RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 NR4A1P22736 598 aa5.46□□□□□ -1.54
SQLE-202ENST00000518604 LOXL3P58215 753 aa5.46□□□□□ -1.54
SQLE-202ENST00000518604 HTRA4P83105 476 aaPredicted RBP5.46□□□□□ -1.54
SQLE-202ENST00000518604 TUBA3CQ13748 450 aa5.46□□□□□ -1.54
SQLE-202ENST00000518604 MGAT5BQ3V5L5 792 aa5.46□□□□□ -1.54
SQLE-202ENST00000518604 DGKKQ5KSL6 1271 aa5.46□□□□□ -1.54
SQLE-202ENST00000518604 DCAF12L1Q5VU92 463 aa5.46□□□□□ -1.54
SQLE-202ENST00000518604 IZUMO3Q5VZ72 239 aa5.46□□□□□ -1.54
SQLE-202ENST00000518604 TUBA3EQ6PEY2 450 aa5.46□□□□□ -1.54
SQLE-202ENST00000518604 RHOUQ7L0Q8 258 aa5.46□□□□□ -1.54
SQLE-202ENST00000518604 ARHGEF19Q8IW93 802 aa5.46□□□□□ -1.54
SQLE-202ENST00000518604 YAF2Q8IY57 180 aa5.46□□□□□ -1.54
SQLE-202ENST00000518604 OR2C3Q8N628 320 aa5.46□□□□□ -1.54
SQLE-202ENST00000518604 RNF152Q8N8N0 203 aa5.46□□□□□ -1.54
SQLE-202ENST00000518604 SNX19Q92543 992 aa5.46□□□□□ -1.54
SQLE-202ENST00000518604 NACC2Q96BF6 587 aa5.46□□□□□ -1.54
SQLE-202ENST00000518604 SNX22Q96L94 193 aa5.46□□□□□ -1.54
SQLE-202ENST00000518604 SGCZQ96LD1 299 aa5.46□□□□□ -1.54
SQLE-202ENST00000518604 RIPOR3Q96MK2 946 aa5.46□□□□□ -1.54
SQLE-202ENST00000518604 OSBPL9Q96SU4 736 aa5.46□□□□□ -1.54
SQLE-202ENST00000518604 DHX36Q9H2U1 1008 aaKnown RBP5.46□□□□□ -1.54
SQLE-202ENST00000518604 INTS13Q9NVM9 706 aa5.46□□□□□ -1.54
SQLE-202ENST00000518604 MRPS18AQ9NVS2 196 aaKnown RBP5.46□□□□□ -1.54
SQLE-202ENST00000518604 LOC102723971A0A1B0GUV8 181 aa5.45□□□□□ -1.54
SQLE-202ENST00000518604 F8W8V4 182 aa5.45□□□□□ -1.54
SQLE-202ENST00000518604 AREL1O15033 823 aa5.45□□□□□ -1.54
SQLE-202ENST00000518604 DCLK1O15075 740 aa5.45□□□□□ -1.54
SQLE-202ENST00000518604 CCP110O43303 1012 aa5.45□□□□□ -1.54
SQLE-202ENST00000518604 THAP12O43422 761 aa5.45□□□□□ -1.54
SQLE-202ENST00000518604 FGF18O76093 207 aa5.45□□□□□ -1.54
SQLE-202ENST00000518604 TXNP10599 105 aaKnown RBP5.45□□□□□ -1.54
SQLE-202ENST00000518604 TNFSF4P23510 183 aa5.45□□□□□ -1.54
SQLE-202ENST00000518604 ZFP36P26651 326 aaKnown RBP5.45□□□□□ -1.54
SQLE-202ENST00000518604 NPTX2P47972 431 aa5.45□□□□□ -1.54
SQLE-202ENST00000518604 PXNP49023 591 aaPredicted RBP5.45□□□□□ -1.54
SQLE-202ENST00000518604 NDUFV1P49821 464 aa5.45□□□□□ -1.54
SQLE-202ENST00000518604 BLOC1S1P78537 153 aa5.45□□□□□ -1.54
SQLE-202ENST00000518604 GUCY1B3Q02153 619 aa5.45□□□□□ -1.54
SQLE-202ENST00000518604 BOP1Q14137 746 aaKnown RBP5.45□□□□□ -1.54
SQLE-202ENST00000518604 INSCQ1MX18 579 aa5.45□□□□□ -1.54
SQLE-202ENST00000518604 PREPLQ4J6C6 727 aaPredicted RBP5.45□□□□□ -1.54
SQLE-202ENST00000518604 FAM209BQ5JX69 171 aa5.45□□□□□ -1.54
SQLE-202ENST00000518604 KRTAP5-3Q6L8H2 238 aa5.45□□□□□ -1.54
SQLE-202ENST00000518604 RNF44Q7L0R7 432 aa5.45□□□□□ -1.54
SQLE-202ENST00000518604 BEND5Q7L4P6 421 aa5.45□□□□□ -1.54
SQLE-202ENST00000518604 ADGRG5Q8IZF4 528 aa5.45□□□□□ -1.54
SQLE-202ENST00000518604 OR56A3Q8NH54 315 aa5.45□□□□□ -1.54
SQLE-202ENST00000518604 SH3RF3Q8TEJ3 882 aaPredicted RBP5.45□□□□□ -1.54
SQLE-202ENST00000518604 IQCDQ96DY2 449 aa5.45□□□□□ -1.54
SQLE-202ENST00000518604 PPP1R9BQ96SB3 815 aa5.45□□□□□ -1.54
SQLE-202ENST00000518604 ADAM2Q99965 735 aa5.45□□□□□ -1.54
SQLE-202ENST00000518604 PTDSS2Q9BVG9 487 aa5.45□□□□□ -1.54
SQLE-202ENST00000518604 SELENOOQ9BVL4 669 aa5.45□□□□□ -1.54
SQLE-202ENST00000518604 EIF2AQ9BY44 585 aaKnown RBP5.45□□□□□ -1.54
SQLE-202ENST00000518604 TTYH3Q9C0H2 523 aa5.45□□□□□ -1.54
SQLE-202ENST00000518604 CHST8Q9H2A9 424 aa5.45□□□□□ -1.54
SQLE-202ENST00000518604 UNKLQ9H9P5 680 aaKnown RBP5.45□□□□□ -1.54
SQLE-202ENST00000518604 MAP3K2Q9Y2U5 619 aa5.45□□□□□ -1.54
SQLE-202ENST00000518604 TRGV11A0A075B6L2 103 aa5.44□□□□□ -1.54
SQLE-202ENST00000518604 A0A0B4J269 797 aa5.44□□□□□ -1.54
SQLE-202ENST00000518604 A0A1W2PPC4 97 aa5.44□□□□□ -1.54
SQLE-202ENST00000518604 CLCA1A8K7I4 914 aa5.44□□□□□ -1.54
SQLE-202ENST00000518604 F5H697 171 aa5.44□□□□□ -1.54
SQLE-202ENST00000518604 APOL1O14791 398 aa5.44□□□□□ -1.54
SQLE-202ENST00000518604 SETSIPP0DME0 302 aa5.44□□□□□ -1.54
SQLE-202ENST00000518604 PPIFP30405 207 aaKnown RBP5.44□□□□□ -1.54
SQLE-202ENST00000518604 TUBB3Q13509 450 aa5.44□□□□□ -1.54
SQLE-202ENST00000518604 GEN1Q17RS7 908 aa5.44□□□□□ -1.54
SQLE-202ENST00000518604 PLA1AQ53H76 456 aa5.44□□□□□ -1.54
SQLE-202ENST00000518604 CATSPERGQ6ZRH7 1159 aa5.44□□□□□ -1.54
SQLE-202ENST00000518604 UNC13DQ70J99 1090 aa5.44□□□□□ -1.54
SQLE-202ENST00000518604 FAM9AQ8IZU1 332 aaPredicted RBP5.44□□□□□ -1.54
SQLE-202ENST00000518604 CCDC33Q8N5R6 958 aa5.44□□□□□ -1.54
SQLE-202ENST00000518604 SMCR8Q8TEV9 937 aaPredicted RBP5.44□□□□□ -1.54
SQLE-202ENST00000518604 PMM1Q92871 262 aa5.44□□□□□ -1.54
SQLE-202ENST00000518604 TBCCD1Q9NVR7 557 aa5.44□□□□□ -1.54
SQLE-202ENST00000518604 GPRC5BQ9NZH0 403 aa5.44□□□□□ -1.54
SQLE-202ENST00000518604 MYO1AQ9UBC5 1043 aa5.44□□□□□ -1.54
SQLE-202ENST00000518604 HS3ST4Q9Y661 456 aa5.44□□□□□ -1.54
SQLE-202ENST00000518604 TMEM233B4DJY2 109 aa5.43□□□□□ -1.54
SQLE-202ENST00000518604 B8ZZF3 427 aa5.43□□□□□ -1.54
SQLE-202ENST00000518604 RASSF9O75901 435 aa5.43□□□□□ -1.54
SQLE-202ENST00000518604 ZFPL1O95159 310 aa5.43□□□□□ -1.54
SQLE-202ENST00000518604 SPDEFO95238 335 aa5.43□□□□□ -1.54
SQLE-202ENST00000518604 SRGNP10124 158 aa5.43□□□□□ -1.54
SQLE-202ENST00000518604 IL1R1P14778 569 aa5.43□□□□□ -1.54
SQLE-202ENST00000518604 IL1R2P27930 398 aa5.43□□□□□ -1.54
SQLE-202ENST00000518604 CARSP49589 748 aaKnown RBP5.43□□□□□ -1.54
SQLE-202ENST00000518604 ZNF134P52741 427 aa5.43□□□□□ -1.54
SQLE-202ENST00000518604 MC2RQ01718 297 aa5.43□□□□□ -1.54
SQLE-202ENST00000518604 SLC29A2Q14542 456 aa5.43□□□□□ -1.54
SQLE-202ENST00000518604 LSM12Q3MHD2 195 aaKnown RBP5.43□□□□□ -1.54
SQLE-202ENST00000518604 CD300EQ496F6 205 aaPredicted RBP5.43□□□□□ -1.54
SQLE-202ENST00000518604 LY6G5CQ5SRR4 150 aa5.43□□□□□ -1.54
SQLE-202ENST00000518604 ABHD17BQ5VST6 288 aa5.43□□□□□ -1.54
SQLE-202ENST00000518604 TMEM108Q6UXF1 575 aa5.43□□□□□ -1.54
SQLE-202ENST00000518604 SPICE1Q8N0Z3 855 aa5.43□□□□□ -1.54
SQLE-202ENST00000518604 FAM109AQ8N4B1 249 aa5.43□□□□□ -1.54
SQLE-202ENST00000518604 TMEM125Q96AQ2 219 aa5.43□□□□□ -1.54
SQLE-202ENST00000518604 STK31Q9BXU1 1019 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms