RNA–Protein interactions for RNA: ENST00000521646.1

CSMD1-210, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 5

Gene CSMD1, Length 1,003 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-210ENST00000521646 ZNF395Q9H8N7 513 aaPredicted RBP12.05□□□□□ -0.48
CSMD1-210ENST00000521646 SLC38A7Q9NVC3 462 aa12.05□□□□□ -0.48
CSMD1-210ENST00000521646 DNMT3LQ9UJW3 386 aa12.05□□□□□ -0.48
CSMD1-210ENST00000521646 USP18Q9UMW8 372 aa12.05□□□□□ -0.48
CSMD1-210ENST00000521646 NUB1Q9Y5A7 615 aa12.05□□□□□ -0.48
CSMD1-210ENST00000521646 ATG2BQ96BY7 2078 aa12.05□□□□□ -0.48
CSMD1-210ENST00000521646 DENND4CQ5VZ89 1909 aa12.04□□□□□ -0.48
CSMD1-210ENST00000521646 H3BM21 787 aa12.04□□□□□ -0.48
CSMD1-210ENST00000521646 H7C4K7 107 aa12.04□□□□□ -0.48
CSMD1-210ENST00000521646 SPINT1O43278 529 aa12.04□□□□□ -0.48
CSMD1-210ENST00000521646 ADRB2P07550 413 aa12.04□□□□□ -0.48
CSMD1-210ENST00000521646 NFICP08651 508 aa12.04□□□□□ -0.48
CSMD1-210ENST00000521646 PLS3P13797 630 aa12.04□□□□□ -0.48
CSMD1-210ENST00000521646 CPB1P15086 417 aa12.04□□□□□ -0.48
CSMD1-210ENST00000521646 TRAPPC10P48553 1259 aa12.04□□□□□ -0.48
CSMD1-210ENST00000521646 MCCD1P59942 119 aaPredicted RBP12.04□□□□□ -0.48
CSMD1-210ENST00000521646 CYP4F8P98187 520 aa12.04□□□□□ -0.48
CSMD1-210ENST00000521646 SAFBQ15424 915 aaKnown RBP eCLIP12.04□□□□□ -0.48
CSMD1-210ENST00000521646 CCDC6Q16204 474 aa12.04□□□□□ -0.48
CSMD1-210ENST00000521646 CCDC142Q17RM4 750 aa12.04□□□□□ -0.48
CSMD1-210ENST00000521646 TMEM119Q4V9L6 283 aa12.04□□□□□ -0.48
CSMD1-210ENST00000521646 HEATR6Q6AI08 1181 aaKnown RBP12.04□□□□□ -0.48
CSMD1-210ENST00000521646 LRRTM3Q86VH5 581 aa12.04□□□□□ -0.48
CSMD1-210ENST00000521646 ARID3BQ8IVW6 561 aaPredicted RBP12.04□□□□□ -0.48
CSMD1-210ENST00000521646 ZSWIM2Q8NEG5 633 aa12.04□□□□□ -0.48
CSMD1-210ENST00000521646 LLPHQ9BRT6 129 aaKnown RBP12.04□□□□□ -0.48
CSMD1-210ENST00000521646 TCHPQ9BT92 498 aa12.04□□□□□ -0.48
CSMD1-210ENST00000521646 ASAH2Q9NR71 780 aa12.04□□□□□ -0.48
CSMD1-210ENST00000521646 DNM3Q9UQ16 869 aa12.04□□□□□ -0.48
CSMD1-210ENST00000521646 AKAP13Q12802 2813 aa12.03□□□□□ -0.48
CSMD1-210ENST00000521646 MYBPHLA2RUH7 354 aa12.03□□□□□ -0.48
CSMD1-210ENST00000521646 SPECC1L-ADORA2AF8WAN1 911 aa12.03□□□□□ -0.48
CSMD1-210ENST00000521646 ZNF197O14709 1029 aa12.03□□□□□ -0.48
CSMD1-210ENST00000521646 EXTL3O43909 919 aa12.03□□□□□ -0.48
CSMD1-210ENST00000521646 PXNP49023 591 aaPredicted RBP12.03□□□□□ -0.48
CSMD1-210ENST00000521646 NCKAP1LP55160 1127 aa12.03□□□□□ -0.48
CSMD1-210ENST00000521646 ATP2C1P98194 919 aaPredicted RBP12.03□□□□□ -0.48
CSMD1-210ENST00000521646 YWHAHQ04917 246 aaPredicted RBP12.03□□□□□ -0.48
CSMD1-210ENST00000521646 GPR17Q13304 367 aa12.03□□□□□ -0.48
CSMD1-210ENST00000521646 CCINQ13939 588 aa12.03□□□□□ -0.48
CSMD1-210ENST00000521646 PON2Q15165 354 aa12.03□□□□□ -0.48
CSMD1-210ENST00000521646 ZRSR1Q15695 479 aaKnown RBP12.03□□□□□ -0.48
CSMD1-210ENST00000521646 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.03□□□□□ -0.48
CSMD1-210ENST00000521646 LCE2CQ5TA81 110 aa12.03□□□□□ -0.48
CSMD1-210ENST00000521646 CYP4A22Q5TCH4 519 aa12.03□□□□□ -0.48
CSMD1-210ENST00000521646 SYT2Q8N9I0 419 aaPredicted RBP12.03□□□□□ -0.48
CSMD1-210ENST00000521646 EZH1Q92800 747 aaPredicted RBP12.03□□□□□ -0.48
CSMD1-210ENST00000521646 DRC1Q96MC2 740 aa12.03□□□□□ -0.48
CSMD1-210ENST00000521646 ZNF512Q96ME7 567 aaPredicted RBP12.03□□□□□ -0.48
CSMD1-210ENST00000521646 SMOC1Q9H4F8 434 aa12.03□□□□□ -0.48
CSMD1-210ENST00000521646 FBRSL1Q9HCM7 1045 aaKnown RBP12.03□□□□□ -0.48
CSMD1-210ENST00000521646 CYLDQ9NQC7 956 aa12.03□□□□□ -0.48
CSMD1-210ENST00000521646 SEMA4GQ9NTN9 838 aa12.03□□□□□ -0.48
CSMD1-210ENST00000521646 BLOC1S4Q9NUP1 217 aa12.03□□□□□ -0.48
CSMD1-210ENST00000521646 CCL26Q9Y258 94 aa12.03□□□□□ -0.48
CSMD1-210ENST00000521646 RALGAPA1Q6GYQ0 2036 aa12.03□□□□□ -0.48
CSMD1-210ENST00000521646 MYO16Q9Y6X6 1858 aa12.02□□□□□ -0.48
CSMD1-210ENST00000521646 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.02□□□□□ -0.49
CSMD1-210ENST00000521646 ANKRD63C9JTQ0 380 aa12.02□□□□□ -0.49
CSMD1-210ENST00000521646 MAN2B1O00754 1011 aa12.02□□□□□ -0.49
CSMD1-210ENST00000521646 ZNF263O14978 683 aa12.02□□□□□ -0.49
CSMD1-210ENST00000521646 WIPF1O43516 503 aa12.02□□□□□ -0.49
CSMD1-210ENST00000521646 LILRA1O75019 489 aa12.02□□□□□ -0.49
CSMD1-210ENST00000521646 ADRB1P08588 477 aa12.02□□□□□ -0.49
CSMD1-210ENST00000521646 NMT1P30419 496 aaKnown RBP12.02□□□□□ -0.49
CSMD1-210ENST00000521646 PRPHP41219 470 aa12.02□□□□□ -0.49
CSMD1-210ENST00000521646 CXCL12P48061 93 aa12.02□□□□□ -0.49
CSMD1-210ENST00000521646 GPR15P49685 360 aa12.02□□□□□ -0.49
CSMD1-210ENST00000521646 LILRA4P59901 499 aa12.02□□□□□ -0.49
CSMD1-210ENST00000521646 LMNB2Q03252 620 aa12.02□□□□□ -0.49
CSMD1-210ENST00000521646 JADE1Q6IE81 842 aa12.02□□□□□ -0.49
CSMD1-210ENST00000521646 ZPBP2Q6X784 338 aa12.02□□□□□ -0.49
CSMD1-210ENST00000521646 PRR23BQ6ZRT6 265 aa12.02□□□□□ -0.49
CSMD1-210ENST00000521646 DNAJB7Q7Z6W7 309 aaPredicted RBP12.02□□□□□ -0.49
CSMD1-210ENST00000521646 DEPDC1BQ8WUY9 529 aa12.02□□□□□ -0.49
CSMD1-210ENST00000521646 ZNF592Q92610 1267 aa12.02□□□□□ -0.49
CSMD1-210ENST00000521646 BORCS6Q96GS4 357 aa12.02□□□□□ -0.49
CSMD1-210ENST00000521646 REEP2Q9BRK0 252 aa12.02□□□□□ -0.49
CSMD1-210ENST00000521646 POLMQ9NP87 494 aaPredicted RBP12.02□□□□□ -0.49
CSMD1-210ENST00000521646 HPS4Q9NQG7 708 aa12.02□□□□□ -0.49
CSMD1-210ENST00000521646 TMLHEQ9NVH6 421 aa12.02□□□□□ -0.49
CSMD1-210ENST00000521646 RALYQ9UKM9 306 aaKnown RBP12.02□□□□□ -0.49
CSMD1-210ENST00000521646 MRPS17Q9Y2R5 130 aaKnown RBP12.02□□□□□ -0.49
CSMD1-210ENST00000521646 RBM19Q9Y4C8 960 aaKnown RBP12.02□□□□□ -0.49
CSMD1-210ENST00000521646 KIAA1549LQ6ZVL6 1849 aa12.02□□□□□ -0.49
CSMD1-210ENST00000521646 A0A0B4J269 797 aa12.01□□□□□ -0.49
CSMD1-210ENST00000521646 ANO9A1A5B4 782 aa12.01□□□□□ -0.49
CSMD1-210ENST00000521646 PIRO00625 290 aa12.01□□□□□ -0.49
CSMD1-210ENST00000521646 CHADO15335 359 aa12.01□□□□□ -0.49
CSMD1-210ENST00000521646 NCAM2O15394 837 aa12.01□□□□□ -0.49
CSMD1-210ENST00000521646 CLDN3O15551 220 aa12.01□□□□□ -0.49
CSMD1-210ENST00000521646 HCRTO43612 131 aa12.01□□□□□ -0.49
CSMD1-210ENST00000521646 TADA3O75528 432 aa12.01□□□□□ -0.49
CSMD1-210ENST00000521646 PAPSS2O95340 614 aaPredicted RBP12.01□□□□□ -0.49
CSMD1-210ENST00000521646 PLA2G4BP0C869 781 aa12.01□□□□□ -0.49
CSMD1-210ENST00000521646 CCR3P51677 355 aa12.01□□□□□ -0.49
CSMD1-210ENST00000521646 SF3A2Q15428 464 aaKnown RBP12.01□□□□□ -0.49
CSMD1-210ENST00000521646 SPATA1Q5VX52 437 aa12.01□□□□□ -0.49
CSMD1-210ENST00000521646 C9orf57Q5W0N0 161 aa12.01□□□□□ -0.49
CSMD1-210ENST00000521646 KRT79Q5XKE5 535 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms