RNA–Protein interactions for RNA: ENST00000520687.1

SPARC-202, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 1,598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-202ENST00000520687 CNGA2Q16280 664 aa10.52□□□□□ -0.72
SPARC-202ENST00000520687 ZSCAN26Q16670 478 aa10.52□□□□□ -0.72
SPARC-202ENST00000520687 ODF2Q5BJF6 829 aa10.52□□□□□ -0.72
SPARC-202ENST00000520687 PPP1R15BQ5SWA1 713 aa10.52□□□□□ -0.72
SPARC-202ENST00000520687 CEP85LQ5SZL2 805 aa10.52□□□□□ -0.72
SPARC-202ENST00000520687 DDX42Q86XP3 938 aaKnown RBP eCLIP10.52□□□□□ -0.72
SPARC-202ENST00000520687 KIAA0319LQ8IZA0 1049 aa10.52□□□□□ -0.72
SPARC-202ENST00000520687 CCDC89Q8N998 374 aa10.52□□□□□ -0.72
SPARC-202ENST00000520687 C1orf127Q8N9H9 656 aa10.52□□□□□ -0.72
SPARC-202ENST00000520687 UBLCP1Q8WVY7 318 aaPredicted RBP10.52□□□□□ -0.72
SPARC-202ENST00000520687 TMEM176AQ96HP8 235 aa10.52□□□□□ -0.72
SPARC-202ENST00000520687 SCLT1Q96NL6 688 aa10.52□□□□□ -0.72
SPARC-202ENST00000520687 TRIM51Q9BSJ1 452 aa10.52□□□□□ -0.72
SPARC-202ENST00000520687 CAPS2Q9BXY5 557 aa10.52□□□□□ -0.72
SPARC-202ENST00000520687 OSBPL8Q9BZF1 889 aa10.52□□□□□ -0.72
SPARC-202ENST00000520687 DCLK3Q9C098 648 aa10.52□□□□□ -0.72
SPARC-202ENST00000520687 UBE2OQ9C0C9 1292 aaKnown RBP10.52□□□□□ -0.72
SPARC-202ENST00000520687 GRHL1Q9NZI5 618 aa10.52□□□□□ -0.72
SPARC-202ENST00000520687 SIX4Q9UIU6 781 aa10.52□□□□□ -0.72
SPARC-202ENST00000520687 DRG1Q9Y295 367 aaKnown RBP10.52□□□□□ -0.72
SPARC-202ENST00000520687 XPOTO43592 962 aaKnown RBP10.52□□□□□ -0.73
SPARC-202ENST00000520687 TSPAN1O60635 241 aa10.52□□□□□ -0.73
SPARC-202ENST00000520687 KPNA6O60684 536 aa10.52□□□□□ -0.73
SPARC-202ENST00000520687 CILPO75339 1184 aa10.52□□□□□ -0.73
SPARC-202ENST00000520687 KRT19P08727 400 aa10.52□□□□□ -0.73
SPARC-202ENST00000520687 IQCF3P0C7M6 154 aa10.52□□□□□ -0.73
SPARC-202ENST00000520687 ATF7P17544 494 aaPredicted RBP10.52□□□□□ -0.73
SPARC-202ENST00000520687 CD58P19256 250 aa10.52□□□□□ -0.73
SPARC-202ENST00000520687 GABRB2P47870 512 aa10.52□□□□□ -0.73
SPARC-202ENST00000520687 RAD23BP54727 409 aa10.52□□□□□ -0.73
SPARC-202ENST00000520687 GYS2P54840 703 aa10.52□□□□□ -0.73
SPARC-202ENST00000520687 PTPN11Q06124 597 aaPredicted RBP10.52□□□□□ -0.73
SPARC-202ENST00000520687 IFFO1Q0D2I5 559 aa10.52□□□□□ -0.73
SPARC-202ENST00000520687 MAP2K5Q13163 448 aa10.52□□□□□ -0.73
SPARC-202ENST00000520687 KLF1Q13351 362 aaPredicted RBP10.52□□□□□ -0.73
SPARC-202ENST00000520687 HADHQ16836 314 aaKnown RBP10.52□□□□□ -0.73
SPARC-202ENST00000520687 SLC10A6Q3KNW5 377 aa10.52□□□□□ -0.73
SPARC-202ENST00000520687 WDR72Q3MJ13 1102 aa10.52□□□□□ -0.73
SPARC-202ENST00000520687 TTMPQ5BVD1 217 aa10.52□□□□□ -0.73
SPARC-202ENST00000520687 MORN1Q5T089 497 aa10.52□□□□□ -0.73
SPARC-202ENST00000520687 OLFML2BQ68BL8 750 aa10.52□□□□□ -0.73
SPARC-202ENST00000520687 DENND2CQ68D51 928 aa10.52□□□□□ -0.73
SPARC-202ENST00000520687 JADE1Q6IE81 842 aa10.52□□□□□ -0.73
SPARC-202ENST00000520687 TTC27Q6P3X3 843 aa10.52□□□□□ -0.73
SPARC-202ENST00000520687 SLC27A1Q6PCB7 646 aa10.52□□□□□ -0.73
SPARC-202ENST00000520687 ZDHHC24Q6UX98 284 aa10.52□□□□□ -0.73
SPARC-202ENST00000520687 ADAT2Q7Z6V5 191 aaKnown RBP10.52□□□□□ -0.73
SPARC-202ENST00000520687 PASD1Q8IV76 773 aa10.52□□□□□ -0.73
SPARC-202ENST00000520687 NME8Q8N427 588 aa10.52□□□□□ -0.73
SPARC-202ENST00000520687 RIN2Q8WYP3 895 aaPredicted RBP10.52□□□□□ -0.73
SPARC-202ENST00000520687 SNF8Q96H20 258 aa10.52□□□□□ -0.73
SPARC-202ENST00000520687 HPDLQ96IR7 371 aa10.52□□□□□ -0.73
SPARC-202ENST00000520687 FAM161BQ96MY7 647 aa10.52□□□□□ -0.73
SPARC-202ENST00000520687 C1QTNF1Q9BXJ1 281 aa10.52□□□□□ -0.73
SPARC-202ENST00000520687 ROPN1BQ9BZX4 212 aaPredicted RBP10.52□□□□□ -0.73
SPARC-202ENST00000520687 ROPN1Q9HAT0 212 aaPredicted RBP10.52□□□□□ -0.73
SPARC-202ENST00000520687 NXF1Q9UBU9 619 aaKnown RBP10.52□□□□□ -0.73
SPARC-202ENST00000520687 CHORDC1Q9UHD1 332 aaPredicted RBP10.52□□□□□ -0.73
SPARC-202ENST00000520687 BARX2Q9UMQ3 279 aaPredicted RBP10.52□□□□□ -0.73
SPARC-202ENST00000520687 SNX24Q9Y343 169 aa10.52□□□□□ -0.73
SPARC-202ENST00000520687 MBLAC1A4D2B0 266 aaPredicted RBP10.51□□□□□ -0.73
SPARC-202ENST00000520687 F2P00734 622 aa10.51□□□□□ -0.73
SPARC-202ENST00000520687 RPLP2P05387 115 aaKnown RBP10.51□□□□□ -0.73
SPARC-202ENST00000520687 NFICP08651 508 aa10.51□□□□□ -0.73
SPARC-202ENST00000520687 FAM163BP0C2L3 166 aa10.51□□□□□ -0.73
SPARC-202ENST00000520687 SETSIPP0DME0 302 aa10.51□□□□□ -0.73
SPARC-202ENST00000520687 GNAT1P11488 350 aa10.51□□□□□ -0.73
SPARC-202ENST00000520687 CD19P15391 556 aa10.51□□□□□ -0.73
SPARC-202ENST00000520687 BRD2P25440 801 aaKnown RBP10.51□□□□□ -0.73
SPARC-202ENST00000520687 GRK4P32298 578 aa10.51□□□□□ -0.73
SPARC-202ENST00000520687 RDXP35241 583 aaKnown RBP10.51□□□□□ -0.73
SPARC-202ENST00000520687 RPL21P46778 160 aaKnown RBP10.51□□□□□ -0.73
SPARC-202ENST00000520687 CPT1AP50416 773 aa10.51□□□□□ -0.73
SPARC-202ENST00000520687 YARSP54577 528 aaKnown RBP10.51□□□□□ -0.73
SPARC-202ENST00000520687 PLTPP55058 493 aa10.51□□□□□ -0.73
SPARC-202ENST00000520687 ZNF844Q08AG5 666 aa10.51□□□□□ -0.73
SPARC-202ENST00000520687 NFX1Q12986 1120 aaKnown RBP10.51□□□□□ -0.73
SPARC-202ENST00000520687 TAF1CQ15572 869 aaPredicted RBP10.51□□□□□ -0.73
SPARC-202ENST00000520687 UAP1Q16222 522 aaPredicted RBP10.51□□□□□ -0.73
SPARC-202ENST00000520687 MARCH8Q5T0T0 291 aa10.51□□□□□ -0.73
SPARC-202ENST00000520687 C6orf118Q5T5N4 469 aa10.51□□□□□ -0.73
SPARC-202ENST00000520687 NOTUMQ6P988 496 aa10.51□□□□□ -0.73
SPARC-202ENST00000520687 CCDC50Q8IVM0 306 aa10.51□□□□□ -0.73
SPARC-202ENST00000520687 ZDHHC14Q8IZN3 488 aa10.51□□□□□ -0.73
SPARC-202ENST00000520687 LRRC52Q8N7C0 313 aa10.51□□□□□ -0.73
SPARC-202ENST00000520687 TTC13Q8NBP0 860 aa10.51□□□□□ -0.73
SPARC-202ENST00000520687 CXorf38Q8TB03 319 aa10.51□□□□□ -0.73
SPARC-202ENST00000520687 ARL8AQ96BM9 186 aa10.51□□□□□ -0.73
SPARC-202ENST00000520687 PGM2Q96G03 612 aa10.51□□□□□ -0.73
SPARC-202ENST00000520687 FAM84AQ96KN4 292 aa10.51□□□□□ -0.73
SPARC-202ENST00000520687 KATNAL1Q9BW62 490 aa10.51□□□□□ -0.73
SPARC-202ENST00000520687 NEUROG2Q9H2A3 272 aa10.51□□□□□ -0.73
SPARC-202ENST00000520687 ADAMTS10Q9H324 1103 aa10.51□□□□□ -0.73
SPARC-202ENST00000520687 CNOT10Q9H9A5 744 aaKnown RBP10.51□□□□□ -0.73
SPARC-202ENST00000520687 DPP3Q9NY33 737 aa10.51□□□□□ -0.73
SPARC-202ENST00000520687 CALCAP01258 141 aa10.5□□□□□ -0.73
SPARC-202ENST00000520687 CD4P01730 458 aa10.5□□□□□ -0.73
SPARC-202ENST00000520687 KRT14P02533 472 aa10.5□□□□□ -0.73
SPARC-202ENST00000520687 VTNP04004 478 aa10.5□□□□□ -0.73
SPARC-202ENST00000520687 ITGB3P05106 788 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms