RNA–Protein interactions for RNA: ENST00000517667.5

TRAPPC9-203, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 518 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-203ENST00000517667 KCND2Q9NZV8 630 aa12.4□□□□□ -0.42
TRAPPC9-203ENST00000517667 NOL7Q9UMY1 257 aaKnown RBP12.4□□□□□ -0.42
TRAPPC9-203ENST00000517667 LHX6Q9UPM6 363 aa12.4□□□□□ -0.42
TRAPPC9-203ENST00000517667 TNRC6BQ9UPQ9 1833 aaKnown RBP12.39□□□□□ -0.43
TRAPPC9-203ENST00000517667 HELZP42694 1942 aaKnown RBP12.39□□□□□ -0.43
TRAPPC9-203ENST00000517667 DMXL2Q8TDJ6 3036 aa12.39□□□□□ -0.43
TRAPPC9-203ENST00000517667 SFI1A8K8P3 1242 aa12.39□□□□□ -0.43
TRAPPC9-203ENST00000517667 LACTBL1A8MY62 500 aa12.39□□□□□ -0.43
TRAPPC9-203ENST00000517667 LAD1O00515 517 aa12.39□□□□□ -0.43
TRAPPC9-203ENST00000517667 CDX4O14627 284 aaPredicted RBP12.39□□□□□ -0.43
TRAPPC9-203ENST00000517667 HNRNPDLO14979 420 aaKnown RBP12.39□□□□□ -0.43
TRAPPC9-203ENST00000517667 F11P03951 625 aa12.39□□□□□ -0.43
TRAPPC9-203ENST00000517667 ADRB2P07550 413 aa12.39□□□□□ -0.43
TRAPPC9-203ENST00000517667 ARSAP15289 507 aa12.39□□□□□ -0.43
TRAPPC9-203ENST00000517667 NMT1P30419 496 aaKnown RBP12.39□□□□□ -0.43
TRAPPC9-203ENST00000517667 TNFSF9P41273 254 aa12.39□□□□□ -0.43
TRAPPC9-203ENST00000517667 PSMD2Q13200 908 aa12.39□□□□□ -0.43
TRAPPC9-203ENST00000517667 MTF1Q14872 753 aa12.39□□□□□ -0.43
TRAPPC9-203ENST00000517667 ENOX2Q16206 610 aaKnown RBP12.39□□□□□ -0.43
TRAPPC9-203ENST00000517667 TMEM150AQ86TG1 271 aa12.39□□□□□ -0.43
TRAPPC9-203ENST00000517667 MON1AQ86VX9 555 aa12.39□□□□□ -0.43
TRAPPC9-203ENST00000517667 TMEM130Q8N3G9 435 aa12.39□□□□□ -0.43
TRAPPC9-203ENST00000517667 KCTD17Q8N5Z5 321 aa12.39□□□□□ -0.43
TRAPPC9-203ENST00000517667 C4orf32Q8N8J7 132 aa12.39□□□□□ -0.43
TRAPPC9-203ENST00000517667 GIPC2Q8TF65 315 aa12.39□□□□□ -0.43
TRAPPC9-203ENST00000517667 OSCP1Q8WVF1 389 aa12.39□□□□□ -0.43
TRAPPC9-203ENST00000517667 C8orf76Q96K31 380 aa12.39□□□□□ -0.43
TRAPPC9-203ENST00000517667 ECT2Q9H8V3 914 aa12.39□□□□□ -0.43
TRAPPC9-203ENST00000517667 RPF1Q9H9Y2 349 aaKnown RBP12.39□□□□□ -0.43
TRAPPC9-203ENST00000517667 POLR3BQ9NW08 1133 aaPredicted RBP12.39□□□□□ -0.43
TRAPPC9-203ENST00000517667 LARSQ9P2J5 1176 aaKnown RBP12.39□□□□□ -0.43
TRAPPC9-203ENST00000517667 UXTQ9UBK9 157 aaPredicted RBP12.39□□□□□ -0.43
TRAPPC9-203ENST00000517667 EVLQ9UI08 416 aaPredicted RBP12.39□□□□□ -0.43
TRAPPC9-203ENST00000517667 LAMA5O15230 3695 aa12.38□□□□□ -0.43
TRAPPC9-203ENST00000517667 PIRO00625 290 aa12.38□□□□□ -0.43
TRAPPC9-203ENST00000517667 PPEF2O14830 753 aa12.38□□□□□ -0.43
TRAPPC9-203ENST00000517667 OGTO15294 1046 aa12.38□□□□□ -0.43
TRAPPC9-203ENST00000517667 CSH1P0DML2 217 aa12.38□□□□□ -0.43
TRAPPC9-203ENST00000517667 CSH2P0DML3 217 aa12.38□□□□□ -0.43
TRAPPC9-203ENST00000517667 HAPLN1P10915 354 aaPredicted RBP12.38□□□□□ -0.43
TRAPPC9-203ENST00000517667 HMGA1P17096 107 aaKnown RBP12.38□□□□□ -0.43
TRAPPC9-203ENST00000517667 DPP6P42658 865 aa12.38□□□□□ -0.43
TRAPPC9-203ENST00000517667 LIG4P49917 911 aa12.38□□□□□ -0.43
TRAPPC9-203ENST00000517667 GUCY2FP51841 1108 aa12.38□□□□□ -0.43
TRAPPC9-203ENST00000517667 GUCY1B3Q02153 619 aa12.38□□□□□ -0.43
TRAPPC9-203ENST00000517667 FAM160A1Q05DH4 1040 aa12.38□□□□□ -0.43
TRAPPC9-203ENST00000517667 RING1Q06587 406 aa12.38□□□□□ -0.43
TRAPPC9-203ENST00000517667 NR1H3Q13133 447 aa12.38□□□□□ -0.43
TRAPPC9-203ENST00000517667 UAP1L1Q3KQV9 507 aa12.38□□□□□ -0.43
TRAPPC9-203ENST00000517667 C9orf57Q5W0N0 161 aa12.38□□□□□ -0.43
TRAPPC9-203ENST00000517667 TXNDC8Q6A555 127 aa12.38□□□□□ -0.43
TRAPPC9-203ENST00000517667 RASSF3Q86WH2 238 aa12.38□□□□□ -0.43
TRAPPC9-203ENST00000517667 DCP1BQ8IZD4 617 aaKnown RBP12.38□□□□□ -0.43
TRAPPC9-203ENST00000517667 DEFB124Q8NES8 71 aa12.38□□□□□ -0.43
TRAPPC9-203ENST00000517667 KCNN1Q92952 543 aa12.38□□□□□ -0.43
TRAPPC9-203ENST00000517667 CNOT6LQ96LI5 555 aaKnown RBP12.38□□□□□ -0.43
TRAPPC9-203ENST00000517667 NUSAP1Q9BXS6 441 aaKnown RBP12.38□□□□□ -0.43
TRAPPC9-203ENST00000517667 HAPLN2Q9GZV7 340 aa12.38□□□□□ -0.43
TRAPPC9-203ENST00000517667 DUS2Q9NX74 493 aaKnown RBP12.38□□□□□ -0.43
TRAPPC9-203ENST00000517667 ABI2Q9NYB9 513 aaPredicted RBP12.38□□□□□ -0.43
TRAPPC9-203ENST00000517667 DERAQ9Y315 318 aa12.38□□□□□ -0.43
TRAPPC9-203ENST00000517667 MSRB2Q9Y3D2 182 aa12.38□□□□□ -0.43
TRAPPC9-203ENST00000517667 GCN1Q92616 2671 aaKnown RBP12.38□□□□□ -0.43
TRAPPC9-203ENST00000517667 PTPRDP23468 1912 aa12.37□□□□□ -0.43
TRAPPC9-203ENST00000517667 PLXND1Q9Y4D7 1925 aa12.37□□□□□ -0.43
TRAPPC9-203ENST00000517667 SCN1AP35498 2009 aa12.37□□□□□ -0.43
TRAPPC9-203ENST00000517667 ABCA7Q8IZY2 2146 aa12.37□□□□□ -0.43
TRAPPC9-203ENST00000517667 ANO9A1A5B4 782 aa12.37□□□□□ -0.43
TRAPPC9-203ENST00000517667 PATE3B3GLJ2 98 aa12.37□□□□□ -0.43
TRAPPC9-203ENST00000517667 FAM189A1O60320 539 aa12.37□□□□□ -0.43
TRAPPC9-203ENST00000517667 TOP3BO95985 862 aaKnown RBP12.37□□□□□ -0.43
TRAPPC9-203ENST00000517667 U2AF2P26368 475 aaKnown RBP eCLIP12.37□□□□□ -0.43
TRAPPC9-203ENST00000517667 RDXP35241 583 aaKnown RBP12.37□□□□□ -0.43
TRAPPC9-203ENST00000517667 IFNAR2P48551 515 aa12.37□□□□□ -0.43
TRAPPC9-203ENST00000517667 DHPSP49366 369 aaPredicted RBP12.37□□□□□ -0.43
TRAPPC9-203ENST00000517667 TAF6P49848 677 aa12.37□□□□□ -0.43
TRAPPC9-203ENST00000517667 NCKAP1LP55160 1127 aa12.37□□□□□ -0.43
TRAPPC9-203ENST00000517667 IRX4P78413 519 aa12.37□□□□□ -0.43
TRAPPC9-203ENST00000517667 RAD51AP2Q09MP3 1159 aa12.37□□□□□ -0.43
TRAPPC9-203ENST00000517667 TMEM132DQ14C87 1099 aa12.37□□□□□ -0.43
TRAPPC9-203ENST00000517667 LMBRD2Q68DH5 695 aaPredicted RBP12.37□□□□□ -0.43
TRAPPC9-203ENST00000517667 JADE1Q6IE81 842 aa12.37□□□□□ -0.43
TRAPPC9-203ENST00000517667 EZH1Q92800 747 aaPredicted RBP12.37□□□□□ -0.43
TRAPPC9-203ENST00000517667 TPSD1Q9BZJ3 242 aa12.37□□□□□ -0.43
TRAPPC9-203ENST00000517667 TMEM206Q9H813 350 aa12.37□□□□□ -0.43
TRAPPC9-203ENST00000517667 PCDHB5Q9Y5E4 795 aa12.37□□□□□ -0.43
TRAPPC9-203ENST00000517667 ASCC3Q8N3C0 2202 aaKnown RBP12.36□□□□□ -0.43
TRAPPC9-203ENST00000517667 TRAV19A0A0A6YYK7 116 aa12.36□□□□□ -0.43
TRAPPC9-203ENST00000517667 PP2D1A8MPX8 630 aa12.36□□□□□ -0.43
TRAPPC9-203ENST00000517667 H0Y626 953 aa12.36□□□□□ -0.43
TRAPPC9-203ENST00000517667 CYB561D2O14569 222 aa12.36□□□□□ -0.43
TRAPPC9-203ENST00000517667 HYAL3O43820 417 aaPredicted RBP12.36□□□□□ -0.43
TRAPPC9-203ENST00000517667 ALDH1A2O94788 518 aa12.36□□□□□ -0.43
TRAPPC9-203ENST00000517667 TRIM16O95361 564 aa12.36□□□□□ -0.43
TRAPPC9-203ENST00000517667 PIGRP01833 764 aa12.36□□□□□ -0.43
TRAPPC9-203ENST00000517667 CKMP06732 381 aa12.36□□□□□ -0.43
TRAPPC9-203ENST00000517667 USP17L7P0C7H9 530 aa12.36□□□□□ -0.43
TRAPPC9-203ENST00000517667 CDC25AP30304 524 aa12.36□□□□□ -0.43
TRAPPC9-203ENST00000517667 ABCD1P33897 745 aa12.36□□□□□ -0.43
TRAPPC9-203ENST00000517667 PRPHP41219 470 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms