RNA–Protein interactions for RNA: ENST00000520878.5

CLK4-206, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 3,722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-206ENST00000520878 FZD8Q9H461 694 aa11.97□□□□□ -0.49
CLK4-206ENST00000520878 SSC5DA1L4H1 1573 aa11.97□□□□□ -0.49
CLK4-206ENST00000520878 PTPN20Q4JDL3 420 aa11.97□□□□□ -0.49
CLK4-206ENST00000520878 SRRM1Q8IYB3 904 aaKnown RBP11.97□□□□□ -0.49
CLK4-206ENST00000520878 BEST2Q8NFU1 509 aa11.97□□□□□ -0.49
CLK4-206ENST00000520878 RBM15Q96T37 977 aaKnown RBP eCLIP11.97□□□□□ -0.49
CLK4-206ENST00000520878 IKBKGQ9Y6K9 419 aa11.97□□□□□ -0.49
CLK4-206ENST00000520878 A6NNZ2 444 aa11.97□□□□□ -0.49
CLK4-206ENST00000520878 M0QZ92 97 aa11.97□□□□□ -0.49
CLK4-206ENST00000520878 ITIH2P19823 946 aa11.97□□□□□ -0.49
CLK4-206ENST00000520878 LMNB2Q03252 620 aa11.97□□□□□ -0.49
CLK4-206ENST00000520878 TUBB8Q3ZCM7 444 aa11.97□□□□□ -0.49
CLK4-206ENST00000520878 PIK3R5Q8WYR1 880 aa11.97□□□□□ -0.49
CLK4-206ENST00000520878 ARHGEF2Q92974 986 aaKnown RBP11.97□□□□□ -0.49
CLK4-206ENST00000520878 PCYOX1Q9UHG3 505 aa11.97□□□□□ -0.49
CLK4-206ENST00000520878 PSTPIP1O43586 416 aa11.96□□□□□ -0.49
CLK4-206ENST00000520878 MICAL2O94851 1124 aa11.96□□□□□ -0.49
CLK4-206ENST00000520878 MCF2P10911 925 aa11.96□□□□□ -0.49
CLK4-206ENST00000520878 HADHBP55084 474 aaKnown RBP11.96□□□□□ -0.49
CLK4-206ENST00000520878 ADCY2Q08462 1091 aa11.96□□□□□ -0.49
CLK4-206ENST00000520878 GOLGA7BQ2TAP0 167 aa11.96□□□□□ -0.49
CLK4-206ENST00000520878 SLC10A6Q3KNW5 377 aa11.96□□□□□ -0.49
CLK4-206ENST00000520878 CCDC121Q6ZUS5 278 aa11.96□□□□□ -0.49
CLK4-206ENST00000520878 NLRP14Q86W24 1093 aa11.96□□□□□ -0.49
CLK4-206ENST00000520878 PHF13Q86YI8 300 aaPredicted RBP11.96□□□□□ -0.49
CLK4-206ENST00000520878 PALM2Q8IXS6 379 aa11.96□□□□□ -0.49
CLK4-206ENST00000520878 ZBED8Q8IZ13 594 aa11.96□□□□□ -0.49
CLK4-206ENST00000520878 MREGQ8N565 214 aa11.96□□□□□ -0.49
CLK4-206ENST00000520878 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.96□□□□□ -0.49
CLK4-206ENST00000520878 OLIG1Q8TAK6 271 aa11.96□□□□□ -0.49
CLK4-206ENST00000520878 LRRN4Q8WUT4 740 aa11.96□□□□□ -0.49
CLK4-206ENST00000520878 TWNKQ96RR1 684 aa11.96□□□□□ -0.49
CLK4-206ENST00000520878 CCT8L2Q96SF2 557 aa11.96□□□□□ -0.49
CLK4-206ENST00000520878 CPXM1Q96SM3 734 aa11.96□□□□□ -0.49
CLK4-206ENST00000520878 NKIRAS1Q9NYS0 192 aa11.96□□□□□ -0.49
CLK4-206ENST00000520878 TSPAN16Q9UKR8 245 aa11.96□□□□□ -0.49
CLK4-206ENST00000520878 EXOC1LA0A1B0GW35 172 aa11.96□□□□□ -0.49
CLK4-206ENST00000520878 FOXO6A8MYZ6 492 aa11.96□□□□□ -0.49
CLK4-206ENST00000520878 MYO1CO00159 1063 aa11.96□□□□□ -0.49
CLK4-206ENST00000520878 FSCN2O14926 492 aa11.96□□□□□ -0.49
CLK4-206ENST00000520878 MCF2LO15068 1137 aa11.96□□□□□ -0.49
CLK4-206ENST00000520878 LGR5O75473 907 aa11.96□□□□□ -0.49
CLK4-206ENST00000520878 PIAS1O75925 651 aa11.96□□□□□ -0.49
CLK4-206ENST00000520878 CHKAP35790 457 aa11.96□□□□□ -0.49
CLK4-206ENST00000520878 PTGIRP43119 386 aa11.96□□□□□ -0.49
CLK4-206ENST00000520878 ZNF200P98182 395 aaPredicted RBP11.96□□□□□ -0.49
CLK4-206ENST00000520878 SPOCD1Q6ZMY3 1216 aa11.96□□□□□ -0.49
CLK4-206ENST00000520878 SCUBE3Q8IX30 993 aa11.96□□□□□ -0.49
CLK4-206ENST00000520878 EXD1Q8NHP7 514 aa11.96□□□□□ -0.49
CLK4-206ENST00000520878 DDX27Q96GQ7 796 aaKnown RBP11.96□□□□□ -0.49
CLK4-206ENST00000520878 VCPIP1Q96JH7 1222 aa11.96□□□□□ -0.49
CLK4-206ENST00000520878 HERPUD2Q9BSE4 406 aa11.96□□□□□ -0.49
CLK4-206ENST00000520878 TRAIPQ9BWF2 469 aa11.96□□□□□ -0.49
CLK4-206ENST00000520878 PDZD7Q9H5P4 517 aa11.96□□□□□ -0.49
CLK4-206ENST00000520878 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.96□□□□□ -0.49
CLK4-206ENST00000520878 LCMT1Q9UIC8 334 aa11.96□□□□□ -0.49
CLK4-206ENST00000520878 ZC3H4Q9UPT8 1303 aaKnown RBP11.96□□□□□ -0.49
CLK4-206ENST00000520878 KRT7P08729 469 aa11.96□□□□□ -0.5
CLK4-206ENST00000520878 SLC8A3P57103 927 aa11.96□□□□□ -0.5
CLK4-206ENST00000520878 GNASQ5JWF2 1037 aa11.96□□□□□ -0.5
CLK4-206ENST00000520878 PLEKHA7Q6IQ23 1121 aa11.96□□□□□ -0.5
CLK4-206ENST00000520878 ACTL9Q8TC94 416 aa11.96□□□□□ -0.5
CLK4-206ENST00000520878 SH3GL2Q99962 352 aa11.96□□□□□ -0.5
CLK4-206ENST00000520878 IFT122Q9HBG6 1241 aa11.96□□□□□ -0.5
CLK4-206ENST00000520878 ASNSD1Q9NWL6 643 aa11.96□□□□□ -0.5
CLK4-206ENST00000520878 FAM169AQ9Y6X4 670 aa11.96□□□□□ -0.5
CLK4-206ENST00000520878 TMEM191CA6NGB0 347 aa11.95□□□□□ -0.5
CLK4-206ENST00000520878 MTA2O94776 668 aa11.95□□□□□ -0.5
CLK4-206ENST00000520878 CHN1P15882 459 aa11.95□□□□□ -0.5
CLK4-206ENST00000520878 ECHS1P30084 290 aa11.95□□□□□ -0.5
CLK4-206ENST00000520878 PDIA2Q13087 525 aaKnown RBP11.95□□□□□ -0.5
CLK4-206ENST00000520878 C15orf59Q2T9L4 293 aaPredicted RBP11.95□□□□□ -0.5
CLK4-206ENST00000520878 KDM7AQ6ZMT4 941 aa11.95□□□□□ -0.5
CLK4-206ENST00000520878 CTAGE3PQ8IX95 158 aa11.95□□□□□ -0.5
CLK4-206ENST00000520878 BBOF1Q8ND07 529 aa11.95□□□□□ -0.5
CLK4-206ENST00000520878 PPTC7Q8NI37 304 aa11.95□□□□□ -0.5
CLK4-206ENST00000520878 C18orf25Q96B23 403 aaPredicted RBP11.95□□□□□ -0.5
CLK4-206ENST00000520878 THOC1Q96FV9 657 aaKnown RBP11.95□□□□□ -0.5
CLK4-206ENST00000520878 MAML3Q96JK9 1138 aa11.95□□□□□ -0.5
CLK4-206ENST00000520878 FGD4Q96M96 766 aa11.95□□□□□ -0.5
CLK4-206ENST00000520878 LPIN3Q9BQK8 851 aa11.95□□□□□ -0.5
CLK4-206ENST00000520878 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.95□□□□□ -0.5
CLK4-206ENST00000520878 ABT1Q9ULW3 272 aaKnown RBP11.95□□□□□ -0.5
CLK4-206ENST00000520878 NEU2Q9Y3R4 380 aa11.95□□□□□ -0.5
CLK4-206ENST00000520878 ADGRA2Q96PE1 1338 aa11.95□□□□□ -0.5
CLK4-206ENST00000520878 GMNCA6NCL1 334 aa11.95□□□□□ -0.5
CLK4-206ENST00000520878 ZBTB42B2RXF5 422 aa11.95□□□□□ -0.5
CLK4-206ENST00000520878 E5RJQ4 531 aa11.95□□□□□ -0.5
CLK4-206ENST00000520878 B4GALT4O60513 344 aa11.95□□□□□ -0.5
CLK4-206ENST00000520878 RARGP13631 454 aa11.95□□□□□ -0.5
CLK4-206ENST00000520878 EIF4BP23588 611 aaKnown RBP11.95□□□□□ -0.5
CLK4-206ENST00000520878 SDC4P31431 198 aa11.95□□□□□ -0.5
CLK4-206ENST00000520878 STX2P32856 288 aa11.95□□□□□ -0.5
CLK4-206ENST00000520878 OTUD4Q01804 1114 aaKnown RBP11.95□□□□□ -0.5
CLK4-206ENST00000520878 SMAD1Q15797 465 aaKnown RBP11.95□□□□□ -0.5
CLK4-206ENST00000520878 TLK2Q86UE8 772 aa11.95□□□□□ -0.5
CLK4-206ENST00000520878 ELOVL4Q9GZR5 314 aa11.95□□□□□ -0.5
CLK4-206ENST00000520878 SAMD15Q9P1V8 674 aa11.95□□□□□ -0.5
CLK4-206ENST00000520878 DNAJC25-GNG10A0A024R161 153 aa11.95□□□□□ -0.5
CLK4-206ENST00000520878 SNAI1O95863 264 aaPredicted RBP11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms