RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 GRIN1Q05586 938 aa3.62□□□□□ -1.83
SCARNA13-201ENST00000516672 GRIK3Q13003 919 aa3.62□□□□□ -1.83
SCARNA13-201ENST00000516672 PPFIA1Q13136 1202 aa3.62□□□□□ -1.83
SCARNA13-201ENST00000516672 AAMPQ13685 434 aa3.62□□□□□ -1.83
SCARNA13-201ENST00000516672 DHX8Q14562 1220 aaKnown RBP3.62□□□□□ -1.83
SCARNA13-201ENST00000516672 KCNT1Q5JUK3 1230 aa3.62□□□□□ -1.83
SCARNA13-201ENST00000516672 DCAF10Q5QP82 559 aa3.62□□□□□ -1.83
SCARNA13-201ENST00000516672 PRAMEF14Q5SWL7 426 aa3.62□□□□□ -1.83
SCARNA13-201ENST00000516672 ODR4Q5SWX8 454 aa3.62□□□□□ -1.83
SCARNA13-201ENST00000516672 CELF3Q5SZQ8 465 aaKnown RBP3.62□□□□□ -1.83
SCARNA13-201ENST00000516672 MARCH8Q5T0T0 291 aa3.62□□□□□ -1.83
SCARNA13-201ENST00000516672 DCAF12L1Q5VU92 463 aa3.62□□□□□ -1.83
SCARNA13-201ENST00000516672 ZKSCAN2Q63HK3 967 aa3.62□□□□□ -1.83
SCARNA13-201ENST00000516672 LAYNQ6UX15 382 aa3.62□□□□□ -1.83
SCARNA13-201ENST00000516672 CAPN12Q6ZSI9 719 aa3.62□□□□□ -1.83
SCARNA13-201ENST00000516672 GAREM2Q75VX8 874 aa3.62□□□□□ -1.83
SCARNA13-201ENST00000516672 ZNF598Q86UK7 904 aaKnown RBP3.62□□□□□ -1.83
SCARNA13-201ENST00000516672 SKAP1Q86WV1 359 aa3.62□□□□□ -1.83
SCARNA13-201ENST00000516672 ZFAND4Q86XD8 727 aa3.62□□□□□ -1.83
SCARNA13-201ENST00000516672 RPAP2Q8IXW5 612 aaPredicted RBP3.62□□□□□ -1.83
SCARNA13-201ENST00000516672 ALLCQ8N6M5 410 aa3.62□□□□□ -1.83
SCARNA13-201ENST00000516672 LRRC17Q8N6Y2 441 aa3.62□□□□□ -1.83
SCARNA13-201ENST00000516672 CCDC26Q8TAB7 109 aa3.62□□□□□ -1.83
SCARNA13-201ENST00000516672 CD101Q93033 1021 aa3.62□□□□□ -1.83
SCARNA13-201ENST00000516672 EXOC4Q96A65 974 aa3.62□□□□□ -1.83
SCARNA13-201ENST00000516672 ERLEC1Q96DZ1 483 aa3.62□□□□□ -1.83
SCARNA13-201ENST00000516672 SUCLG2Q96I99 432 aa3.62□□□□□ -1.83
SCARNA13-201ENST00000516672 CCDC17Q96LX7 622 aa3.62□□□□□ -1.83
SCARNA13-201ENST00000516672 IPO9Q96P70 1041 aaKnown RBP3.62□□□□□ -1.83
SCARNA13-201ENST00000516672 SLITRK6Q9H5Y7 841 aa3.62□□□□□ -1.83
SCARNA13-201ENST00000516672 CD93Q9NPY3 652 aa3.62□□□□□ -1.83
SCARNA13-201ENST00000516672 HPS4Q9NQG7 708 aa3.62□□□□□ -1.83
SCARNA13-201ENST00000516672 CHST7Q9NS84 486 aa3.62□□□□□ -1.83
SCARNA13-201ENST00000516672 MARCH5Q9NX47 278 aa3.62□□□□□ -1.83
SCARNA13-201ENST00000516672 LRP2BPQ9P2M1 347 aa3.62□□□□□ -1.83
SCARNA13-201ENST00000516672 SWAP70Q9UH65 585 aa3.62□□□□□ -1.83
SCARNA13-201ENST00000516672 EIF2B4Q9UI10 523 aaKnown RBP3.62□□□□□ -1.83
SCARNA13-201ENST00000516672 CCPG1Q9ULG6 757 aa3.62□□□□□ -1.83
SCARNA13-201ENST00000516672 NOB1Q9ULX3 412 aaKnown RBP3.62□□□□□ -1.83
SCARNA13-201ENST00000516672 OSGIN2Q9Y236 505 aa3.62□□□□□ -1.83
SCARNA13-201ENST00000516672 INPP5FQ9Y2H2 1132 aa3.62□□□□□ -1.83
SCARNA13-201ENST00000516672 SLCO1B1Q9Y6L6 691 aa3.62□□□□□ -1.83
SCARNA13-201ENST00000516672 WDR19Q8NEZ3 1342 aa3.62□□□□□ -1.83
SCARNA13-201ENST00000516672 TLCD2A6NGC4 264 aa3.61□□□□□ -1.83
SCARNA13-201ENST00000516672 K7EQS6 105 aa3.61□□□□□ -1.83
SCARNA13-201ENST00000516672 AGRPO00253 132 aa3.61□□□□□ -1.83
SCARNA13-201ENST00000516672 LZTS3O60299 673 aaPredicted RBP3.61□□□□□ -1.83
SCARNA13-201ENST00000516672 ZNF217O75362 1048 aa3.61□□□□□ -1.83
SCARNA13-201ENST00000516672 DDHD2O94830 711 aa3.61□□□□□ -1.83
SCARNA13-201ENST00000516672 KLF8O95600 359 aaPredicted RBP3.61□□□□□ -1.83
SCARNA13-201ENST00000516672 EFEMP2O95967 443 aa3.61□□□□□ -1.83
SCARNA13-201ENST00000516672 PRKAR1AP10644 381 aa3.61□□□□□ -1.83
SCARNA13-201ENST00000516672 NCAM1P13591 858 aa3.61□□□□□ -1.83
SCARNA13-201ENST00000516672 GABRG2P18507 467 aa3.61□□□□□ -1.83
SCARNA13-201ENST00000516672 DNASE1P24855 282 aa3.61□□□□□ -1.83
SCARNA13-201ENST00000516672 HOXC12P31275 282 aa3.61□□□□□ -1.83
SCARNA13-201ENST00000516672 CTSKP43235 329 aa3.61□□□□□ -1.83
SCARNA13-201ENST00000516672 CHRNA4P43681 627 aa3.61□□□□□ -1.83
SCARNA13-201ENST00000516672 RABIFP47224 123 aa3.61□□□□□ -1.83
SCARNA13-201ENST00000516672 ARSDP51689 593 aa3.61□□□□□ -1.83
SCARNA13-201ENST00000516672 RPS6P62753 249 aaKnown RBP3.61□□□□□ -1.83
SCARNA13-201ENST00000516672 IGBP1P78318 339 aa3.61□□□□□ -1.83
SCARNA13-201ENST00000516672 CREMQ03060 361 aa3.61□□□□□ -1.83
SCARNA13-201ENST00000516672 COL10A1Q03692 680 aa3.61□□□□□ -1.83
SCARNA13-201ENST00000516672 CDK18Q07002 472 aa3.61□□□□□ -1.83
SCARNA13-201ENST00000516672 DMTNQ08495 405 aa3.61□□□□□ -1.83
SCARNA13-201ENST00000516672 TEAD4Q15561 434 aa3.61□□□□□ -1.83
SCARNA13-201ENST00000516672 TEAD2Q15562 447 aa3.61□□□□□ -1.83
SCARNA13-201ENST00000516672 DEFB109BQ30KR1 87 aa3.61□□□□□ -1.83
SCARNA13-201ENST00000516672 RABL6Q3YEC7 729 aaPredicted RBP3.61□□□□□ -1.83
SCARNA13-201ENST00000516672 NOMO2Q5JPE7 1267 aa3.61□□□□□ -1.83
SCARNA13-201ENST00000516672 TRIM68Q6AZZ1 485 aa3.61□□□□□ -1.83
SCARNA13-201ENST00000516672 PRSS55Q6UWB4 352 aaPredicted RBP3.61□□□□□ -1.83
SCARNA13-201ENST00000516672 RNF207Q6ZRF8 634 aa3.61□□□□□ -1.83
SCARNA13-201ENST00000516672 ZNF438Q7Z4V0 828 aa3.61□□□□□ -1.83
SCARNA13-201ENST00000516672 FAM228AQ86W67 206 aa3.61□□□□□ -1.83
SCARNA13-201ENST00000516672 AHI1Q8N157 1196 aa3.61□□□□□ -1.83
SCARNA13-201ENST00000516672 ACRBPQ8NEB7 543 aa3.61□□□□□ -1.83
SCARNA13-201ENST00000516672 C1orf216Q8TAB5 229 aa3.61□□□□□ -1.83
SCARNA13-201ENST00000516672 PRCCQ92733 491 aaPredicted RBP3.61□□□□□ -1.83
SCARNA13-201ENST00000516672 NACC2Q96BF6 587 aa3.61□□□□□ -1.83
SCARNA13-201ENST00000516672 DYNLL2Q96FJ2 89 aa3.61□□□□□ -1.83
SCARNA13-201ENST00000516672 DDX27Q96GQ7 796 aaKnown RBP3.61□□□□□ -1.83
SCARNA13-201ENST00000516672 SPOCK3Q9BQ16 436 aa3.61□□□□□ -1.83
SCARNA13-201ENST00000516672 POLR3CQ9BUI4 534 aaPredicted RBP3.61□□□□□ -1.83
SCARNA13-201ENST00000516672 GNL3Q9BVP2 549 aaKnown RBP eCLIP3.61□□□□□ -1.83
SCARNA13-201ENST00000516672 SRRTQ9BXP5 876 aaKnown RBP3.61□□□□□ -1.83
SCARNA13-201ENST00000516672 USP44Q9H0E7 712 aa3.61□□□□□ -1.83
SCARNA13-201ENST00000516672 LIME1Q9H400 295 aa3.61□□□□□ -1.83
SCARNA13-201ENST00000516672 EBF3Q9H4W6 596 aa3.61□□□□□ -1.83
SCARNA13-201ENST00000516672 GKN1Q9NS71 199 aa3.61□□□□□ -1.83
SCARNA13-201ENST00000516672 C9orf78Q9NZ63 289 aaPredicted RBP3.61□□□□□ -1.83
SCARNA13-201ENST00000516672 RCAN3Q9UKA8 241 aa3.61□□□□□ -1.83
SCARNA13-201ENST00000516672 CDC42EP3Q9UKI2 254 aa3.61□□□□□ -1.83
SCARNA13-201ENST00000516672 ZNF215Q9UL58 517 aaPredicted RBP3.61□□□□□ -1.83
SCARNA13-201ENST00000516672 PLEKHA6Q9Y2H5 1048 aa3.61□□□□□ -1.83
SCARNA13-201ENST00000516672 PRG3Q9Y2Y8 225 aaPredicted RBP3.61□□□□□ -1.83
SCARNA13-201ENST00000516672 PCDHGC4Q9Y5F7 938 aa3.61□□□□□ -1.83
SCARNA13-201ENST00000516672 POLEQ07864 2286 aa3.61□□□□□ -1.83
SCARNA13-201ENST00000516672 DOCK9Q9BZ29 2069 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms