TOP1MT-216ENST00000522121 CELF5Q8N6W0 485 aaKnown RBP19.81■□□□□ 0.76
TOP1MT-216ENST00000522121 RDH13Q8NBN7 331 aa19.81■□□□□ 0.76
TOP1MT-216ENST00000522121 BPIFB1Q8TDL5 484 aa19.81■□□□□ 0.76
TOP1MT-216ENST00000522121 FNBP1Q96RU3 617 aa19.81■□□□□ 0.76
TOP1MT-216ENST00000522121 BLZF1Q9H2G9 400 aa19.81■□□□□ 0.76
TOP1MT-216ENST00000522121 CHRDQ9H2X0 955 aa19.81■□□□□ 0.76
TOP1MT-216ENST00000522121 LMAN1LQ9HAT1 526 aa19.81■□□□□ 0.76
TOP1MT-216ENST00000522121 UXTQ9UBK9 157 aaPredicted RBP19.81■□□□□ 0.76
TOP1MT-216ENST00000522121 GTF3C4Q9UKN8 822 aa19.81■□□□□ 0.76
TOP1MT-216ENST00000522121 MAGED2Q9UNF1 606 aaPredicted RBP19.81■□□□□ 0.76
TOP1MT-216ENST00000522121 PCDHGA2Q9Y5H1 932 aa19.81■□□□□ 0.76
TOP1MT-216ENST00000522121 TCHHQ07283 1943 aa19.8■□□□□ 0.76
TOP1MT-216ENST00000522121 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.8■□□□□ 0.76
TOP1MT-216ENST00000522121 GABRDO14764 452 aa19.8■□□□□ 0.76
TOP1MT-216ENST00000522121 TGFB1I1O43294 461 aa19.8■□□□□ 0.76
TOP1MT-216ENST00000522121 HMGA1P17096 107 aaKnown RBP19.8■□□□□ 0.76
TOP1MT-216ENST00000522121 TNNI1P19237 187 aa19.8■□□□□ 0.76
TOP1MT-216ENST00000522121 DDX6P26196 483 aaKnown RBP eCLIP19.8■□□□□ 0.76
TOP1MT-216ENST00000522121 AVPR1AP37288 418 aa19.8■□□□□ 0.76
TOP1MT-216ENST00000522121 AFMP43652 599 aa19.8■□□□□ 0.76
TOP1MT-216ENST00000522121 CYP2J2P51589 502 aa19.8■□□□□ 0.76
TOP1MT-216ENST00000522121 NLRP12P59046 1061 aa19.8■□□□□ 0.76
TOP1MT-216ENST00000522121 SOWAHAQ2M3V2 549 aa19.8■□□□□ 0.76
TOP1MT-216ENST00000522121 SCARA3Q6AZY7 606 aa19.8■□□□□ 0.76
TOP1MT-216ENST00000522121 CMTM8Q8IZV2 173 aa19.8■□□□□ 0.76
TOP1MT-216ENST00000522121 ZNF687Q8N1G0 1237 aa19.8■□□□□ 0.76
TOP1MT-216ENST00000522121 XXYLT1Q8NBI6 393 aa19.8■□□□□ 0.76
TOP1MT-216ENST00000522121 SCFD1Q8WVM8 642 aa19.8■□□□□ 0.76
TOP1MT-216ENST00000522121 MRPS31Q92665 395 aaKnown RBP19.8■□□□□ 0.76
TOP1MT-216ENST00000522121 HINFPQ9BQA5 517 aa19.8■□□□□ 0.76
TOP1MT-216ENST00000522121 SLC46A2Q9BY10 475 aa19.8■□□□□ 0.76
TOP1MT-216ENST00000522121 ZSCAN32Q9NX65 697 aa19.8■□□□□ 0.76
TOP1MT-216ENST00000522121 CGNQ9P2M7 1197 aaKnown RBP19.8■□□□□ 0.76
TOP1MT-216ENST00000522121 MYO15AQ9UKN7 3530 aa19.8■□□□□ 0.76
TOP1MT-216ENST00000522121 PTPRJQ12913 1337 aa19.79■□□□□ 0.76
TOP1MT-216ENST00000522121 VPS13AQ96RL7 3174 aa19.79■□□□□ 0.76
TOP1MT-216ENST00000522121 SLC38A8A6NNN8 435 aa19.79■□□□□ 0.76
TOP1MT-216ENST00000522121 SOBPA7XYQ1 873 aa19.79■□□□□ 0.76
TOP1MT-216ENST00000522121 CLIC2O15247 247 aa19.79■□□□□ 0.76
TOP1MT-216ENST00000522121 PRAMEF12O95522 483 aa19.79■□□□□ 0.76
TOP1MT-216ENST00000522121 F11P03951 625 aa19.79■□□□□ 0.76
TOP1MT-216ENST00000522121 DLATP10515 647 aaKnown RBP19.79■□□□□ 0.76
TOP1MT-216ENST00000522121 CYP2F1P24903 491 aa19.79■□□□□ 0.76
TOP1MT-216ENST00000522121 CASP1P29466 404 aa19.79■□□□□ 0.76
TOP1MT-216ENST00000522121 GPR15P49685 360 aa19.79■□□□□ 0.76
TOP1MT-216ENST00000522121 DNM1Q05193 864 aaKnown RBP19.79■□□□□ 0.76
TOP1MT-216ENST00000522121 EHHADHQ08426 723 aa19.79■□□□□ 0.76
TOP1MT-216ENST00000522121 PKP1Q13835 747 aa19.79■□□□□ 0.76
TOP1MT-216ENST00000522121 LRRC32Q14392 662 aa19.79■□□□□ 0.76
TOP1MT-216ENST00000522121 DDR2Q16832 855 aa19.79■□□□□ 0.76
TOP1MT-216ENST00000522121 CFAP221Q4G0U5 840 aa19.79■□□□□ 0.76
TOP1MT-216ENST00000522121 MAMSTRQ6ZN01 415 aa19.79■□□□□ 0.76
TOP1MT-216ENST00000522121 C4orf50Q6ZRC1 276 aa19.79■□□□□ 0.76
TOP1MT-216ENST00000522121 TRAPPC11Q7Z392 1133 aa19.79■□□□□ 0.76
TOP1MT-216ENST00000522121 OSTM1Q86WC4 334 aa19.79■□□□□ 0.76
TOP1MT-216ENST00000522121 RALGPS2Q86X27 583 aaPredicted RBP19.79■□□□□ 0.76
TOP1MT-216ENST00000522121 MAB21L3Q8N8X9 362 aa19.79■□□□□ 0.76
TOP1MT-216ENST00000522121 FUBP3Q96I24 572 aaKnown RBP eCLIP19.79■□□□□ 0.76
TOP1MT-216ENST00000522121 LRRC3BQ96PB8 259 aa19.79■□□□□ 0.76
TOP1MT-216ENST00000522121 MMS19Q96T76 1030 aa19.79■□□□□ 0.76
TOP1MT-216ENST00000522121 FAM126AQ9BYI3 521 aaPredicted RBP19.79■□□□□ 0.76
TOP1MT-216ENST00000522121 SLC39A2Q9NP94 309 aa19.79■□□□□ 0.76
TOP1MT-216ENST00000522121 PRMT8Q9NR22 394 aaPredicted RBP19.79■□□□□ 0.76
TOP1MT-216ENST00000522121 RCOR1Q9UKL0 485 aa19.79■□□□□ 0.76
TOP1MT-216ENST00000522121 CUL4BQ13620 913 aa19.78■□□□□ 0.76
TOP1MT-216ENST00000522121 PSMD6Q15008 389 aa19.78■□□□□ 0.76
TOP1MT-216ENST00000522121 MAPRE1Q15691 268 aaKnown RBP19.78■□□□□ 0.76
TOP1MT-216ENST00000522121 SDHAF4Q5VUM1 108 aa19.78■□□□□ 0.76
TOP1MT-216ENST00000522121 TMEM150AQ86TG1 271 aa19.78■□□□□ 0.76
TOP1MT-216ENST00000522121 ZFYVE19Q96K21 471 aa19.78■□□□□ 0.76
TOP1MT-216ENST00000522121 PKMYT1Q99640 499 aa19.78■□□□□ 0.76
TOP1MT-216ENST00000522121 CGRRF1Q99675 332 aa19.78■□□□□ 0.76
TOP1MT-216ENST00000522121 SMG9Q9H0W8 520 aaKnown RBP19.78■□□□□ 0.76
TOP1MT-216ENST00000522121 CDH9Q9ULB4 789 aa19.78■□□□□ 0.76
TOP1MT-216ENST00000522121 MYBPHLA2RUH7 354 aa19.77■□□□□ 0.76
TOP1MT-216ENST00000522121 SPECC1L-ADORA2AF8WAN1 911 aa19.77■□□□□ 0.76
TOP1MT-216ENST00000522121 SLFN14P0C7P3 912 aa19.77■□□□□ 0.76
TOP1MT-216ENST00000522121 CHRNB1P11230 501 aa19.77■□□□□ 0.76
TOP1MT-216ENST00000522121 SOX9P48436 509 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms