RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 SLC14A1Q13336 389 aa5.36□□□□□ -1.55
SDCBP-207ENST00000520168 BYSLQ13895 437 aaKnown RBP5.36□□□□□ -1.55
SDCBP-207ENST00000520168 CAPSQ13938 189 aa5.36□□□□□ -1.55
SDCBP-207ENST00000520168 TEAD2Q15562 447 aa5.36□□□□□ -1.55
SDCBP-207ENST00000520168 DBN1Q16643 649 aa5.36□□□□□ -1.55
SDCBP-207ENST00000520168 FAM187BQ17R55 369 aa5.36□□□□□ -1.55
SDCBP-207ENST00000520168 DCAF4L1Q3SXM0 396 aa5.36□□□□□ -1.55
SDCBP-207ENST00000520168 PEAR1Q5VY43 1037 aaPredicted RBP5.36□□□□□ -1.55
SDCBP-207ENST00000520168 B4GALNT3Q6L9W6 998 aa5.36□□□□□ -1.55
SDCBP-207ENST00000520168 ZNF605Q86T29 641 aa5.36□□□□□ -1.55
SDCBP-207ENST00000520168 SYT12Q8IV01 421 aa5.36□□□□□ -1.55
SDCBP-207ENST00000520168 ARID3BQ8IVW6 561 aaPredicted RBP5.36□□□□□ -1.55
SDCBP-207ENST00000520168 ZBTB8OSQ8IWT0 167 aa5.36□□□□□ -1.55
SDCBP-207ENST00000520168 TSTD1Q8NFU3 115 aa5.36□□□□□ -1.55
SDCBP-207ENST00000520168 SHKBP1Q8TBC3 707 aa5.36□□□□□ -1.55
SDCBP-207ENST00000520168 ETNPPLQ8TBG4 499 aa5.36□□□□□ -1.55
SDCBP-207ENST00000520168 ADAMTS14Q8WXS8 1223 aa5.36□□□□□ -1.55
SDCBP-207ENST00000520168 LRIG1Q96JA1 1093 aa5.36□□□□□ -1.55
SDCBP-207ENST00000520168 SPACA7Q96KW9 195 aa5.36□□□□□ -1.55
SDCBP-207ENST00000520168 CNOT6LQ96LI5 555 aaKnown RBP5.36□□□□□ -1.55
SDCBP-207ENST00000520168 CCDC43Q96MW1 224 aaKnown RBP5.36□□□□□ -1.55
SDCBP-207ENST00000520168 HHIPQ96QV1 700 aa5.36□□□□□ -1.55
SDCBP-207ENST00000520168 LXNQ9BS40 222 aa5.36□□□□□ -1.55
SDCBP-207ENST00000520168 C2orf40Q9H1Z8 148 aa5.36□□□□□ -1.55
SDCBP-207ENST00000520168 SLKQ9H2G2 1235 aaPredicted RBP5.36□□□□□ -1.55
SDCBP-207ENST00000520168 ZSWIM4Q9H7M6 989 aa5.36□□□□□ -1.55
SDCBP-207ENST00000520168 KIF9Q9HAQ2 790 aa5.36□□□□□ -1.55
SDCBP-207ENST00000520168 SH3GLB2Q9NR46 395 aa5.36□□□□□ -1.55
SDCBP-207ENST00000520168 SLC38A7Q9NVC3 462 aa5.36□□□□□ -1.55
SDCBP-207ENST00000520168 HSFX1Q9UBD0 423 aa5.36□□□□□ -1.55
SDCBP-207ENST00000520168 DYRK1BQ9Y463 629 aa5.36□□□□□ -1.55
SDCBP-207ENST00000520168 TAF6LQ9Y6J9 622 aa5.36□□□□□ -1.55
SDCBP-207ENST00000520168 NCANO14594 1321 aa5.36□□□□□ -1.55
SDCBP-207ENST00000520168 NID2Q14112 1375 aa5.36□□□□□ -1.55
SDCBP-207ENST00000520168 COL12A1Q99715 3063 aa5.36□□□□□ -1.55
SDCBP-207ENST00000520168 TCHHQ07283 1943 aa5.35□□□□□ -1.55
SDCBP-207ENST00000520168 MUC22E2RYF6 1773 aaPredicted RBP5.35□□□□□ -1.55
SDCBP-207ENST00000520168 A0A087WV48 116 aa5.35□□□□□ -1.55
SDCBP-207ENST00000520168 SPAARA0A1B0GVQ0 90 aa5.35□□□□□ -1.55
SDCBP-207ENST00000520168 A0A1W2PRU2 124 aa5.35□□□□□ -1.55
SDCBP-207ENST00000520168 PATE3B3GLJ2 98 aa5.35□□□□□ -1.55
SDCBP-207ENST00000520168 E9PAM4 449 aa5.35□□□□□ -1.55
SDCBP-207ENST00000520168 TBX3O15119 743 aa5.35□□□□□ -1.55
SDCBP-207ENST00000520168 ATXN7O15265 892 aaPredicted RBP5.35□□□□□ -1.55
SDCBP-207ENST00000520168 MEFVO15553 781 aaPredicted RBP5.35□□□□□ -1.55
SDCBP-207ENST00000520168 PRPF3O43395 683 aaKnown RBP5.35□□□□□ -1.55
SDCBP-207ENST00000520168 ALDH1A2O94788 518 aa5.35□□□□□ -1.55
SDCBP-207ENST00000520168 PLA2G2AP14555 144 aa5.35□□□□□ -1.55
SDCBP-207ENST00000520168 CPB1P15086 417 aa5.35□□□□□ -1.55
SDCBP-207ENST00000520168 ENGP17813 658 aa5.35□□□□□ -1.55
SDCBP-207ENST00000520168 DDX6P26196 483 aaKnown RBP eCLIP5.35□□□□□ -1.55
SDCBP-207ENST00000520168 CHMLP26374 656 aa5.35□□□□□ -1.55
SDCBP-207ENST00000520168 CDC25CP30307 473 aa5.35□□□□□ -1.55
SDCBP-207ENST00000520168 RPL9P32969 192 aaKnown RBP5.35□□□□□ -1.55
SDCBP-207ENST00000520168 ARL2P36404 184 aa5.35□□□□□ -1.55
SDCBP-207ENST00000520168 ALDH1A3P47895 512 aa5.35□□□□□ -1.55
SDCBP-207ENST00000520168 DHPSP49366 369 aaPredicted RBP5.35□□□□□ -1.55
SDCBP-207ENST00000520168 DGKEP52429 567 aa5.35□□□□□ -1.55
SDCBP-207ENST00000520168 EPHB3P54753 998 aa5.35□□□□□ -1.55
SDCBP-207ENST00000520168 CYP4A11Q02928 519 aa5.35□□□□□ -1.55
SDCBP-207ENST00000520168 RUNX3Q13761 415 aa5.35□□□□□ -1.55
SDCBP-207ENST00000520168 MRPL58Q14197 206 aaKnown RBP5.35□□□□□ -1.55
SDCBP-207ENST00000520168 DMC1Q14565 340 aa5.35□□□□□ -1.55
SDCBP-207ENST00000520168 EPHA7Q15375 998 aa5.35□□□□□ -1.55
SDCBP-207ENST00000520168 DUOXA1Q1HG43 343 aa5.35□□□□□ -1.55
SDCBP-207ENST00000520168 CTXN3Q4LDR2 81 aa5.35□□□□□ -1.55
SDCBP-207ENST00000520168 TMEM259Q4ZIN3 620 aa5.35□□□□□ -1.55
SDCBP-207ENST00000520168 XKR9Q5GH70 373 aa5.35□□□□□ -1.55
SDCBP-207ENST00000520168 XP32Q5T750 250 aa5.35□□□□□ -1.55
SDCBP-207ENST00000520168 RNF20Q5VTR2 975 aa5.35□□□□□ -1.55
SDCBP-207ENST00000520168 CDCA2Q69YH5 1023 aaPredicted RBP5.35□□□□□ -1.55
SDCBP-207ENST00000520168 FSTL4Q6MZW2 842 aa5.35□□□□□ -1.55
SDCBP-207ENST00000520168 PKN3Q6P5Z2 889 aa5.35□□□□□ -1.55
SDCBP-207ENST00000520168 CCNI2Q6ZMN8 369 aaPredicted RBP5.35□□□□□ -1.55
SDCBP-207ENST00000520168 RIPOR1Q6ZS17 1223 aa5.35□□□□□ -1.55
SDCBP-207ENST00000520168 LPCAT2Q7L5N7 544 aa5.35□□□□□ -1.55
SDCBP-207ENST00000520168 ITIH5Q86UX2 942 aa5.35□□□□□ -1.55
SDCBP-207ENST00000520168 RASSF3Q86WH2 238 aa5.35□□□□□ -1.55
SDCBP-207ENST00000520168 RAB11FIP4Q86YS3 637 aa5.35□□□□□ -1.55
SDCBP-207ENST00000520168 CHCHD4Q8N4Q1 142 aa5.35□□□□□ -1.55
SDCBP-207ENST00000520168 APPL2Q8NEU8 664 aa5.35□□□□□ -1.55
SDCBP-207ENST00000520168 BEST2Q8NFU1 509 aa5.35□□□□□ -1.55
SDCBP-207ENST00000520168 RPLP0P6Q8NHW5 317 aa5.35□□□□□ -1.55
SDCBP-207ENST00000520168 TBCKQ8TEA7 893 aa5.35□□□□□ -1.55
SDCBP-207ENST00000520168 HNRNPLLQ8WVV9 542 aaKnown RBP5.35□□□□□ -1.55
SDCBP-207ENST00000520168 PIGKQ92643 395 aa5.35□□□□□ -1.55
SDCBP-207ENST00000520168 RSPRY1Q96DX4 576 aa5.35□□□□□ -1.55
SDCBP-207ENST00000520168 PPP1R10Q96QC0 940 aaKnown RBP5.35□□□□□ -1.55
SDCBP-207ENST00000520168 GCNAQ96QF7 691 aa5.35□□□□□ -1.55
SDCBP-207ENST00000520168 KIF2CQ99661 725 aa5.35□□□□□ -1.55
SDCBP-207ENST00000520168 NAP1L4Q99733 375 aaKnown RBP5.35□□□□□ -1.55
SDCBP-207ENST00000520168 PI4K2AQ9BTU6 479 aa5.35□□□□□ -1.55
SDCBP-207ENST00000520168 CYLDQ9NQC7 956 aa5.35□□□□□ -1.55
SDCBP-207ENST00000520168 TOPORSQ9NS56 1045 aaPredicted RBP5.35□□□□□ -1.55
SDCBP-207ENST00000520168 SNTG2Q9NY99 539 aa5.35□□□□□ -1.55
SDCBP-207ENST00000520168 KIAA1522Q9P206 1035 aaPredicted RBP5.35□□□□□ -1.55
SDCBP-207ENST00000520168 CEP72Q9P209 647 aa5.35□□□□□ -1.55
SDCBP-207ENST00000520168 CACNG4Q9UBN1 327 aa5.35□□□□□ -1.55
SDCBP-207ENST00000520168 APOBEC2Q9Y235 224 aaKnown RBP5.35□□□□□ -1.55
SDCBP-207ENST00000520168 PCDHB9Q9Y5E1 797 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 162.7 ms