RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 MICAL2O94851 1124 aa22.69■■□□□ 1.22
R3HCC1-208ENST00000522012 FTLP02792 175 aaPredicted RBP22.69■■□□□ 1.22
R3HCC1-208ENST00000522012 CYP1A1P04798 512 aaPredicted RBP22.69■■□□□ 1.22
R3HCC1-208ENST00000522012 GZMAP12544 262 aa22.69■■□□□ 1.22
R3HCC1-208ENST00000522012 PPP1R26Q5T8A7 1209 aaPredicted RBP22.69■■□□□ 1.22
R3HCC1-208ENST00000522012 KIAA0319Q5VV43 1072 aa22.69■■□□□ 1.22
R3HCC1-208ENST00000522012 ACAD10Q6JQN1 1059 aa22.69■■□□□ 1.22
R3HCC1-208ENST00000522012 TXLNBQ8N3L3 684 aa22.69■■□□□ 1.22
R3HCC1-208ENST00000522012 COLGALT1Q8NBJ5 622 aa22.69■■□□□ 1.22
R3HCC1-208ENST00000522012 IGSF21Q96ID5 467 aa22.69■■□□□ 1.22
R3HCC1-208ENST00000522012 RAD9AQ99638 391 aa22.69■■□□□ 1.22
R3HCC1-208ENST00000522012 RTP3Q9BQQ7 232 aa22.69■■□□□ 1.22
R3HCC1-208ENST00000522012 LZTFL1Q9NQ48 299 aa22.69■■□□□ 1.22
R3HCC1-208ENST00000522012 CDH9Q9ULB4 789 aa22.69■■□□□ 1.22
R3HCC1-208ENST00000522012 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.69■■□□□ 1.22
R3HCC1-208ENST00000522012 CEP83Q9Y592 693 aa22.69■■□□□ 1.22
R3HCC1-208ENST00000522012 COL4A6Q14031 1691 aa22.69■■□□□ 1.22
R3HCC1-208ENST00000522012 TLL1O43897 1013 aa22.68■■□□□ 1.22
R3HCC1-208ENST00000522012 H2AFZP0C0S5 128 aa22.68■■□□□ 1.22
R3HCC1-208ENST00000522012 UNGP13051 313 aaPredicted RBP22.68■■□□□ 1.22
R3HCC1-208ENST00000522012 CCDC130P13994 396 aa22.68■■□□□ 1.22
R3HCC1-208ENST00000522012 STILQ15468 1287 aa22.68■■□□□ 1.22
R3HCC1-208ENST00000522012 GOLGA7BQ2TAP0 167 aa22.68■■□□□ 1.22
R3HCC1-208ENST00000522012 C9orf50Q5SZB4 431 aa22.68■■□□□ 1.22
R3HCC1-208ENST00000522012 LCLAT1Q6UWP7 414 aa22.68■■□□□ 1.22
R3HCC1-208ENST00000522012 H2AFVQ71UI9 128 aa22.68■■□□□ 1.22
R3HCC1-208ENST00000522012 TMEM35BQ8NCS4 154 aa22.68■■□□□ 1.22
R3HCC1-208ENST00000522012 B3GALT6Q96L58 329 aa22.68■■□□□ 1.22
R3HCC1-208ENST00000522012 ACBD6Q9BR61 282 aa22.68■■□□□ 1.22
R3HCC1-208ENST00000522012 ISCUQ9H1K1 167 aa22.68■■□□□ 1.22
R3HCC1-208ENST00000522012 TSPAN16Q9UKR8 245 aa22.68■■□□□ 1.22
R3HCC1-208ENST00000522012 M0QYV0 167 aa22.67■■□□□ 1.22
R3HCC1-208ENST00000522012 LSM8O95777 96 aaKnown RBP22.67■■□□□ 1.22
R3HCC1-208ENST00000522012 FGFR3P22607 806 aa22.67■■□□□ 1.22
R3HCC1-208ENST00000522012 GALCP54803 685 aa22.67■■□□□ 1.22
R3HCC1-208ENST00000522012 NOMO3P69849 1222 aa22.67■■□□□ 1.22
R3HCC1-208ENST00000522012 KIF5AQ12840 1032 aa22.67■■□□□ 1.22
R3HCC1-208ENST00000522012 ARHGAP29Q52LW3 1261 aa22.67■■□□□ 1.22
R3HCC1-208ENST00000522012 MDH1BQ5I0G3 518 aa22.67■■□□□ 1.22
R3HCC1-208ENST00000522012 RASIP1Q5U651 963 aa22.67■■□□□ 1.22
R3HCC1-208ENST00000522012 ARHGAP17Q68EM7 881 aa22.67■■□□□ 1.22
R3HCC1-208ENST00000522012 UBA3Q8TBC4 463 aa22.67■■□□□ 1.22
R3HCC1-208ENST00000522012 LACRTQ9GZZ8 138 aa22.67■■□□□ 1.22
R3HCC1-208ENST00000522012 AAASQ9NRG9 546 aa22.67■■□□□ 1.22
R3HCC1-208ENST00000522012 SPG21Q9NZD8 308 aa22.67■■□□□ 1.22
R3HCC1-208ENST00000522012 CARNS1A5YM72 827 aa22.67■■□□□ 1.22
R3HCC1-208ENST00000522012 GOLGA6L9A6NEM1 432 aa22.67■■□□□ 1.22
R3HCC1-208ENST00000522012 OAZ2O95190 189 aa22.67■■□□□ 1.22
R3HCC1-208ENST00000522012 ABCB4P21439 1286 aa22.67■■□□□ 1.22
R3HCC1-208ENST00000522012 ADORA2BP29275 332 aa22.67■■□□□ 1.22
R3HCC1-208ENST00000522012 NSFP46459 744 aaKnown RBP22.67■■□□□ 1.22
R3HCC1-208ENST00000522012 CCDC142Q17RM4 750 aa22.67■■□□□ 1.22
R3HCC1-208ENST00000522012 VARS2Q5ST30 1063 aaKnown RBP22.67■■□□□ 1.22
R3HCC1-208ENST00000522012 PDZRN4Q6ZMN7 1036 aaPredicted RBP22.67■■□□□ 1.22
R3HCC1-208ENST00000522012 TAS1R1Q7RTX1 841 aa22.67■■□□□ 1.22
R3HCC1-208ENST00000522012 SLC39A11Q8N1S5 342 aa22.67■■□□□ 1.22
R3HCC1-208ENST00000522012 C1orf131Q8NDD1 294 aaKnown RBP22.67■■□□□ 1.22
R3HCC1-208ENST00000522012 SLC2A14Q8TDB8 520 aa22.67■■□□□ 1.22
R3HCC1-208ENST00000522012 RNPC3Q96LT9 517 aaKnown RBP22.67■■□□□ 1.22
R3HCC1-208ENST00000522012 LHX5Q9H2C1 402 aa22.67■■□□□ 1.22
R3HCC1-208ENST00000522012 CRTAC1Q9NQ79 661 aa22.67■■□□□ 1.22
R3HCC1-208ENST00000522012 HESX1Q9UBX0 185 aa22.67■■□□□ 1.22
R3HCC1-208ENST00000522012 TRIM10Q9UDY6 481 aa22.67■■□□□ 1.22
R3HCC1-208ENST00000522012 MYBPHLA2RUH7 354 aa22.66■■□□□ 1.22
R3HCC1-208ENST00000522012 ARHGAP25P42331 645 aa22.66■■□□□ 1.22
R3HCC1-208ENST00000522012 CDR1P51861 262 aa22.66■■□□□ 1.22
R3HCC1-208ENST00000522012 TSPY1Q01534 308 aa22.66■■□□□ 1.22
R3HCC1-208ENST00000522012 SHHQ15465 462 aa22.66■■□□□ 1.22
R3HCC1-208ENST00000522012 INTS6LQ5JSJ4 861 aaKnown RBP22.66■■□□□ 1.22
R3HCC1-208ENST00000522012 WDTC1Q8N5D0 677 aa22.66■■□□□ 1.22
R3HCC1-208ENST00000522012 OR10T2Q8NGX3 314 aa22.66■■□□□ 1.22
R3HCC1-208ENST00000522012 TMEM169Q96HH4 297 aa22.66■■□□□ 1.22
R3HCC1-208ENST00000522012 MED10Q9BTT4 135 aa22.66■■□□□ 1.22
R3HCC1-208ENST00000522012 TTPALQ9BTX7 342 aa22.66■■□□□ 1.22
R3HCC1-208ENST00000522012 TSGA10Q9BZW7 698 aa22.66■■□□□ 1.22
R3HCC1-208ENST00000522012 ZNF518BQ9C0D4 1074 aa22.66■■□□□ 1.22
R3HCC1-208ENST00000522012 GTF3C4Q9UKN8 822 aa22.66■■□□□ 1.22
R3HCC1-208ENST00000522012 INTUQ9ULD6 942 aa22.66■■□□□ 1.22
R3HCC1-208ENST00000522012 PCDHB12Q9Y5F1 795 aa22.66■■□□□ 1.22
R3HCC1-208ENST00000522012 FNDC1Q4ZHG4 1894 aaPredicted RBP22.66■■□□□ 1.22
R3HCC1-208ENST00000522012 KRT86O43790 486 aa22.65■■□□□ 1.22
R3HCC1-208ENST00000522012 ABL1P00519 1130 aa22.65■■□□□ 1.22
R3HCC1-208ENST00000522012 CENPCQ03188 943 aa22.65■■□□□ 1.22
R3HCC1-208ENST00000522012 CTXN3Q4LDR2 81 aa22.65■■□□□ 1.22
R3HCC1-208ENST00000522012 MYCBPAPQ8TBZ2 947 aa22.65■■□□□ 1.22
R3HCC1-208ENST00000522012 CTNNBL1Q8WYA6 563 aaPredicted RBP22.65■■□□□ 1.22
R3HCC1-208ENST00000522012 TMEM209Q96SK2 561 aa22.65■■□□□ 1.22
R3HCC1-208ENST00000522012 HNRNPABQ99729 332 aaKnown RBP22.65■■□□□ 1.22
R3HCC1-208ENST00000522012 GUCA1BQ9UMX6 200 aa22.65■■□□□ 1.22
R3HCC1-208ENST00000522012 DUSP10Q9Y6W6 482 aa22.65■■□□□ 1.22
R3HCC1-208ENST00000522012 ANKRD62A6NC57 917 aa22.64■■□□□ 1.21
R3HCC1-208ENST00000522012 CLDN5O00501 218 aa22.64■■□□□ 1.21
R3HCC1-208ENST00000522012 PJA2O43164 708 aa22.64■■□□□ 1.21
R3HCC1-208ENST00000522012 CDH5P33151 784 aaPredicted RBP22.64■■□□□ 1.21
R3HCC1-208ENST00000522012 RABGGTBP53611 331 aa22.64■■□□□ 1.21
R3HCC1-208ENST00000522012 USP41Q3LFD5 358 aa22.64■■□□□ 1.21
R3HCC1-208ENST00000522012 RTP2Q5QGT7 225 aa22.64■■□□□ 1.21
R3HCC1-208ENST00000522012 PPP1R2P3Q6NXS1 205 aa22.64■■□□□ 1.21
R3HCC1-208ENST00000522012 ZNF662Q6ZS27 426 aa22.64■■□□□ 1.21
R3HCC1-208ENST00000522012 SECISBP2LQ93073 1101 aaKnown RBP22.64■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms