RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 CCDC50Q8IVM0 306 aa19.53■□□□□ 0.72
TRAPPC9-210ENST00000521667 NIPA2Q8N8Q9 360 aa19.53■□□□□ 0.72
TRAPPC9-210ENST00000521667 EXD1Q8NHP7 514 aa19.53■□□□□ 0.72
TRAPPC9-210ENST00000521667 RNF39Q9H2S5 420 aa19.53■□□□□ 0.72
TRAPPC9-210ENST00000521667 SYNCQ9H7C4 482 aa19.53■□□□□ 0.72
TRAPPC9-210ENST00000521667 RNF186Q9NXI6 227 aa19.53■□□□□ 0.72
TRAPPC9-210ENST00000521667 KLK14Q9P0G3 267 aa19.53■□□□□ 0.72
TRAPPC9-210ENST00000521667 TJP2Q9UDY2 1190 aa19.53■□□□□ 0.72
TRAPPC9-210ENST00000521667 IPPQ9Y573 584 aa19.53■□□□□ 0.72
TRAPPC9-210ENST00000521667 SIGLEC16A6NMB1 481 aa19.52■□□□□ 0.72
TRAPPC9-210ENST00000521667 GOLGA8SH3BPF8 625 aa19.52■□□□□ 0.72
TRAPPC9-210ENST00000521667 XPOTO43592 962 aaKnown RBP19.52■□□□□ 0.72
TRAPPC9-210ENST00000521667 HSF2BPO75031 334 aa19.52■□□□□ 0.72
TRAPPC9-210ENST00000521667 CD4P01730 458 aa19.52■□□□□ 0.72
TRAPPC9-210ENST00000521667 KRT3P12035 628 aa19.52■□□□□ 0.72
TRAPPC9-210ENST00000521667 KCNE1P15382 129 aa19.52■□□□□ 0.72
TRAPPC9-210ENST00000521667 HSPA9P38646 679 aaKnown RBP19.52■□□□□ 0.72
TRAPPC9-210ENST00000521667 SP3Q02447 781 aa19.52■□□□□ 0.72
TRAPPC9-210ENST00000521667 LLGL1Q15334 1064 aa19.52■□□□□ 0.72
TRAPPC9-210ENST00000521667 LRRC38Q5VT99 294 aa19.52■□□□□ 0.72
TRAPPC9-210ENST00000521667 LCLAT1Q6UWP7 414 aa19.52■□□□□ 0.72
TRAPPC9-210ENST00000521667 DPH6Q7L8W6 267 aa19.52■□□□□ 0.72
TRAPPC9-210ENST00000521667 CCDC105Q8IYK2 499 aa19.52■□□□□ 0.72
TRAPPC9-210ENST00000521667 MRPL45Q9BRJ2 306 aaKnown RBP19.52■□□□□ 0.72
TRAPPC9-210ENST00000521667 TRIM31Q9BZY9 425 aa19.52■□□□□ 0.72
TRAPPC9-210ENST00000521667 F8VP50 259 aa19.52■□□□□ 0.72
TRAPPC9-210ENST00000521667 PODXLO00592 558 aa19.52■□□□□ 0.72
TRAPPC9-210ENST00000521667 ERBB2P04626 1255 aa19.52■□□□□ 0.72
TRAPPC9-210ENST00000521667 GJC1P36383 396 aa19.52■□□□□ 0.72
TRAPPC9-210ENST00000521667 DRG2P55039 364 aaKnown RBP19.52■□□□□ 0.72
TRAPPC9-210ENST00000521667 CACNB2Q08289 660 aaPredicted RBP19.52■□□□□ 0.72
TRAPPC9-210ENST00000521667 PDCLQ13371 301 aa19.52■□□□□ 0.72
TRAPPC9-210ENST00000521667 ZNF268Q14587 947 aaPredicted RBP19.52■□□□□ 0.72
TRAPPC9-210ENST00000521667 STILQ15468 1287 aa19.52■□□□□ 0.72
TRAPPC9-210ENST00000521667 TERF2Q15554 542 aa19.52■□□□□ 0.72
TRAPPC9-210ENST00000521667 GDF6Q6KF10 455 aaPredicted RBP19.52■□□□□ 0.72
TRAPPC9-210ENST00000521667 RSPH3Q86UC2 560 aa19.52■□□□□ 0.72
TRAPPC9-210ENST00000521667 XYLT1Q86Y38 959 aa19.52■□□□□ 0.72
TRAPPC9-210ENST00000521667 RNF19AQ9NV58 838 aa19.52■□□□□ 0.72
TRAPPC9-210ENST00000521667 TRPV2Q9Y5S1 764 aa19.52■□□□□ 0.72
TRAPPC9-210ENST00000521667 CDY2AQ9Y6F7 541 aa19.52■□□□□ 0.72
TRAPPC9-210ENST00000521667 PIRO00625 290 aa19.51■□□□□ 0.71
TRAPPC9-210ENST00000521667 GABRB2P47870 512 aa19.51■□□□□ 0.71
TRAPPC9-210ENST00000521667 TWF2Q6IBS0 349 aaKnown RBP19.51■□□□□ 0.71
TRAPPC9-210ENST00000521667 SMG8Q8ND04 991 aaKnown RBP19.51■□□□□ 0.71
TRAPPC9-210ENST00000521667 HERPUD2Q9BSE4 406 aa19.51■□□□□ 0.71
TRAPPC9-210ENST00000521667 VPS18Q9P253 973 aa19.51■□□□□ 0.71
TRAPPC9-210ENST00000521667 TSPAN16Q9UKR8 245 aa19.51■□□□□ 0.71
TRAPPC9-210ENST00000521667 FAN1Q9Y2M0 1017 aa19.51■□□□□ 0.71
TRAPPC9-210ENST00000521667 ADAMTS4O75173 837 aa19.51■□□□□ 0.71
TRAPPC9-210ENST00000521667 RALAP11233 206 aa19.51■□□□□ 0.71
TRAPPC9-210ENST00000521667 CYP3A5P20815 502 aa19.51■□□□□ 0.71
TRAPPC9-210ENST00000521667 RFC1P35251 1148 aaPredicted RBP19.51■□□□□ 0.71
TRAPPC9-210ENST00000521667 CFAP58Q5T655 872 aa19.51■□□□□ 0.71
TRAPPC9-210ENST00000521667 REM2Q8IYK8 340 aaPredicted RBP19.51■□□□□ 0.71
TRAPPC9-210ENST00000521667 UBA3Q8TBC4 463 aa19.51■□□□□ 0.71
TRAPPC9-210ENST00000521667 FNIP1Q8TF40 1166 aa19.51■□□□□ 0.71
TRAPPC9-210ENST00000521667 C1orf54Q8WWF1 131 aa19.51■□□□□ 0.71
TRAPPC9-210ENST00000521667 RIN2Q8WYP3 895 aaPredicted RBP19.51■□□□□ 0.71
TRAPPC9-210ENST00000521667 LRRC45Q96CN5 670 aa19.51■□□□□ 0.71
TRAPPC9-210ENST00000521667 XPNPEP3Q9NQH7 507 aa19.51■□□□□ 0.71
TRAPPC9-210ENST00000521667 RNF40O75150 1001 aa19.5■□□□□ 0.71
TRAPPC9-210ENST00000521667 TCF4P15884 667 aa19.5■□□□□ 0.71
TRAPPC9-210ENST00000521667 CETN2P41208 172 aa19.5■□□□□ 0.71
TRAPPC9-210ENST00000521667 KLF1Q13351 362 aaPredicted RBP19.5■□□□□ 0.71
TRAPPC9-210ENST00000521667 FAM47CQ5HY64 1035 aa19.5■□□□□ 0.71
TRAPPC9-210ENST00000521667 FBXO47Q5MNV8 452 aa19.5■□□□□ 0.71
TRAPPC9-210ENST00000521667 UNC93AQ86WB7 457 aa19.5■□□□□ 0.71
TRAPPC9-210ENST00000521667 RCOR2Q8IZ40 523 aa19.5■□□□□ 0.71
TRAPPC9-210ENST00000521667 IQCKQ8N0W5 287 aa19.5■□□□□ 0.71
TRAPPC9-210ENST00000521667 JOSD2Q8TAC2 188 aa19.5■□□□□ 0.71
TRAPPC9-210ENST00000521667 CD99L2Q8TCZ2 262 aa19.5■□□□□ 0.71
TRAPPC9-210ENST00000521667 RBM41Q96IZ5 413 aaKnown RBP19.5■□□□□ 0.71
TRAPPC9-210ENST00000521667 ZNF560Q96MR9 790 aa19.5■□□□□ 0.71
TRAPPC9-210ENST00000521667 RUFY1Q96T51 708 aa19.5■□□□□ 0.71
TRAPPC9-210ENST00000521667 OSBPL8Q9BZF1 889 aa19.5■□□□□ 0.71
TRAPPC9-210ENST00000521667 PRDM10Q9NQV6 1147 aa19.5■□□□□ 0.71
TRAPPC9-210ENST00000521667 ECEL1O95672 775 aa19.49■□□□□ 0.71
TRAPPC9-210ENST00000521667 PSMA2P25787 234 aa19.49■□□□□ 0.71
TRAPPC9-210ENST00000521667 PNPLA4P41247 253 aa19.49■□□□□ 0.71
TRAPPC9-210ENST00000521667 KCNJ1P48048 391 aa19.49■□□□□ 0.71
TRAPPC9-210ENST00000521667 SERINC5Q86VE9 423 aa19.49■□□□□ 0.71
TRAPPC9-210ENST00000521667 C12orf29Q8N999 325 aa19.49■□□□□ 0.71
TRAPPC9-210ENST00000521667 IPO4Q8TEX9 1081 aaKnown RBP19.49■□□□□ 0.71
TRAPPC9-210ENST00000521667 SLCO2A1Q92959 643 aa19.49■□□□□ 0.71
TRAPPC9-210ENST00000521667 MCRS1Q96EZ8 462 aa19.49■□□□□ 0.71
TRAPPC9-210ENST00000521667 ZIM3Q96PE6 472 aa19.49■□□□□ 0.71
TRAPPC9-210ENST00000521667 SH3GL2Q99962 352 aa19.49■□□□□ 0.71
TRAPPC9-210ENST00000521667 HEMGNQ9BXL5 484 aa19.49■□□□□ 0.71
TRAPPC9-210ENST00000521667 METTL5Q9NRN9 209 aaKnown RBP19.49■□□□□ 0.71
TRAPPC9-210ENST00000521667 SNX24Q9Y343 169 aa19.49■□□□□ 0.71
TRAPPC9-210ENST00000521667 TRIP12Q14669 1992 aaPredicted RBP19.49■□□□□ 0.71
TRAPPC9-210ENST00000521667 OPA1O60313 960 aa19.49■□□□□ 0.71
TRAPPC9-210ENST00000521667 ELNP15502 786 aa19.49■□□□□ 0.71
TRAPPC9-210ENST00000521667 GBP1P32455 592 aa19.49■□□□□ 0.71
TRAPPC9-210ENST00000521667 NFX1Q12986 1120 aaKnown RBP19.49■□□□□ 0.71
TRAPPC9-210ENST00000521667 SOWAHAQ2M3V2 549 aa19.49■□□□□ 0.71
TRAPPC9-210ENST00000521667 GOLGA7BQ2TAP0 167 aa19.49■□□□□ 0.71
TRAPPC9-210ENST00000521667 ATP13A4Q4VNC1 1196 aa19.49■□□□□ 0.71
TRAPPC9-210ENST00000521667 ACOT1Q86TX2 421 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms