RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 CISHQ9NSE2 258 aa12.7□□□□□ -0.38
SNF8-215ENST00000515572 GTF3C4Q9UKN8 822 aa12.7□□□□□ -0.38
SNF8-215ENST00000515572 PCDHB5Q9Y5E4 795 aa12.7□□□□□ -0.38
SNF8-215ENST00000515572 C2orf16Q68DN1 1984 aa12.7□□□□□ -0.38
SNF8-215ENST00000515572 BRWD1Q9NSI6 2320 aa12.7□□□□□ -0.38
SNF8-215ENST00000515572 CCDC195A0A1B0GUA6 201 aa12.69□□□□□ -0.38
SNF8-215ENST00000515572 LGALS16A8MUM7 142 aa12.69□□□□□ -0.38
SNF8-215ENST00000515572 H3BQ06 376 aaPredicted RBP12.69□□□□□ -0.38
SNF8-215ENST00000515572 CILPO75339 1184 aa12.69□□□□□ -0.38
SNF8-215ENST00000515572 POU2F2P09086 479 aa12.69□□□□□ -0.38
SNF8-215ENST00000515572 PTPN1P18031 435 aaKnown RBP12.69□□□□□ -0.38
SNF8-215ENST00000515572 CD58P19256 250 aa12.69□□□□□ -0.38
SNF8-215ENST00000515572 PON1P27169 355 aa12.69□□□□□ -0.38
SNF8-215ENST00000515572 TUFMP49411 452 aaKnown RBP12.69□□□□□ -0.38
SNF8-215ENST00000515572 LRMPQ12912 555 aa12.69□□□□□ -0.38
SNF8-215ENST00000515572 PLD1Q13393 1074 aa12.69□□□□□ -0.38
SNF8-215ENST00000515572 SMAD4Q13485 552 aaKnown RBP12.69□□□□□ -0.38
SNF8-215ENST00000515572 CFAP221Q4G0U5 840 aa12.69□□□□□ -0.38
SNF8-215ENST00000515572 LUZP1Q86V48 1076 aa12.69□□□□□ -0.38
SNF8-215ENST00000515572 CRYBG2Q8N1P7 616 aa12.69□□□□□ -0.38
SNF8-215ENST00000515572 PPM1KQ8N3J5 372 aa12.69□□□□□ -0.38
SNF8-215ENST00000515572 B3GALNT2Q8NCR0 500 aa12.69□□□□□ -0.38
SNF8-215ENST00000515572 MYCBPAPQ8TBZ2 947 aa12.69□□□□□ -0.38
SNF8-215ENST00000515572 ATXN2LQ8WWM7 1075 aaKnown RBP12.69□□□□□ -0.38
SNF8-215ENST00000515572 ARID3AQ99856 593 aa12.69□□□□□ -0.38
SNF8-215ENST00000515572 CRACR2AQ9BSW2 395 aa12.69□□□□□ -0.38
SNF8-215ENST00000515572 NT5C1AQ9BXI3 368 aa12.69□□□□□ -0.38
SNF8-215ENST00000515572 PRKD2Q9BZL6 878 aa12.69□□□□□ -0.38
SNF8-215ENST00000515572 S1PR5Q9H228 398 aa12.69□□□□□ -0.38
SNF8-215ENST00000515572 VPS16Q9H269 839 aa12.69□□□□□ -0.38
SNF8-215ENST00000515572 FAM50BQ9Y247 325 aa12.69□□□□□ -0.38
SNF8-215ENST00000515572 NME7Q9Y5B8 376 aa12.69□□□□□ -0.38
SNF8-215ENST00000515572 INSL5Q9Y5Q6 135 aa12.69□□□□□ -0.38
SNF8-215ENST00000515572 MYBPHLA2RUH7 354 aa12.68□□□□□ -0.38
SNF8-215ENST00000515572 HCRTO43612 131 aa12.68□□□□□ -0.38
SNF8-215ENST00000515572 ATP2C2O75185 946 aa12.68□□□□□ -0.38
SNF8-215ENST00000515572 XYLBO75191 536 aa12.68□□□□□ -0.38
SNF8-215ENST00000515572 SEC24AO95486 1093 aa12.68□□□□□ -0.38
SNF8-215ENST00000515572 VNN2O95498 520 aa12.68□□□□□ -0.38
SNF8-215ENST00000515572 LRG1P02750 347 aa12.68□□□□□ -0.38
SNF8-215ENST00000515572 ATP1A3P13637 1013 aa12.68□□□□□ -0.38
SNF8-215ENST00000515572 SLC9A1P19634 815 aa12.68□□□□□ -0.38
SNF8-215ENST00000515572 RFX1P22670 979 aa12.68□□□□□ -0.38
SNF8-215ENST00000515572 MFAP3P55082 362 aa12.68□□□□□ -0.38
SNF8-215ENST00000515572 PSMC1P62191 440 aaKnown RBP12.68□□□□□ -0.38
SNF8-215ENST00000515572 DUSP4Q13115 394 aa12.68□□□□□ -0.38
SNF8-215ENST00000515572 FILIP1LQ4L180 1135 aa12.68□□□□□ -0.38
SNF8-215ENST00000515572 RARS2Q5T160 578 aaKnown RBP12.68□□□□□ -0.38
SNF8-215ENST00000515572 PHLDB3Q6NSJ2 640 aa12.68□□□□□ -0.38
SNF8-215ENST00000515572 GPR149Q86SP6 731 aa12.68□□□□□ -0.38
SNF8-215ENST00000515572 SPATA2LQ8IUW3 424 aaPredicted RBP12.68□□□□□ -0.38
SNF8-215ENST00000515572 ATAD1Q8NBU5 361 aa12.68□□□□□ -0.38
SNF8-215ENST00000515572 RIPOR3Q96MK2 946 aa12.68□□□□□ -0.38
SNF8-215ENST00000515572 NECTIN4Q96NY8 510 aa12.68□□□□□ -0.38
SNF8-215ENST00000515572 ANP32EQ9BTT0 268 aa12.68□□□□□ -0.38
SNF8-215ENST00000515572 DPEP3Q9H4B8 488 aa12.68□□□□□ -0.38
SNF8-215ENST00000515572 CRTAC1Q9NQ79 661 aa12.68□□□□□ -0.38
SNF8-215ENST00000515572 PRDM6Q9NQX0 595 aa12.68□□□□□ -0.38
SNF8-215ENST00000515572 TMLHEQ9NVH6 421 aa12.68□□□□□ -0.38
SNF8-215ENST00000515572 ABI2Q9NYB9 513 aaPredicted RBP12.68□□□□□ -0.38
SNF8-215ENST00000515572 APEX2Q9UBZ4 518 aa12.68□□□□□ -0.38
SNF8-215ENST00000515572 YIPF1Q9Y548 306 aa12.68□□□□□ -0.38
SNF8-215ENST00000515572 DENND4AQ7Z401 1863 aa12.68□□□□□ -0.38
SNF8-215ENST00000515572 ATP8B3O60423 1300 aa12.67□□□□□ -0.38
SNF8-215ENST00000515572 MYH10P35580 1976 aa12.67□□□□□ -0.38
SNF8-215ENST00000515572 RFPL2O75678 378 aa12.67□□□□□ -0.38
SNF8-215ENST00000515572 HAPLN1P10915 354 aaPredicted RBP12.67□□□□□ -0.38
SNF8-215ENST00000515572 MTHFRP42898 656 aa12.67□□□□□ -0.38
SNF8-215ENST00000515572 MAGEA11P43364 429 aa12.67□□□□□ -0.38
SNF8-215ENST00000515572 ALDH1A3P47895 512 aa12.67□□□□□ -0.38
SNF8-215ENST00000515572 EPHB3P54753 998 aa12.67□□□□□ -0.38
SNF8-215ENST00000515572 RPL10AP62906 217 aaKnown RBP12.67□□□□□ -0.38
SNF8-215ENST00000515572 MRPS5P82675 430 aaKnown RBP12.67□□□□□ -0.38
SNF8-215ENST00000515572 CYP27A1Q02318 531 aa12.67□□□□□ -0.38
SNF8-215ENST00000515572 CLUL1Q15846 466 aa12.67□□□□□ -0.38
SNF8-215ENST00000515572 MGAT5BQ3V5L5 792 aa12.67□□□□□ -0.38
SNF8-215ENST00000515572 MDH1BQ5I0G3 518 aa12.67□□□□□ -0.38
SNF8-215ENST00000515572 ATAT1Q5SQI0 421 aa12.67□□□□□ -0.38
SNF8-215ENST00000515572 VSTM1Q6UX27 236 aa12.67□□□□□ -0.38
SNF8-215ENST00000515572 TMC5Q6UXY8 1006 aa12.67□□□□□ -0.38
SNF8-215ENST00000515572 APTXQ7Z2E3 356 aaKnown RBP12.67□□□□□ -0.38
SNF8-215ENST00000515572 ACOT1Q86TX2 421 aa12.67□□□□□ -0.38
SNF8-215ENST00000515572 ARHGEF19Q8IW93 802 aa12.67□□□□□ -0.38
SNF8-215ENST00000515572 ELMOD1Q8N336 334 aa12.67□□□□□ -0.38
SNF8-215ENST00000515572 C12orf76Q8N812 135 aaPredicted RBP12.67□□□□□ -0.38
SNF8-215ENST00000515572 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.67□□□□□ -0.38
SNF8-215ENST00000515572 WHAMMQ8TF30 809 aa12.67□□□□□ -0.38
SNF8-215ENST00000515572 SMG7Q92540 1137 aaKnown RBP12.67□□□□□ -0.38
SNF8-215ENST00000515572 MYLPFQ96A32 169 aa12.67□□□□□ -0.38
SNF8-215ENST00000515572 PCED1BQ96HM7 432 aa12.67□□□□□ -0.38
SNF8-215ENST00000515572 TMEM176AQ96HP8 235 aa12.67□□□□□ -0.38
SNF8-215ENST00000515572 CEP295NLQ96MC4 621 aa12.67□□□□□ -0.38
SNF8-215ENST00000515572 SEPT5Q99719 369 aaPredicted RBP12.67□□□□□ -0.38
SNF8-215ENST00000515572 ELOVL4Q9GZR5 314 aa12.67□□□□□ -0.38
SNF8-215ENST00000515572 CRISPLD1Q9H336 500 aa12.67□□□□□ -0.38
SNF8-215ENST00000515572 PIDD1Q9HB75 910 aa12.67□□□□□ -0.38
SNF8-215ENST00000515572 UBE2TQ9NPD8 197 aaPredicted RBP12.67□□□□□ -0.38
SNF8-215ENST00000515572 PLCB1Q9NQ66 1216 aa12.67□□□□□ -0.38
SNF8-215ENST00000515572 HMGXB4Q9UGU5 601 aa12.67□□□□□ -0.38
SNF8-215ENST00000515572 DAAM1Q9Y4D1 1078 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms