RNA–Protein interactions for RNA: ENST00000520133.5

COL13A1-212, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL13A1, Length 1,833 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-212ENST00000520133 SSR1P43307 286 aaKnown RBP28.5■■■□□ 2.15
COL13A1-212ENST00000520133 TAF6P49848 677 aa28.5■■■□□ 2.15
COL13A1-212ENST00000520133 DR1Q01658 176 aa28.5■■■□□ 2.15
COL13A1-212ENST00000520133 MGAT3Q09327 533 aa28.5■■■□□ 2.15
COL13A1-212ENST00000520133 MAP3K21Q5TCX8 1036 aa28.5■■■□□ 2.15
COL13A1-212ENST00000520133 KATNAL2Q8IYT4 538 aa28.5■■■□□ 2.15
COL13A1-212ENST00000520133 PRELID2Q8N945 189 aa28.5■■■□□ 2.15
COL13A1-212ENST00000520133 RAET1EQ8TD07 263 aa28.5■■■□□ 2.15
COL13A1-212ENST00000520133 IPO4Q8TEX9 1081 aaKnown RBP28.5■■■□□ 2.15
COL13A1-212ENST00000520133 GDAP1L1Q96MZ0 367 aa28.5■■■□□ 2.15
COL13A1-212ENST00000520133 RNF19AQ9NV58 838 aa28.5■■■□□ 2.15
COL13A1-212ENST00000520133 TSPAN16Q9UKR8 245 aa28.5■■■□□ 2.15
COL13A1-212ENST00000520133 THSD7BQ9C0I4 1608 aa28.49■■■□□ 2.15
COL13A1-212ENST00000520133 FAM187AA6NFU0 413 aa28.49■■■□□ 2.15
COL13A1-212ENST00000520133 KPNA7A9QM74 516 aa28.49■■■□□ 2.15
COL13A1-212ENST00000520133 FSCN2O14926 492 aa28.49■■■□□ 2.15
COL13A1-212ENST00000520133 GNRH1P01148 92 aa28.49■■■□□ 2.15
COL13A1-212ENST00000520133 KRT3P12035 628 aa28.49■■■□□ 2.15
COL13A1-212ENST00000520133 GABRB2P47870 512 aa28.49■■■□□ 2.15
COL13A1-212ENST00000520133 PDCLQ13371 301 aa28.49■■■□□ 2.15
COL13A1-212ENST00000520133 SV2CQ496J9 727 aa28.49■■■□□ 2.15
COL13A1-212ENST00000520133 ARRDC4Q8NCT1 418 aa28.49■■■□□ 2.15
COL13A1-212ENST00000520133 MAGOHBQ96A72 148 aaKnown RBP28.49■■■□□ 2.15
COL13A1-212ENST00000520133 FAM105AQ9NUU6 356 aa28.49■■■□□ 2.15
COL13A1-212ENST00000520133 GDAP2Q9NXN4 497 aa28.49■■■□□ 2.15
COL13A1-212ENST00000520133 BHMG1C9JSJ3 638 aaPredicted RBP28.48■■■□□ 2.15
COL13A1-212ENST00000520133 THPOP40225 353 aa28.48■■■□□ 2.15
COL13A1-212ENST00000520133 TAS2R40P59535 323 aa28.48■■■□□ 2.15
COL13A1-212ENST00000520133 NIPA2Q8N8Q9 360 aa28.48■■■□□ 2.15
COL13A1-212ENST00000520133 OR6B3Q8NGW1 331 aa28.48■■■□□ 2.15
COL13A1-212ENST00000520133 UBXN6Q9BZV1 441 aa28.48■■■□□ 2.15
COL13A1-212ENST00000520133 RASAL2Q9UJF2 1139 aa28.48■■■□□ 2.15
COL13A1-212ENST00000520133 GOLGA8SH3BPF8 625 aa28.48■■■□□ 2.15
COL13A1-212ENST00000520133 CETN2P41208 172 aa28.48■■■□□ 2.15
COL13A1-212ENST00000520133 CYP1B1Q16678 543 aa28.48■■■□□ 2.15
COL13A1-212ENST00000520133 SOWAHAQ2M3V2 549 aa28.48■■■□□ 2.15
COL13A1-212ENST00000520133 XYLT1Q86Y38 959 aa28.48■■■□□ 2.15
COL13A1-212ENST00000520133 PXYLP1Q8TE99 480 aa28.48■■■□□ 2.15
COL13A1-212ENST00000520133 GRIN2DO15399 1336 aa28.47■■■□□ 2.15
COL13A1-212ENST00000520133 HLTFQ14527 1009 aaKnown RBP eCLIP28.47■■■□□ 2.15
COL13A1-212ENST00000520133 LRRC38Q5VT99 294 aa28.47■■■□□ 2.15
COL13A1-212ENST00000520133 DAB2IPQ5VWQ8 1189 aa28.47■■■□□ 2.15
COL13A1-212ENST00000520133 CCDC50Q8IVM0 306 aa28.47■■■□□ 2.15
COL13A1-212ENST00000520133 EXD1Q8NHP7 514 aa28.47■■■□□ 2.15
COL13A1-212ENST00000520133 UBA3Q8TBC4 463 aa28.47■■■□□ 2.15
COL13A1-212ENST00000520133 FNIP1Q8TF40 1166 aa28.47■■■□□ 2.15
COL13A1-212ENST00000520133 FAM114A2Q9NRY5 505 aa28.47■■■□□ 2.15
COL13A1-212ENST00000520133 SLC38A7Q9NVC3 462 aa28.47■■■□□ 2.15
COL13A1-212ENST00000520133 PCYOX1Q9UHG3 505 aa28.47■■■□□ 2.15
COL13A1-212ENST00000520133 HPCAL4Q9UM19 191 aa28.47■■■□□ 2.15
COL13A1-212ENST00000520133 NOD1Q9Y239 953 aa28.47■■■□□ 2.15
COL13A1-212ENST00000520133 A8MXQ7 604 aa28.46■■■□□ 2.15
COL13A1-212ENST00000520133 ERBB2P04626 1255 aa28.46■■■□□ 2.15
COL13A1-212ENST00000520133 LRPAP1P30533 357 aa28.46■■■□□ 2.15
COL13A1-212ENST00000520133 APLP1P51693 650 aa28.46■■■□□ 2.15
COL13A1-212ENST00000520133 SOX4Q06945 474 aaPredicted RBP28.46■■■□□ 2.15
COL13A1-212ENST00000520133 ZNF252P-AS1Q0IIN9 211 aa28.46■■■□□ 2.15
COL13A1-212ENST00000520133 ITGA7Q13683 1181 aa28.46■■■□□ 2.15
COL13A1-212ENST00000520133 ACOT1Q86TX2 421 aa28.46■■■□□ 2.15
COL13A1-212ENST00000520133 C12orf29Q8N999 325 aa28.46■■■□□ 2.15
COL13A1-212ENST00000520133 RARAP10276 462 aa28.46■■■□□ 2.15
COL13A1-212ENST00000520133 MAP2K2P36507 400 aa28.46■■■□□ 2.15
COL13A1-212ENST00000520133 PTK7Q13308 1070 aa28.46■■■□□ 2.15
COL13A1-212ENST00000520133 GOLGA7BQ2TAP0 167 aa28.46■■■□□ 2.15
COL13A1-212ENST00000520133 CCDC137Q6PK04 289 aaKnown RBP28.46■■■□□ 2.15
COL13A1-212ENST00000520133 ZDHHC14Q8IZN3 488 aa28.46■■■□□ 2.15
COL13A1-212ENST00000520133 C12orf50Q8NA57 414 aaPredicted RBP28.46■■■□□ 2.15
COL13A1-212ENST00000520133 APPL2Q8NEU8 664 aa28.46■■■□□ 2.15
COL13A1-212ENST00000520133 SEC14L1Q92503 715 aa28.46■■■□□ 2.15
COL13A1-212ENST00000520133 GOLGA2P5Q9HBQ8 144 aa28.46■■■□□ 2.15
COL13A1-212ENST00000520133 HESX1Q9UBX0 185 aa28.46■■■□□ 2.15
COL13A1-212ENST00000520133 TJP2Q9UDY2 1190 aa28.46■■■□□ 2.15
COL13A1-212ENST00000520133 GTF3C5Q9Y5Q8 519 aaPredicted RBP28.46■■■□□ 2.15
COL13A1-212ENST00000520133 CENPFP49454 3210 aa28.45■■■□□ 2.15
COL13A1-212ENST00000520133 TCRBV7S2A1N4TA0A589 114 aa28.45■■■□□ 2.14
COL13A1-212ENST00000520133 SETSIPP0DME0 302 aa28.45■■■□□ 2.14
COL13A1-212ENST00000520133 RFC1P35251 1148 aaPredicted RBP28.45■■■□□ 2.14
COL13A1-212ENST00000520133 FNTAP49354 379 aa28.45■■■□□ 2.14
COL13A1-212ENST00000520133 OGDHQ02218 1023 aa28.45■■■□□ 2.14
COL13A1-212ENST00000520133 SIX1Q15475 284 aaPredicted RBP28.45■■■□□ 2.14
COL13A1-212ENST00000520133 PPP1R26Q5T8A7 1209 aaPredicted RBP28.45■■■□□ 2.14
COL13A1-212ENST00000520133 MCRS1Q96EZ8 462 aa28.45■■■□□ 2.14
COL13A1-212ENST00000520133 PPP1R10Q96QC0 940 aaKnown RBP28.45■■■□□ 2.14
COL13A1-212ENST00000520133 ST7Q9NRC1 585 aa28.45■■■□□ 2.14
COL13A1-212ENST00000520133 F8VP50 259 aa28.44■■■□□ 2.14
COL13A1-212ENST00000520133 PTGESO14684 152 aa28.44■■■□□ 2.14
COL13A1-212ENST00000520133 HUS1O60921 280 aa28.44■■■□□ 2.14
COL13A1-212ENST00000520133 PSMA2P25787 234 aa28.44■■■□□ 2.14
COL13A1-212ENST00000520133 ACLYP53396 1101 aa28.44■■■□□ 2.14
COL13A1-212ENST00000520133 TRADDQ15628 312 aa28.44■■■□□ 2.14
COL13A1-212ENST00000520133 RBM41Q96IZ5 413 aaKnown RBP28.44■■■□□ 2.14
COL13A1-212ENST00000520133 SNX25Q9H3E2 840 aa28.44■■■□□ 2.14
COL13A1-212ENST00000520133 PODXLO00592 558 aa28.43■■■□□ 2.14
COL13A1-212ENST00000520133 GJC1P36383 396 aa28.43■■■□□ 2.14
COL13A1-212ENST00000520133 GNL1P36915 607 aaPredicted RBP28.43■■■□□ 2.14
COL13A1-212ENST00000520133 COILP38432 576 aaPredicted RBP28.43■■■□□ 2.14
COL13A1-212ENST00000520133 HSP90B2PQ58FF3 399 aa28.43■■■□□ 2.14
COL13A1-212ENST00000520133 JAMLQ86YT9 394 aa28.43■■■□□ 2.14
COL13A1-212ENST00000520133 RCOR2Q8IZ40 523 aa28.43■■■□□ 2.14
COL13A1-212ENST00000520133 ZFP42Q96MM3 310 aa28.43■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms