RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 NAPAP54920 295 aa14.21□□□□□ -0.13
PABPC1-208ENST00000519004 SNRNP48Q6IEG0 339 aaKnown RBP14.21□□□□□ -0.13
PABPC1-208ENST00000519004 SLC7A5P1Q8MH63 180 aa14.21□□□□□ -0.13
PABPC1-208ENST00000519004 LARGE2Q8N3Y3 721 aa14.21□□□□□ -0.13
PABPC1-208ENST00000519004 BBOF1Q8ND07 529 aa14.21□□□□□ -0.13
PABPC1-208ENST00000519004 AGPAT1Q99943 283 aa14.21□□□□□ -0.13
PABPC1-208ENST00000519004 CCDC106Q9BWC9 280 aa14.21□□□□□ -0.13
PABPC1-208ENST00000519004 PSTPIP2Q9H939 334 aa14.21□□□□□ -0.13
PABPC1-208ENST00000519004 PPARGC1AQ9UBK2 798 aaKnown RBP14.21□□□□□ -0.13
PABPC1-208ENST00000519004 PADI4Q9UM07 663 aa14.21□□□□□ -0.13
PABPC1-208ENST00000519004 MEGF6O75095 1541 aa14.21□□□□□ -0.14
PABPC1-208ENST00000519004 SMCO2A6NFE2 343 aa14.21□□□□□ -0.14
PABPC1-208ENST00000519004 GOLGA8TH3BQL2 631 aa14.21□□□□□ -0.14
PABPC1-208ENST00000519004 CSDE1O75534 798 aaKnown RBP14.21□□□□□ -0.14
PABPC1-208ENST00000519004 IL1BP01584 269 aa14.21□□□□□ -0.14
PABPC1-208ENST00000519004 GOLGA8HP0CJ92 632 aa14.21□□□□□ -0.14
PABPC1-208ENST00000519004 PPARGP37231 505 aaPredicted RBP14.21□□□□□ -0.14
PABPC1-208ENST00000519004 CABP4P57796 275 aa14.21□□□□□ -0.14
PABPC1-208ENST00000519004 METTL21CQ5VZV1 264 aa14.21□□□□□ -0.14
PABPC1-208ENST00000519004 SPTY2D1Q68D10 685 aaPredicted RBP14.21□□□□□ -0.14
PABPC1-208ENST00000519004 AMIGO2Q86SJ2 522 aa14.21□□□□□ -0.14
PABPC1-208ENST00000519004 PRPF39Q86UA1 669 aaKnown RBP14.21□□□□□ -0.14
PABPC1-208ENST00000519004 PNMA1Q8ND90 353 aa14.21□□□□□ -0.14
PABPC1-208ENST00000519004 JADE3Q92613 823 aa14.21□□□□□ -0.14
PABPC1-208ENST00000519004 ATP6V0A1Q93050 837 aa14.21□□□□□ -0.14
PABPC1-208ENST00000519004 CNBD2Q96M20 576 aa14.21□□□□□ -0.14
PABPC1-208ENST00000519004 RAB34Q9BZG1 259 aa14.21□□□□□ -0.14
PABPC1-208ENST00000519004 Q9H521 79 aa14.21□□□□□ -0.14
PABPC1-208ENST00000519004 TBC1D23Q9NUY8 699 aa14.21□□□□□ -0.14
PABPC1-208ENST00000519004 SLC24A2Q9UI40 661 aa14.21□□□□□ -0.14
PABPC1-208ENST00000519004 RAB26Q9ULW5 256 aa14.21□□□□□ -0.14
PABPC1-208ENST00000519004 ROBO3Q96MS0 1386 aa14.2□□□□□ -0.14
PABPC1-208ENST00000519004 SOBPA7XYQ1 873 aa14.2□□□□□ -0.14
PABPC1-208ENST00000519004 RSPH10B2B2RC85 870 aa14.2□□□□□ -0.14
PABPC1-208ENST00000519004 E9PMD0 336 aa14.2□□□□□ -0.14
PABPC1-208ENST00000519004 TDP2O95551 362 aa14.2□□□□□ -0.14
PABPC1-208ENST00000519004 RSPH10BP0C881 870 aa14.2□□□□□ -0.14
PABPC1-208ENST00000519004 SRGAP2CP0DJJ0 459 aa14.2□□□□□ -0.14
PABPC1-208ENST00000519004 SRGAP2BP0DMP2 458 aa14.2□□□□□ -0.14
PABPC1-208ENST00000519004 ADSSP30520 456 aa14.2□□□□□ -0.14
PABPC1-208ENST00000519004 ALDH1A3P47895 512 aa14.2□□□□□ -0.14
PABPC1-208ENST00000519004 BCAMP50895 628 aa14.2□□□□□ -0.14
PABPC1-208ENST00000519004 CCDC142Q17RM4 750 aa14.2□□□□□ -0.14
PABPC1-208ENST00000519004 CAPN12Q6ZSI9 719 aa14.2□□□□□ -0.14
PABPC1-208ENST00000519004 BANPQ8N9N5 519 aa14.2□□□□□ -0.14
PABPC1-208ENST00000519004 SLC5A5Q92911 643 aa14.2□□□□□ -0.14
PABPC1-208ENST00000519004 TMIGD2Q96BF3 282 aa14.2□□□□□ -0.14
PABPC1-208ENST00000519004 GPATCH1Q9BRR8 931 aaKnown RBP14.2□□□□□ -0.14
PABPC1-208ENST00000519004 DRC3Q9H069 523 aa14.2□□□□□ -0.14
PABPC1-208ENST00000519004 TRNAU1APQ9NX07 287 aaKnown RBP14.2□□□□□ -0.14
PABPC1-208ENST00000519004 TMEM260Q9NX78 707 aa14.2□□□□□ -0.14
PABPC1-208ENST00000519004 AP4B1Q9Y6B7 739 aa14.2□□□□□ -0.14
PABPC1-208ENST00000519004 LAMB1P07942 1786 aa14.2□□□□□ -0.14
PABPC1-208ENST00000519004 LRP5O75197 1615 aa14.2□□□□□ -0.14
PABPC1-208ENST00000519004 A0A1B0GTW7 788 aa14.2□□□□□ -0.14
PABPC1-208ENST00000519004 ARHGAP42A6NI28 874 aa14.2□□□□□ -0.14
PABPC1-208ENST00000519004 PIK3CDO00329 1044 aa14.2□□□□□ -0.14
PABPC1-208ENST00000519004 DHRS4L1P0CG22 281 aa14.2□□□□□ -0.14
PABPC1-208ENST00000519004 BGNP21810 368 aa14.2□□□□□ -0.14
PABPC1-208ENST00000519004 EIF2B2P49770 351 aaKnown RBP14.2□□□□□ -0.14
PABPC1-208ENST00000519004 IRX4P78413 519 aa14.2□□□□□ -0.14
PABPC1-208ENST00000519004 KCNC4Q03721 635 aa14.2□□□□□ -0.14
PABPC1-208ENST00000519004 SF3B3Q15393 1217 aaKnown RBP14.2□□□□□ -0.14
PABPC1-208ENST00000519004 KNOP1Q1ED39 458 aaKnown RBP14.2□□□□□ -0.14
PABPC1-208ENST00000519004 DCAF6Q58WW2 860 aa14.2□□□□□ -0.14
PABPC1-208ENST00000519004 HP1BP3Q5SSJ5 553 aaPredicted RBP14.2□□□□□ -0.14
PABPC1-208ENST00000519004 DCLRE1AQ6PJP8 1040 aa14.2□□□□□ -0.14
PABPC1-208ENST00000519004 LPCAT2Q7L5N7 544 aa14.2□□□□□ -0.14
PABPC1-208ENST00000519004 GPBP1Q86WP2 473 aa14.2□□□□□ -0.14
PABPC1-208ENST00000519004 CHSY1Q86X52 802 aa14.2□□□□□ -0.14
PABPC1-208ENST00000519004 IQCF2Q8IXL9 164 aa14.2□□□□□ -0.14
PABPC1-208ENST00000519004 RANBP9Q96S59 729 aa14.2□□□□□ -0.14
PABPC1-208ENST00000519004 HGH1Q9BTY7 390 aa14.2□□□□□ -0.14
PABPC1-208ENST00000519004 SMYD3Q9H7B4 428 aa14.2□□□□□ -0.14
PABPC1-208ENST00000519004 KCNK4Q9NYG8 393 aa14.2□□□□□ -0.14
PABPC1-208ENST00000519004 SOX13Q9UN79 622 aa14.2□□□□□ -0.14
PABPC1-208ENST00000519004 NOX1Q9Y5S8 564 aa14.2□□□□□ -0.14
PABPC1-208ENST00000519004 MAD1L1Q9Y6D9 718 aa14.2□□□□□ -0.14
PABPC1-208ENST00000519004 A0A1B0GUL6 1792 aa14.19□□□□□ -0.14
PABPC1-208ENST00000519004 SF3B1O75533 1304 aaKnown RBP eCLIP14.19□□□□□ -0.146e-6■■■■■ 43.4
PABPC1-208ENST00000519004 MROH5Q6ZUA9 1318 aa14.19□□□□□ -0.14
PABPC1-208ENST00000519004 TSPY2A6NKD2 308 aa14.19□□□□□ -0.14
PABPC1-208ENST00000519004 K7EPI3 171 aa14.19□□□□□ -0.14
PABPC1-208ENST00000519004 SLC16A3O15427 465 aaKnown RBP14.19□□□□□ -0.14
PABPC1-208ENST00000519004 CYP2C9P11712 490 aa14.19□□□□□ -0.14
PABPC1-208ENST00000519004 ZNF12P17014 697 aa14.19□□□□□ -0.14
PABPC1-208ENST00000519004 HOXA10P31260 410 aaPredicted RBP14.19□□□□□ -0.14
PABPC1-208ENST00000519004 ARPC4P59998 168 aa14.19□□□□□ -0.14
PABPC1-208ENST00000519004 SLC25A3Q00325 362 aa14.19□□□□□ -0.14
PABPC1-208ENST00000519004 PDIA2Q13087 525 aaKnown RBP14.19□□□□□ -0.14
PABPC1-208ENST00000519004 PSMD6Q15008 389 aa14.19□□□□□ -0.14
PABPC1-208ENST00000519004 ZYXQ15942 572 aaKnown RBP14.19□□□□□ -0.14
PABPC1-208ENST00000519004 CENPSQ8N2Z9 138 aa14.19□□□□□ -0.14
PABPC1-208ENST00000519004 MZB1Q8WU39 189 aa14.19□□□□□ -0.14
PABPC1-208ENST00000519004 FOXP3Q9BZS1 431 aa14.19□□□□□ -0.14
PABPC1-208ENST00000519004 KLC2Q9H0B6 622 aa14.19□□□□□ -0.14
PABPC1-208ENST00000519004 VPS37BQ9H9H4 285 aa14.19□□□□□ -0.14
PABPC1-208ENST00000519004 ZNF287Q9HBT7 754 aa14.19□□□□□ -0.14
PABPC1-208ENST00000519004 C6orf50Q9HD87 102 aa14.19□□□□□ -0.14
PABPC1-208ENST00000519004 PRR5-ARHGAP8B1AHC4 643 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms