RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 RALBP1Q15311 655 aa4.09□□□□□ -1.75
VPS13B-209ENST00000521559 NOMO2Q5JPE7 1267 aa4.09□□□□□ -1.75
VPS13B-209ENST00000521559 CLNKQ7Z7G1 428 aa4.09□□□□□ -1.75
VPS13B-209ENST00000521559 TTC7BQ86TV6 843 aa4.09□□□□□ -1.75
VPS13B-209ENST00000521559 ADGRG3Q86Y34 549 aa4.09□□□□□ -1.75
VPS13B-209ENST00000521559 COA7Q96BR5 231 aa4.09□□□□□ -1.75
VPS13B-209ENST00000521559 HEPHQ9BQS7 1158 aa4.09□□□□□ -1.75
VPS13B-209ENST00000521559 DUSP26Q9BV47 211 aa4.09□□□□□ -1.75
VPS13B-209ENST00000521559 SLC13A1Q9BZW2 595 aa4.09□□□□□ -1.75
VPS13B-209ENST00000521559 SYNPO2LQ9H987 977 aa4.09□□□□□ -1.75
VPS13B-209ENST00000521559 UNKLQ9H9P5 680 aaKnown RBP4.09□□□□□ -1.75
VPS13B-209ENST00000521559 GNL3LQ9NVN8 582 aaKnown RBP4.09□□□□□ -1.75
VPS13B-209ENST00000521559 JKAMPQ9P055 326 aa4.09□□□□□ -1.75
VPS13B-209ENST00000521559 PTGFRNQ9P2B2 879 aa4.09□□□□□ -1.75
VPS13B-209ENST00000521559 USP25Q9UHP3 1055 aa4.09□□□□□ -1.75
VPS13B-209ENST00000521559 MAP3K19Q56UN5 1328 aa4.09□□□□□ -1.75
VPS13B-209ENST00000521559 AATKQ6ZMQ8 1374 aa4.09□□□□□ -1.75
VPS13B-209ENST00000521559 KIAA0232Q92628 1395 aa4.09□□□□□ -1.75
VPS13B-209ENST00000521559 NHSL1Q5SYE7 1610 aa4.09□□□□□ -1.76
VPS13B-209ENST00000521559 TOPAZ1Q8N9V7 1692 aa4.09□□□□□ -1.76
VPS13B-209ENST00000521559 CCDC154A6NI56 674 aa4.08□□□□□ -1.76
VPS13B-209ENST00000521559 GABRDO14764 452 aa4.08□□□□□ -1.76
VPS13B-209ENST00000521559 PPM1GO15355 546 aaPredicted RBP4.08□□□□□ -1.76
VPS13B-209ENST00000521559 ANP32CO43423 234 aa4.08□□□□□ -1.76
VPS13B-209ENST00000521559 HTRA2O43464 458 aaPredicted RBP4.08□□□□□ -1.76
VPS13B-209ENST00000521559 PEX1O43933 1283 aa4.08□□□□□ -1.76
VPS13B-209ENST00000521559 ARIH2O95376 493 aa4.08□□□□□ -1.76
VPS13B-209ENST00000521559 HMGB1P09429 215 aaKnown RBP4.08□□□□□ -1.76
VPS13B-209ENST00000521559 TYRP1P17643 537 aa4.08□□□□□ -1.76
VPS13B-209ENST00000521559 CD38P28907 300 aa4.08□□□□□ -1.76
VPS13B-209ENST00000521559 PPP2R1AP30153 589 aa4.08□□□□□ -1.76
VPS13B-209ENST00000521559 HOXC9P31274 260 aa4.08□□□□□ -1.76
VPS13B-209ENST00000521559 AFF2P51816 1311 aa4.08□□□□□ -1.76
VPS13B-209ENST00000521559 ANAPC15P60006 121 aa4.08□□□□□ -1.76
VPS13B-209ENST00000521559 MRPS35P82673 323 aaKnown RBP4.08□□□□□ -1.76
VPS13B-209ENST00000521559 AMPD3Q01432 767 aa4.08□□□□□ -1.76
VPS13B-209ENST00000521559 PIGFQ07326 219 aa4.08□□□□□ -1.76
VPS13B-209ENST00000521559 SCAPQ12770 1279 aa4.08□□□□□ -1.76
VPS13B-209ENST00000521559 TARDBPQ13148 414 aaKnown RBP eCLIP4.08□□□□□ -1.76
VPS13B-209ENST00000521559 ABCB5Q2M3G0 1257 aa4.08□□□□□ -1.76
VPS13B-209ENST00000521559 HSP90AB2PQ58FF8 381 aa4.08□□□□□ -1.76
VPS13B-209ENST00000521559 KIF24Q5T7B8 1368 aa4.08□□□□□ -1.76
VPS13B-209ENST00000521559 UTP14CQ5TAP6 766 aaKnown RBP4.08□□□□□ -1.76
VPS13B-209ENST00000521559 ZNF772Q68DY9 489 aaPredicted RBP4.08□□□□□ -1.76
VPS13B-209ENST00000521559 SYCE2Q6PIF2 218 aa4.08□□□□□ -1.76
VPS13B-209ENST00000521559 UNC5CLQ8IV45 518 aa4.08□□□□□ -1.76
VPS13B-209ENST00000521559 MIER2Q8N344 545 aa4.08□□□□□ -1.76
VPS13B-209ENST00000521559 LNX2Q8N448 690 aa4.08□□□□□ -1.76
VPS13B-209ENST00000521559 PRPF38AQ8NAV1 312 aaKnown RBP4.08□□□□□ -1.76
VPS13B-209ENST00000521559 IFI44Q8TCB0 444 aa4.08□□□□□ -1.76
VPS13B-209ENST00000521559 CLPTM1LQ96KA5 538 aa4.08□□□□□ -1.76
VPS13B-209ENST00000521559 TEKT5Q96M29 485 aa4.08□□□□□ -1.76
VPS13B-209ENST00000521559 AIFM2Q9BRQ8 373 aa4.08□□□□□ -1.76
VPS13B-209ENST00000521559 KRTAP9-8Q9BYQ0 159 aa4.08□□□□□ -1.76
VPS13B-209ENST00000521559 PRKRIP1Q9H875 184 aaPredicted RBP4.08□□□□□ -1.76
VPS13B-209ENST00000521559 KCTD5Q9NXV2 234 aa4.08□□□□□ -1.76
VPS13B-209ENST00000521559 TLK1Q9UKI8 766 aa4.08□□□□□ -1.76
VPS13B-209ENST00000521559 IPPQ9Y573 584 aa4.08□□□□□ -1.76
VPS13B-209ENST00000521559 PHLPP1O60346 1717 aa4.07□□□□□ -1.76
VPS13B-209ENST00000521559 LRP6O75581 1613 aa4.07□□□□□ -1.76
VPS13B-209ENST00000521559 MED1Q15648 1581 aaPredicted RBP4.07□□□□□ -1.76
VPS13B-209ENST00000521559 SLIT3O75094 1523 aa4.07□□□□□ -1.76
VPS13B-209ENST00000521559 INSRP06213 1382 aa4.07□□□□□ -1.76
VPS13B-209ENST00000521559 PARD3Q8TEW0 1356 aa4.07□□□□□ -1.76
VPS13B-209ENST00000521559 hCG_2014768A0A024R1R8 64 aa4.07□□□□□ -1.76
VPS13B-209ENST00000521559 PRAMEF33A0A0G2JMD5 474 aa4.07□□□□□ -1.76
VPS13B-209ENST00000521559 A0A1W2PS29 197 aa4.07□□□□□ -1.76
VPS13B-209ENST00000521559 CCDC151A5D8V7 595 aa4.07□□□□□ -1.76
VPS13B-209ENST00000521559 PCDHGA12O60330 932 aa4.07□□□□□ -1.76
VPS13B-209ENST00000521559 PRAMEF10O60809 474 aa4.07□□□□□ -1.76
VPS13B-209ENST00000521559 DTNBO60941 627 aa4.07□□□□□ -1.76
VPS13B-209ENST00000521559 SLC43A1O75387 559 aa4.07□□□□□ -1.76
VPS13B-209ENST00000521559 KATNA1O75449 491 aa4.07□□□□□ -1.76
VPS13B-209ENST00000521559 AGFG2O95081 481 aa4.07□□□□□ -1.76
VPS13B-209ENST00000521559 GNAI3P08754 354 aa4.07□□□□□ -1.76
VPS13B-209ENST00000521559 FCER1AP12319 257 aa4.07□□□□□ -1.76
VPS13B-209ENST00000521559 FBLP22087 321 aaKnown RBP4.07□□□□□ -1.76
VPS13B-209ENST00000521559 CDKN1CP49918 316 aaPredicted RBP4.07□□□□□ -1.76
VPS13B-209ENST00000521559 RPS7P62081 194 aaKnown RBP4.07□□□□□ -1.76
VPS13B-209ENST00000521559 GNAI1P63096 354 aa4.07□□□□□ -1.76
VPS13B-209ENST00000521559 FPGSQ05932 587 aa4.07□□□□□ -1.76
VPS13B-209ENST00000521559 SLFN5Q08AF3 891 aa4.07□□□□□ -1.76
VPS13B-209ENST00000521559 ZNF169Q14929 603 aaPredicted RBP4.07□□□□□ -1.76
VPS13B-209ENST00000521559 PCBP2Q15366 365 aaKnown RBP eCLIP4.07□□□□□ -1.76
VPS13B-209ENST00000521559 PTPN21Q16825 1174 aa4.07□□□□□ -1.76
VPS13B-209ENST00000521559 PTPROQ16827 1216 aa4.07□□□□□ -1.76
VPS13B-209ENST00000521559 UAP1L1Q3KQV9 507 aa4.07□□□□□ -1.76
VPS13B-209ENST00000521559 THEMIS2Q5TEJ8 643 aa4.07□□□□□ -1.76
VPS13B-209ENST00000521559 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.07□□□□□ -1.76
VPS13B-209ENST00000521559 ZNF365Q70YC5 407 aa4.07□□□□□ -1.76
VPS13B-209ENST00000521559 SIMC1Q8NDZ2 872 aa4.07□□□□□ -1.76
VPS13B-209ENST00000521559 NACC2Q96BF6 587 aa4.07□□□□□ -1.76
VPS13B-209ENST00000521559 LTV1Q96GA3 475 aaPredicted RBP4.07□□□□□ -1.76
VPS13B-209ENST00000521559 MRGPRX4Q96LA9 322 aa4.07□□□□□ -1.76
VPS13B-209ENST00000521559 CFAP53Q96M91 514 aa4.07□□□□□ -1.76
VPS13B-209ENST00000521559 INTS13Q9NVM9 706 aa4.07□□□□□ -1.76
VPS13B-209ENST00000521559 SIDT1Q9NXL6 827 aaKnown RBP4.07□□□□□ -1.76
VPS13B-209ENST00000521559 HSFX1Q9UBD0 423 aa4.07□□□□□ -1.76
VPS13B-209ENST00000521559 RGS17Q9UGC6 210 aaPredicted RBP4.07□□□□□ -1.76
VPS13B-209ENST00000521559 TRPC5Q9UL62 973 aaPredicted RBP4.07□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms