RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 ZCCHC9Q8N567 271 aaKnown RBP8.39□□□□□ -1.07
CLDND1-229ENST00000513988 KRI1Q8N9T8 703 aaKnown RBP8.39□□□□□ -1.07
CLDND1-229ENST00000513988 ZNF419Q96HQ0 510 aaPredicted RBP8.39□□□□□ -1.07
CLDND1-229ENST00000513988 PGBD1Q96JS3 809 aa8.39□□□□□ -1.07
CLDND1-229ENST00000513988 JPH2Q9BR39 696 aaPredicted RBP8.39□□□□□ -1.07
CLDND1-229ENST00000513988 SH2D3AQ9BRG2 576 aa8.39□□□□□ -1.07
CLDND1-229ENST00000513988 HELLSQ9NRZ9 838 aa8.39□□□□□ -1.07
CLDND1-229ENST00000513988 BSNQ9UPA5 3926 aa8.38□□□□□ -1.07
CLDND1-229ENST00000513988 MEI4A8MW99 385 aa8.38□□□□□ -1.07
CLDND1-229ENST00000513988 TMEM189-UBE2V1I3L0A0 370 aa8.38□□□□□ -1.07
CLDND1-229ENST00000513988 MARCH6O60337 910 aa8.38□□□□□ -1.07
CLDND1-229ENST00000513988 NPTXRO95502 500 aa8.38□□□□□ -1.07
CLDND1-229ENST00000513988 C1SP09871 688 aa8.38□□□□□ -1.07
CLDND1-229ENST00000513988 CPB1P15086 417 aa8.38□□□□□ -1.07
CLDND1-229ENST00000513988 FECHP22830 423 aa8.38□□□□□ -1.07
CLDND1-229ENST00000513988 GLDCP23378 1020 aa8.38□□□□□ -1.07
CLDND1-229ENST00000513988 INHBCP55103 352 aa8.38□□□□□ -1.07
CLDND1-229ENST00000513988 CYP4F8P98187 520 aa8.38□□□□□ -1.07
CLDND1-229ENST00000513988 NR1H3Q13133 447 aa8.38□□□□□ -1.07
CLDND1-229ENST00000513988 SEC23AQ15436 765 aa8.38□□□□□ -1.07
CLDND1-229ENST00000513988 LINC00303Q3SY05 128 aa8.38□□□□□ -1.07
CLDND1-229ENST00000513988 HSF5Q4G112 596 aaPredicted RBP8.38□□□□□ -1.07
CLDND1-229ENST00000513988 FBXL19Q6PCT2 694 aa8.38□□□□□ -1.07
CLDND1-229ENST00000513988 IL17RCQ8NAC3 791 aa8.38□□□□□ -1.07
CLDND1-229ENST00000513988 SPATA20Q8TB22 786 aa8.38□□□□□ -1.07
CLDND1-229ENST00000513988 MOCOSQ96EN8 888 aa8.38□□□□□ -1.07
CLDND1-229ENST00000513988 GCNAQ96QF7 691 aa8.38□□□□□ -1.07
CLDND1-229ENST00000513988 MIR1-1HGQ9H1L0 117 aa8.38□□□□□ -1.07
CLDND1-229ENST00000513988 DNAJC25Q9H1X3 360 aa8.38□□□□□ -1.07
CLDND1-229ENST00000513988 EPN3Q9H201 632 aa8.38□□□□□ -1.07
CLDND1-229ENST00000513988 TMEM134Q9H6X4 195 aa8.38□□□□□ -1.07
CLDND1-229ENST00000513988 DISC1Q9NRI5 854 aa8.38□□□□□ -1.07
CLDND1-229ENST00000513988 TMPRSS4Q9NRS4 437 aa8.38□□□□□ -1.07
CLDND1-229ENST00000513988 CALCOCO1Q9P1Z2 691 aa8.38□□□□□ -1.07
CLDND1-229ENST00000513988 FBXL5Q9UKA1 691 aa8.38□□□□□ -1.07
CLDND1-229ENST00000513988 CYP8B1Q9UNU6 501 aa8.38□□□□□ -1.07
CLDND1-229ENST00000513988 TMEM150BA6NC51 233 aa8.37□□□□□ -1.07
CLDND1-229ENST00000513988 ENC1O14682 589 aa8.37□□□□□ -1.07
CLDND1-229ENST00000513988 PTGESO14684 152 aa8.37□□□□□ -1.07
CLDND1-229ENST00000513988 TRIM66O15016 1216 aa8.37□□□□□ -1.07
CLDND1-229ENST00000513988 PPFIA2O75334 1257 aa8.37□□□□□ -1.07
CLDND1-229ENST00000513988 ZNF217O75362 1048 aa8.37□□□□□ -1.07
CLDND1-229ENST00000513988 RECQL4O94761 1208 aa8.37□□□□□ -1.07
CLDND1-229ENST00000513988 FAM87AP0C7U9 286 aa8.37□□□□□ -1.07
CLDND1-229ENST00000513988 IGFBP6P24592 240 aaPredicted RBP8.37□□□□□ -1.07
CLDND1-229ENST00000513988 AVPR1AP37288 418 aa8.37□□□□□ -1.07
CLDND1-229ENST00000513988 BRCC3P46736 316 aa8.37□□□□□ -1.07
CLDND1-229ENST00000513988 ALDH1A3P47895 512 aa8.37□□□□□ -1.07
CLDND1-229ENST00000513988 BNC1Q01954 994 aa8.37□□□□□ -1.07
CLDND1-229ENST00000513988 PCBP1Q15365 356 aaKnown RBP eCLIP8.37□□□□□ -1.07
CLDND1-229ENST00000513988 CTXN3Q4LDR2 81 aa8.37□□□□□ -1.07
CLDND1-229ENST00000513988 XKR3Q5GH77 459 aa8.37□□□□□ -1.07
CLDND1-229ENST00000513988 CMTM8Q8IZV2 173 aa8.37□□□□□ -1.07
CLDND1-229ENST00000513988 PRPF31Q8WWY3 499 aaKnown RBP8.37□□□□□ -1.07
CLDND1-229ENST00000513988 PSPC1Q8WXF1 523 aaKnown RBP8.37□□□□□ -1.07
CLDND1-229ENST00000513988 ATP2A3Q93084 1043 aa8.37□□□□□ -1.07
CLDND1-229ENST00000513988 CEP89Q96ST8 783 aa8.37□□□□□ -1.07
CLDND1-229ENST00000513988 SEMA3CQ99985 751 aa8.37□□□□□ -1.07
CLDND1-229ENST00000513988 SPZ1Q9BXG8 430 aa8.37□□□□□ -1.07
CLDND1-229ENST00000513988 ANO3Q9BYT9 981 aa8.37□□□□□ -1.07
CLDND1-229ENST00000513988 KRT23Q9C075 422 aa8.37□□□□□ -1.07
CLDND1-229ENST00000513988 KIF9Q9HAQ2 790 aa8.37□□□□□ -1.07
CLDND1-229ENST00000513988 CCL26Q9Y258 94 aa8.37□□□□□ -1.07
CLDND1-229ENST00000513988 ASB3Q9Y575 518 aa8.37□□□□□ -1.07
CLDND1-229ENST00000513988 ZNF638Q14966 1978 aaKnown RBP8.36□□□□□ -1.07
CLDND1-229ENST00000513988 FAM86B1E9PN63 330 aa8.36□□□□□ -1.07
CLDND1-229ENST00000513988 BCAT2O15382 392 aaPredicted RBP8.36□□□□□ -1.07
CLDND1-229ENST00000513988 ZBTB24O43167 697 aaPredicted RBP8.36□□□□□ -1.07
CLDND1-229ENST00000513988 FOSP01100 380 aaPredicted RBP8.36□□□□□ -1.07
CLDND1-229ENST00000513988 ITGB2P05107 769 aa8.36□□□□□ -1.07
CLDND1-229ENST00000513988 FAM86B2P0C5J1 330 aa8.36□□□□□ -1.07
CLDND1-229ENST00000513988 GABRG2P18507 467 aa8.36□□□□□ -1.07
CLDND1-229ENST00000513988 IFNAR2P48551 515 aa8.36□□□□□ -1.07
CLDND1-229ENST00000513988 CCT8P50990 548 aa8.36□□□□□ -1.07
CLDND1-229ENST00000513988 ERVPABLB-1P60509 514 aa8.36□□□□□ -1.07
CLDND1-229ENST00000513988 LAMTOR4Q0VGL1 99 aa8.36□□□□□ -1.07
CLDND1-229ENST00000513988 DNAJC3Q13217 504 aa8.36□□□□□ -1.07
CLDND1-229ENST00000513988 NCAPHQ15003 741 aa8.36□□□□□ -1.07
CLDND1-229ENST00000513988 NAB2Q15742 525 aa8.36□□□□□ -1.07
CLDND1-229ENST00000513988 MCMDC2Q4G0Z9 681 aa8.36□□□□□ -1.07
CLDND1-229ENST00000513988 SLC27A1Q6PCB7 646 aa8.36□□□□□ -1.07
CLDND1-229ENST00000513988 BLOC1S3Q6QNY0 202 aa8.36□□□□□ -1.07
CLDND1-229ENST00000513988 RNF19BQ6ZMZ0 732 aa8.36□□□□□ -1.07
CLDND1-229ENST00000513988 DNAJB7Q7Z6W7 309 aaPredicted RBP8.36□□□□□ -1.07
CLDND1-229ENST00000513988 LSMEM2Q8N112 164 aa8.36□□□□□ -1.07
CLDND1-229ENST00000513988 RNF149Q8NC42 400 aa8.36□□□□□ -1.07
CLDND1-229ENST00000513988 EXTL1Q92935 676 aa8.36□□□□□ -1.07
CLDND1-229ENST00000513988 USP13Q92995 863 aaPredicted RBP8.36□□□□□ -1.07
CLDND1-229ENST00000513988 SLC46A2Q9BY10 475 aa8.36□□□□□ -1.07
CLDND1-229ENST00000513988 DUS2Q9NX74 493 aaKnown RBP8.36□□□□□ -1.07
CLDND1-229ENST00000513988 ZMYM5Q9UJ78 669 aa8.36□□□□□ -1.07
CLDND1-229ENST00000513988 CLCA2Q9UQC9 943 aa8.36□□□□□ -1.07
CLDND1-229ENST00000513988 WNT6Q9Y6F9 365 aa8.36□□□□□ -1.07
CLDND1-229ENST00000513988 MED13Q9UHV7 2174 aa8.36□□□□□ -1.07
CLDND1-229ENST00000513988 SVILO95425 2214 aa8.35□□□□□ -1.07
CLDND1-229ENST00000513988 NIPBLQ6KC79 2804 aaeCLIP8.35□□□□□ -1.07
CLDND1-229ENST00000513988 IGLV3-22A0A075B6J6 115 aa8.35□□□□□ -1.07
CLDND1-229ENST00000513988 A0A0D9SFI3 127 aa8.35□□□□□ -1.07
CLDND1-229ENST00000513988 A0A1B0GVT2 93 aa8.35□□□□□ -1.07
CLDND1-229ENST00000513988 VPS37CA5D8V6 355 aaPredicted RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms