RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 GCLMP48507 274 aa8.9□□□□□ -0.98
CCL28-204ENST00000514421 MYL6P60660 151 aa8.9□□□□□ -0.98
CCL28-204ENST00000514421 MYL7Q01449 175 aa8.9□□□□□ -0.98
CCL28-204ENST00000514421 PPP3CAQ08209 521 aa8.9□□□□□ -0.98
CCL28-204ENST00000514421 SMARCB1Q12824 385 aa8.9□□□□□ -0.98
CCL28-204ENST00000514421 CBX2Q14781 532 aaPredicted RBP8.9□□□□□ -0.98
CCL28-204ENST00000514421 SOWAHAQ2M3V2 549 aa8.9□□□□□ -0.98
CCL28-204ENST00000514421 WDR72Q3MJ13 1102 aa8.9□□□□□ -0.98
CCL28-204ENST00000514421 PPM1LQ5SGD2 360 aa8.9□□□□□ -0.98
CCL28-204ENST00000514421 TDRD10Q5VZ19 366 aaKnown RBP8.9□□□□□ -0.98
CCL28-204ENST00000514421 KRT39Q6A163 491 aa8.9□□□□□ -0.98
CCL28-204ENST00000514421 DCP1BQ8IZD4 617 aaKnown RBP8.9□□□□□ -0.98
CCL28-204ENST00000514421 PDCL2Q8N4E4 241 aa8.9□□□□□ -0.98
CCL28-204ENST00000514421 TAF4BQ92750 862 aa8.9□□□□□ -0.98
CCL28-204ENST00000514421 CNOT6LQ96LI5 555 aaKnown RBP8.9□□□□□ -0.98
CCL28-204ENST00000514421 MMS19Q96T76 1030 aa8.9□□□□□ -0.98
CCL28-204ENST00000514421 DNAJC7Q99615 494 aa8.9□□□□□ -0.98
CCL28-204ENST00000514421 BAG1Q99933 345 aaPredicted RBP8.9□□□□□ -0.98
CCL28-204ENST00000514421 ACBD6Q9BR61 282 aa8.9□□□□□ -0.98
CCL28-204ENST00000514421 PHF7Q9BWX1 381 aaPredicted RBP8.9□□□□□ -0.98
CCL28-204ENST00000514421 XYLT2Q9H1B5 865 aa8.9□□□□□ -0.98
CCL28-204ENST00000514421 VRTNQ9H8Y1 702 aa8.9□□□□□ -0.98
CCL28-204ENST00000514421 CYP4F11Q9HBI6 524 aa8.9□□□□□ -0.98
CCL28-204ENST00000514421 DDX43Q9NXZ2 648 aaKnown RBP8.9□□□□□ -0.98
CCL28-204ENST00000514421 MAGEC2Q9UBF1 373 aaPredicted RBP8.9□□□□□ -0.98
CCL28-204ENST00000514421 ARMCX3Q9UH62 379 aaPredicted RBP8.9□□□□□ -0.98
CCL28-204ENST00000514421 CAPN11Q9UMQ6 739 aa8.9□□□□□ -0.98
CCL28-204ENST00000514421 SPTBN5Q9NRC6 3674 aaKnown RBP8.9□□□□□ -0.98
CCL28-204ENST00000514421 USP27XA6NNY8 438 aa8.89□□□□□ -0.99
CCL28-204ENST00000514421 PRRG1O14668 218 aa8.89□□□□□ -0.99
CCL28-204ENST00000514421 XYLBO75191 536 aa8.89□□□□□ -0.99
CCL28-204ENST00000514421 TACC1O75410 805 aa8.89□□□□□ -0.99
CCL28-204ENST00000514421 SEC24AO95486 1093 aa8.89□□□□□ -0.99
CCL28-204ENST00000514421 VNN1O95497 513 aa8.89□□□□□ -0.99
CCL28-204ENST00000514421 HLA-DRAP01903 254 aa8.89□□□□□ -0.99
CCL28-204ENST00000514421 POU2F2P09086 479 aa8.89□□□□□ -0.99
CCL28-204ENST00000514421 WEE2P0C1S8 567 aa8.89□□□□□ -0.99
CCL28-204ENST00000514421 OR4Q2P0C623 313 aa8.89□□□□□ -0.99
CCL28-204ENST00000514421 TRIM49P0CI25 452 aa8.89□□□□□ -0.99
CCL28-204ENST00000514421 TRIM49CP0CI26 452 aa8.89□□□□□ -0.99
CCL28-204ENST00000514421 P4HA1P13674 534 aa8.89□□□□□ -0.99
CCL28-204ENST00000514421 WARSP23381 471 aaKnown RBP8.89□□□□□ -0.99
CCL28-204ENST00000514421 PCSK1P29120 753 aa8.89□□□□□ -0.99
CCL28-204ENST00000514421 HOXA9P31269 272 aa8.89□□□□□ -0.99
CCL28-204ENST00000514421 HNRNPH3P31942 346 aaKnown RBP8.89□□□□□ -0.99
CCL28-204ENST00000514421 GNL1P36915 607 aaPredicted RBP8.89□□□□□ -0.99
CCL28-204ENST00000514421 TNNC1P63316 161 aa8.89□□□□□ -0.99
CCL28-204ENST00000514421 TSPY1Q01534 308 aa8.89□□□□□ -0.99
CCL28-204ENST00000514421 ADCY1Q08828 1119 aa8.89□□□□□ -0.99
CCL28-204ENST00000514421 MEA1Q16626 185 aa8.89□□□□□ -0.99
CCL28-204ENST00000514421 MAN2A1Q16706 1144 aa8.89□□□□□ -0.99
CCL28-204ENST00000514421 CCDC40Q4G0X9 1142 aa8.89□□□□□ -0.99
CCL28-204ENST00000514421 ZNF667Q5HYK9 610 aa8.89□□□□□ -0.99
CCL28-204ENST00000514421 RNF19BQ6ZMZ0 732 aa8.89□□□□□ -0.99
CCL28-204ENST00000514421 LRRTM3Q86VH5 581 aa8.89□□□□□ -0.99
CCL28-204ENST00000514421 ADHFE1Q8IWW8 467 aa8.89□□□□□ -0.99
CCL28-204ENST00000514421 SLC7A14Q8TBB6 771 aa8.89□□□□□ -0.99
CCL28-204ENST00000514421 ADAMTS19Q8TE59 1207 aa8.89□□□□□ -0.99
CCL28-204ENST00000514421 C2orf15Q8WU43 125 aaKnown RBP8.89□□□□□ -0.99
CCL28-204ENST00000514421 SMG7Q92540 1137 aaKnown RBP8.89□□□□□ -0.99
CCL28-204ENST00000514421 ZNF707Q96C28 371 aaPredicted RBP8.89□□□□□ -0.99
CCL28-204ENST00000514421 PPP1R13BQ96KQ4 1090 aa8.89□□□□□ -0.99
CCL28-204ENST00000514421 UHRF1Q96T88 793 aaPredicted RBP8.89□□□□□ -0.99
CCL28-204ENST00000514421 RTP3Q9BQQ7 232 aa8.89□□□□□ -0.99
CCL28-204ENST00000514421 NUP58Q9BVL2 599 aa8.89□□□□□ -0.99
CCL28-204ENST00000514421 EDEM3Q9BZQ6 932 aa8.89□□□□□ -0.99
CCL28-204ENST00000514421 ZCWPW1Q9H0M4 648 aa8.89□□□□□ -0.99
CCL28-204ENST00000514421 VPS16Q9H269 839 aa8.89□□□□□ -0.99
CCL28-204ENST00000514421 PIDD1Q9HB75 910 aa8.89□□□□□ -0.99
CCL28-204ENST00000514421 TMEM8AQ9HCN3 771 aa8.89□□□□□ -0.99
CCL28-204ENST00000514421 TAB2Q9NYJ8 693 aa8.89□□□□□ -0.99
CCL28-204ENST00000514421 HSFX1Q9UBD0 423 aa8.89□□□□□ -0.99
CCL28-204ENST00000514421 NXF1Q9UBU9 619 aaKnown RBP8.89□□□□□ -0.99
CCL28-204ENST00000514421 PAXBP1Q9Y5B6 917 aa8.89□□□□□ -0.99
CCL28-204ENST00000514421 CUL9Q8IWT3 2517 aa8.89□□□□□ -0.99
CCL28-204ENST00000514421 EYSQ5T1H1 3165 aa8.89□□□□□ -0.99
CCL28-204ENST00000514421 SCN1AP35498 2009 aa8.88□□□□□ -0.99
CCL28-204ENST00000514421 COL4A4P53420 1690 aaPredicted RBP8.88□□□□□ -0.99
CCL28-204ENST00000514421 GOLGA6L9A6NEM1 432 aa8.88□□□□□ -0.99
CCL28-204ENST00000514421 CCL16O15467 120 aa8.88□□□□□ -0.99
CCL28-204ENST00000514421 ASS1P00966 412 aaKnown RBP8.88□□□□□ -0.99
CCL28-204ENST00000514421 LRG1P02750 347 aa8.88□□□□□ -0.99
CCL28-204ENST00000514421 TPM2P07951 284 aa8.88□□□□□ -0.99
CCL28-204ENST00000514421 TPM1P09493 284 aa8.88□□□□□ -0.99
CCL28-204ENST00000514421 PDGFRBP09619 1106 aa8.88□□□□□ -0.99
CCL28-204ENST00000514421 PTPN2P17706 415 aa8.88□□□□□ -0.99
CCL28-204ENST00000514421 LMO2P25791 158 aa8.88□□□□□ -0.99
CCL28-204ENST00000514421 CASP14P31944 242 aa8.88□□□□□ -0.99
CCL28-204ENST00000514421 TUFMP49411 452 aaKnown RBP8.88□□□□□ -0.99
CCL28-204ENST00000514421 ADKP55263 362 aaKnown RBP8.88□□□□□ -0.99
CCL28-204ENST00000514421 CDK17Q00537 523 aa8.88□□□□□ -0.99
CCL28-204ENST00000514421 UBXN1Q04323 297 aa8.88□□□□□ -0.99
CCL28-204ENST00000514421 DUSP4Q13115 394 aa8.88□□□□□ -0.99
CCL28-204ENST00000514421 NFE2Q16621 373 aaPredicted RBP8.88□□□□□ -0.99
CCL28-204ENST00000514421 ZNF699Q32M78 642 aa8.88□□□□□ -0.99
CCL28-204ENST00000514421 VWA3BQ502W6 1294 aa8.88□□□□□ -0.99
CCL28-204ENST00000514421 SLC39A12Q504Y0 691 aa8.88□□□□□ -0.99
CCL28-204ENST00000514421 TCERG1LQ5VWI1 586 aa8.88□□□□□ -0.99
CCL28-204ENST00000514421 OSTM1Q86WC4 334 aa8.88□□□□□ -0.99
CCL28-204ENST00000514421 TMTC1Q8IUR5 882 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms