RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 PSMC1P62191 440 aaKnown RBP17.32■□□□□ 0.36
IGHV3-42-201ENST00000520410 RPL10AP62906 217 aaKnown RBP17.32■□□□□ 0.36
IGHV3-42-201ENST00000520410 SNRNP35Q16560 246 aaKnown RBP17.32■□□□□ 0.36
IGHV3-42-201ENST00000520410 DDR2Q16832 855 aa17.32■□□□□ 0.36
IGHV3-42-201ENST00000520410 OSTM1Q86WC4 334 aa17.32■□□□□ 0.36
IGHV3-42-201ENST00000520410 MAB21L3Q8N8X9 362 aa17.32■□□□□ 0.36
IGHV3-42-201ENST00000520410 BPIFB1Q8TDL5 484 aa17.32■□□□□ 0.36
IGHV3-42-201ENST00000520410 ATRIPQ8WXE1 791 aa17.32■□□□□ 0.36
IGHV3-42-201ENST00000520410 MRPS31Q92665 395 aaKnown RBP17.32■□□□□ 0.36
IGHV3-42-201ENST00000520410 C7orf25Q9BPX7 421 aa17.32■□□□□ 0.36
IGHV3-42-201ENST00000520410 ACBD6Q9BR61 282 aa17.32■□□□□ 0.36
IGHV3-42-201ENST00000520410 LMAN1LQ9HAT1 526 aa17.32■□□□□ 0.36
IGHV3-42-201ENST00000520410 TRPV4Q9HBA0 871 aa17.32■□□□□ 0.36
IGHV3-42-201ENST00000520410 AGPAT3Q9NRZ7 376 aa17.32■□□□□ 0.36
IGHV3-42-201ENST00000520410 EXOC1Q9NV70 894 aa17.32■□□□□ 0.36
IGHV3-42-201ENST00000520410 THG1LQ9NWX6 298 aaKnown RBP17.32■□□□□ 0.36
IGHV3-42-201ENST00000520410 UBE4BO95155 1302 aa17.31■□□□□ 0.36
IGHV3-42-201ENST00000520410 PTPRJQ12913 1337 aa17.31■□□□□ 0.36
IGHV3-42-201ENST00000520410 CHADO15335 359 aa17.31■□□□□ 0.36
IGHV3-42-201ENST00000520410 PHACTR2O75167 634 aa17.31■□□□□ 0.36
IGHV3-42-201ENST00000520410 PRAMEF12O95522 483 aa17.31■□□□□ 0.36
IGHV3-42-201ENST00000520410 CYP2F1P24903 491 aa17.31■□□□□ 0.36
IGHV3-42-201ENST00000520410 LHX1P48742 406 aa17.31■□□□□ 0.36
IGHV3-42-201ENST00000520410 TNNC1P63316 161 aa17.31■□□□□ 0.36
IGHV3-42-201ENST00000520410 CYP27A1Q02318 531 aa17.31■□□□□ 0.36
IGHV3-42-201ENST00000520410 TRPC3Q13507 836 aa17.31■□□□□ 0.36
IGHV3-42-201ENST00000520410 CUL4BQ13620 913 aa17.31■□□□□ 0.36
IGHV3-42-201ENST00000520410 PPP2R5DQ14738 602 aa17.31■□□□□ 0.36
IGHV3-42-201ENST00000520410 ARHGAP29Q52LW3 1261 aa17.31■□□□□ 0.36
IGHV3-42-201ENST00000520410 RESP18Q5W5W9 173 aa17.31■□□□□ 0.36
IGHV3-42-201ENST00000520410 SCARA3Q6AZY7 606 aa17.31■□□□□ 0.36
IGHV3-42-201ENST00000520410 WDR49Q8IV35 697 aa17.31■□□□□ 0.36
IGHV3-42-201ENST00000520410 TOP6BLQ8N6T0 577 aa17.31■□□□□ 0.36
IGHV3-42-201ENST00000520410 SYT15Q9BQS2 421 aa17.31■□□□□ 0.36
IGHV3-42-201ENST00000520410 SNX25Q9H3E2 840 aa17.31■□□□□ 0.36
IGHV3-42-201ENST00000520410 SEMA4AQ9H3S1 761 aa17.31■□□□□ 0.36
IGHV3-42-201ENST00000520410 SERTAD1Q9UHV2 236 aa17.31■□□□□ 0.36
IGHV3-42-201ENST00000520410 SIX4Q9UIU6 781 aa17.31■□□□□ 0.36
IGHV3-42-201ENST00000520410 FBXO4Q9UKT5 387 aa17.31■□□□□ 0.36
IGHV3-42-201ENST00000520410 EXOC3O60645 756 aa17.3■□□□□ 0.36
IGHV3-42-201ENST00000520410 PDGFRBP09619 1106 aa17.3■□□□□ 0.36
IGHV3-42-201ENST00000520410 MTAPQ13126 283 aa17.3■□□□□ 0.36
IGHV3-42-201ENST00000520410 LRRC32Q14392 662 aa17.3■□□□□ 0.36
IGHV3-42-201ENST00000520410 CCDC142Q17RM4 750 aa17.3■□□□□ 0.36
IGHV3-42-201ENST00000520410 ATL3Q6DD88 541 aa17.3■□□□□ 0.36
IGHV3-42-201ENST00000520410 CC2D1AQ6P1N0 951 aaPredicted RBP17.3■□□□□ 0.36
IGHV3-42-201ENST00000520410 C4orf50Q6ZRC1 276 aa17.3■□□□□ 0.36
IGHV3-42-201ENST00000520410 XXYLT1Q8NBI6 393 aa17.3■□□□□ 0.36
IGHV3-42-201ENST00000520410 ZNF507Q8TCN5 953 aa17.3■□□□□ 0.36
IGHV3-42-201ENST00000520410 SPATA32Q96LK8 384 aa17.3■□□□□ 0.36
IGHV3-42-201ENST00000520410 CGRRF1Q99675 332 aa17.3■□□□□ 0.36
IGHV3-42-201ENST00000520410 GDAP2Q9NXN4 497 aa17.3■□□□□ 0.36
IGHV3-42-201ENST00000520410 GTSE1Q9NYZ3 720 aa17.3■□□□□ 0.36
IGHV3-42-201ENST00000520410 NCDNQ9UBB6 729 aa17.3■□□□□ 0.36
IGHV3-42-201ENST00000520410 UXTQ9UBK9 157 aaPredicted RBP17.3■□□□□ 0.36
IGHV3-42-201ENST00000520410 GTF3C3Q9Y5Q9 886 aa17.3■□□□□ 0.36
IGHV3-42-201ENST00000520410 ANXA13P27216 316 aa17.29■□□□□ 0.36
IGHV3-42-201ENST00000520410 RPS9P46781 194 aaKnown RBP17.29■□□□□ 0.36
IGHV3-42-201ENST00000520410 NLRP12P59046 1061 aa17.29■□□□□ 0.36
IGHV3-42-201ENST00000520410 BIRC3Q13489 604 aa17.29■□□□□ 0.36
IGHV3-42-201ENST00000520410 SOWAHAQ2M3V2 549 aa17.29■□□□□ 0.36
IGHV3-42-201ENST00000520410 TXNDC8Q6A555 127 aa17.29■□□□□ 0.36
IGHV3-42-201ENST00000520410 TRAPPC11Q7Z392 1133 aa17.29■□□□□ 0.36
IGHV3-42-201ENST00000520410 KIAA2013Q8IYS2 634 aa17.29■□□□□ 0.36
IGHV3-42-201ENST00000520410 CMTM8Q8IZV2 173 aa17.29■□□□□ 0.36
IGHV3-42-201ENST00000520410 CELF5Q8N6W0 485 aaKnown RBP17.29■□□□□ 0.36
IGHV3-42-201ENST00000520410 OR6B3Q8NGW1 331 aa17.29■□□□□ 0.36
IGHV3-42-201ENST00000520410 LEO1Q8WVC0 666 aaPredicted RBP17.29■□□□□ 0.36
IGHV3-42-201ENST00000520410 SCFD1Q8WVM8 642 aa17.29■□□□□ 0.36
IGHV3-42-201ENST00000520410 CLDN23Q96B33 292 aa17.29■□□□□ 0.36
IGHV3-42-201ENST00000520410 MKNK1Q9BUB5 465 aa17.29■□□□□ 0.36
IGHV3-42-201ENST00000520410 C8orf33Q9H7E9 229 aaPredicted RBP17.29■□□□□ 0.36
IGHV3-42-201ENST00000520410 IL21Q9HBE4 155 aa17.29■□□□□ 0.36
IGHV3-42-201ENST00000520410 TRPV5Q9NQA5 729 aa17.29■□□□□ 0.36
IGHV3-42-201ENST00000520410 MAGEC2Q9UBF1 373 aaPredicted RBP17.29■□□□□ 0.36
IGHV3-42-201ENST00000520410 A0A1B0GVL5 298 aa17.28■□□□□ 0.36
IGHV3-42-201ENST00000520410 MYBPHLA2RUH7 354 aa17.28■□□□□ 0.36
IGHV3-42-201ENST00000520410 SPECC1L-ADORA2AF8WAN1 911 aa17.28■□□□□ 0.36
IGHV3-42-201ENST00000520410 TGFB1I1O43294 461 aa17.28■□□□□ 0.36
IGHV3-42-201ENST00000520410 ATP2C2O75185 946 aa17.28■□□□□ 0.36
IGHV3-42-201ENST00000520410 CKMP06732 381 aa17.28■□□□□ 0.36
IGHV3-42-201ENST00000520410 HOXD13P35453 343 aa17.28■□□□□ 0.36
IGHV3-42-201ENST00000520410 GRIK1P39086 918 aa17.28■□□□□ 0.36
IGHV3-42-201ENST00000520410 KRT85P78386 507 aa17.28■□□□□ 0.36
IGHV3-42-201ENST00000520410 PLCB2Q00722 1185 aa17.28■□□□□ 0.36
IGHV3-42-201ENST00000520410 TNK2Q07912 1038 aa17.28■□□□□ 0.36
IGHV3-42-201ENST00000520410 CYP24A1Q07973 514 aa17.28■□□□□ 0.36
IGHV3-42-201ENST00000520410 FCHO2Q0JRZ9 810 aa17.28■□□□□ 0.36
IGHV3-42-201ENST00000520410 IFRD2Q12894 506 aaPredicted RBP17.28■□□□□ 0.36
IGHV3-42-201ENST00000520410 PON2Q15165 354 aa17.28■□□□□ 0.36
IGHV3-42-201ENST00000520410 EPM2AIP1Q7L775 607 aaPredicted RBP17.28■□□□□ 0.36
IGHV3-42-201ENST00000520410 MAML2Q8IZL2 1156 aaPredicted RBP17.28■□□□□ 0.36
IGHV3-42-201ENST00000520410 MYLPFQ96A32 169 aa17.28■□□□□ 0.36
IGHV3-42-201ENST00000520410 MSANTD3Q96H12 275 aa17.28■□□□□ 0.36
IGHV3-42-201ENST00000520410 SLC46A2Q9BY10 475 aa17.28■□□□□ 0.36
IGHV3-42-201ENST00000520410 RBM12Q9NTZ6 932 aaKnown RBP17.28■□□□□ 0.36
IGHV3-42-201ENST00000520410 OBP2AQ9NY56 170 aa17.28■□□□□ 0.36
IGHV3-42-201ENST00000520410 NXF1Q9UBU9 619 aaKnown RBP17.28■□□□□ 0.36
IGHV3-42-201ENST00000520410 PATJQ8NI35 1801 aa17.27■□□□□ 0.36
IGHV3-42-201ENST00000520410 PVALEFA0A1B0GWK0 134 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms