RNA–Protein interactions for RNA: ENST00000513341.5

PDLIM5-218, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-218ENST00000513341 TGS1Q96RS0 853 aaKnown RBP4.39□□□□□ -1.71
PDLIM5-218ENST00000513341 RAD9AQ99638 391 aa4.39□□□□□ -1.71
PDLIM5-218ENST00000513341 WNT8AQ9H1J5 351 aa4.39□□□□□ -1.71
PDLIM5-218ENST00000513341 AGO3Q9H9G7 860 aaKnown RBP4.39□□□□□ -1.71
PDLIM5-218ENST00000513341 AATFQ9NY61 560 aaKnown RBP eCLIP4.39□□□□□ -1.71
PDLIM5-218ENST00000513341 PPARGC1AQ9UBK2 798 aaKnown RBP4.39□□□□□ -1.71
PDLIM5-218ENST00000513341 TMX2Q9Y320 296 aa4.39□□□□□ -1.71
PDLIM5-218ENST00000513341 COX11Q9Y6N1 276 aa4.39□□□□□ -1.71
PDLIM5-218ENST00000513341 PTPRCP08575 1304 aa4.39□□□□□ -1.71
PDLIM5-218ENST00000513341 CACNA1BQ00975 2339 aa4.39□□□□□ -1.71
PDLIM5-218ENST00000513341 CACNA1HO95180 2353 aa4.39□□□□□ -1.71
PDLIM5-218ENST00000513341 MYH1P12882 1939 aa4.38□□□□□ -1.71
PDLIM5-218ENST00000513341 KMT2BQ9UMN6 2715 aaPredicted RBP4.38□□□□□ -1.71
PDLIM5-218ENST00000513341 FAM186AA6NE01 2351 aa4.38□□□□□ -1.71
PDLIM5-218ENST00000513341 A0A1W2PRG0 241 aa4.38□□□□□ -1.71
PDLIM5-218ENST00000513341 MYADML2A6NDP7 307 aa4.38□□□□□ -1.71
PDLIM5-218ENST00000513341 VWA5AO00534 786 aa4.38□□□□□ -1.71
PDLIM5-218ENST00000513341 ATP2A1O14983 1001 aa4.38□□□□□ -1.71
PDLIM5-218ENST00000513341 WDR46O15213 610 aaKnown RBP4.38□□□□□ -1.71
PDLIM5-218ENST00000513341 NKRFO15226 690 aaKnown RBP eCLIP4.38□□□□□ -1.71
PDLIM5-218ENST00000513341 CTAGE5O15320 804 aa4.38□□□□□ -1.71
PDLIM5-218ENST00000513341 EFCAB14O75071 495 aa4.38□□□□□ -1.71
PDLIM5-218ENST00000513341 IQCF3P0C7M6 154 aa4.38□□□□□ -1.71
PDLIM5-218ENST00000513341 AVPR2P30518 371 aa4.38□□□□□ -1.71
PDLIM5-218ENST00000513341 ADORA1P30542 326 aa4.38□□□□□ -1.71
PDLIM5-218ENST00000513341 SCNN1GP51170 649 aa4.38□□□□□ -1.71
PDLIM5-218ENST00000513341 KRTAP10-7P60409 375 aaPredicted RBP4.38□□□□□ -1.71
PDLIM5-218ENST00000513341 IL13RA1P78552 427 aa4.38□□□□□ -1.71
PDLIM5-218ENST00000513341 TNFAIP2Q03169 654 aa4.38□□□□□ -1.71
PDLIM5-218ENST00000513341 SHROOM1Q2M3G4 852 aaPredicted RBP4.38□□□□□ -1.71
PDLIM5-218ENST00000513341 SV2CQ496J9 727 aa4.38□□□□□ -1.71
PDLIM5-218ENST00000513341 GORABQ5T7V8 394 aa4.38□□□□□ -1.71
PDLIM5-218ENST00000513341 TMEM200BQ69YZ2 307 aa4.38□□□□□ -1.71
PDLIM5-218ENST00000513341 IQSEC1Q6DN90 963 aa4.38□□□□□ -1.71
PDLIM5-218ENST00000513341 TMEM179Q6ZVK1 233 aa4.38□□□□□ -1.71
PDLIM5-218ENST00000513341 SLC25A43Q8WUT9 341 aaPredicted RBP4.38□□□□□ -1.71
PDLIM5-218ENST00000513341 RABGGTAQ92696 567 aa4.38□□□□□ -1.71
PDLIM5-218ENST00000513341 MRPL38Q96DV4 380 aaKnown RBP4.38□□□□□ -1.71
PDLIM5-218ENST00000513341 SCLYQ96I15 445 aa4.38□□□□□ -1.71
PDLIM5-218ENST00000513341 DRC1Q96MC2 740 aa4.38□□□□□ -1.71
PDLIM5-218ENST00000513341 NEUROD6Q96NK8 337 aa4.38□□□□□ -1.71
PDLIM5-218ENST00000513341 ZFYVE21Q9BQ24 234 aa4.38□□□□□ -1.71
PDLIM5-218ENST00000513341 TRPV6Q9H1D0 765 aa4.38□□□□□ -1.71
PDLIM5-218ENST00000513341 ALDH8A1Q9H2A2 487 aaPredicted RBP4.38□□□□□ -1.71
PDLIM5-218ENST00000513341 TOR3AQ9H497 397 aa4.38□□□□□ -1.71
PDLIM5-218ENST00000513341 GALNT8Q9NY28 637 aa4.38□□□□□ -1.71
PDLIM5-218ENST00000513341 FBXO40Q9UH90 709 aa4.38□□□□□ -1.71
PDLIM5-218ENST00000513341 ZHX1Q9UKY1 873 aaPredicted RBP4.38□□□□□ -1.71
PDLIM5-218ENST00000513341 SH3BP1Q9Y3L3 701 aa4.38□□□□□ -1.71
PDLIM5-218ENST00000513341 TECTAO75443 2155 aa4.38□□□□□ -1.71
PDLIM5-218ENST00000513341 TRIOO75962 3097 aa4.38□□□□□ -1.71
PDLIM5-218ENST00000513341 GRIN2DO15399 1336 aa4.38□□□□□ -1.71
PDLIM5-218ENST00000513341 UMODL1Q5DID0 1318 aa4.38□□□□□ -1.71
PDLIM5-218ENST00000513341 FANCIQ9NVI1 1328 aa4.38□□□□□ -1.71
PDLIM5-218ENST00000513341 EPG5Q9HCE0 2579 aa4.38□□□□□ -1.71
PDLIM5-218ENST00000513341 ZNF292O60281 2723 aa4.37□□□□□ -1.71
PDLIM5-218ENST00000513341 ABHD14A-ACY1A0A1B0GW23 586 aa4.37□□□□□ -1.71
PDLIM5-218ENST00000513341 TMEM221A6NGB7 291 aa4.37□□□□□ -1.71
PDLIM5-218ENST00000513341 M0R296 226 aa4.37□□□□□ -1.71
PDLIM5-218ENST00000513341 STK10O94804 968 aaKnown RBP4.37□□□□□ -1.71
PDLIM5-218ENST00000513341 GJB5O95377 273 aa4.37□□□□□ -1.71
PDLIM5-218ENST00000513341 COL6A2P12110 1019 aa4.37□□□□□ -1.71
PDLIM5-218ENST00000513341 GUCY1A2P33402 732 aa4.37□□□□□ -1.71
PDLIM5-218ENST00000513341 SHMT1P34896 483 aa4.37□□□□□ -1.71
PDLIM5-218ENST00000513341 NBL1P41271 181 aa4.37□□□□□ -1.71
PDLIM5-218ENST00000513341 MCAMP43121 646 aa4.37□□□□□ -1.71
PDLIM5-218ENST00000513341 MAN2A2P49641 1150 aa4.37□□□□□ -1.71
PDLIM5-218ENST00000513341 MEOX1P50221 254 aa4.37□□□□□ -1.71
PDLIM5-218ENST00000513341 GABPAQ06546 454 aa4.37□□□□□ -1.71
PDLIM5-218ENST00000513341 BFSP2Q13515 415 aa4.37□□□□□ -1.71
PDLIM5-218ENST00000513341 SEPT2Q15019 361 aa4.37□□□□□ -1.71
PDLIM5-218ENST00000513341 FSCN1Q16658 493 aaKnown RBP4.37□□□□□ -1.71
PDLIM5-218ENST00000513341 KRTAP5-11Q6L8G4 156 aa4.37□□□□□ -1.71
PDLIM5-218ENST00000513341 CXCL17Q6UXB2 119 aa4.37□□□□□ -1.71
PDLIM5-218ENST00000513341 HTR3DQ70Z44 454 aa4.37□□□□□ -1.71
PDLIM5-218ENST00000513341 DEFB128Q7Z7B8 93 aa4.37□□□□□ -1.71
PDLIM5-218ENST00000513341 MCF2L2Q86YR7 1114 aa4.37□□□□□ -1.71
PDLIM5-218ENST00000513341 PRPF38AQ8NAV1 312 aaKnown RBP4.37□□□□□ -1.71
PDLIM5-218ENST00000513341 LPPQ93052 612 aa4.37□□□□□ -1.71
PDLIM5-218ENST00000513341 CCDC17Q96LX7 622 aa4.37□□□□□ -1.71
PDLIM5-218ENST00000513341 BTBD2Q9BX70 525 aa4.37□□□□□ -1.71
PDLIM5-218ENST00000513341 TEX13BQ9BXU2 312 aa4.37□□□□□ -1.71
PDLIM5-218ENST00000513341 FTOQ9C0B1 505 aaKnown RBP eCLIP4.37□□□□□ -1.71
PDLIM5-218ENST00000513341 VCPKMTQ9H867 229 aa4.37□□□□□ -1.71
PDLIM5-218ENST00000513341 ALG13Q9NP73 1137 aaKnown RBP4.37□□□□□ -1.71
PDLIM5-218ENST00000513341 SWAP70Q9UH65 585 aa4.37□□□□□ -1.71
PDLIM5-218ENST00000513341 R3HCC1Q9Y3T6 440 aaKnown RBP4.37□□□□□ -1.71
PDLIM5-218ENST00000513341 INSL6Q9Y581 213 aa4.37□□□□□ -1.71
PDLIM5-218ENST00000513341 COL11A1P12107 1806 aaPredicted RBP4.37□□□□□ -1.71
PDLIM5-218ENST00000513341 COL4A3Q01955 1670 aa4.36□□□□□ -1.71
PDLIM5-218ENST00000513341 DMDP11532 3685 aa4.36□□□□□ -1.71
PDLIM5-218ENST00000513341 A0A0G2JNJ9 132 aa4.36□□□□□ -1.71
PDLIM5-218ENST00000513341 GRID2IPA4D2P6 1211 aa4.36□□□□□ -1.71
PDLIM5-218ENST00000513341 LINC01553A4QN01 128 aa4.36□□□□□ -1.71
PDLIM5-218ENST00000513341 PRR23AA6NEV1 266 aa4.36□□□□□ -1.71
PDLIM5-218ENST00000513341 ASB14A6NK59 587 aa4.36□□□□□ -1.71
PDLIM5-218ENST00000513341 H3BNC9 293 aa4.36□□□□□ -1.71
PDLIM5-218ENST00000513341 H3BQ06 376 aaPredicted RBP4.36□□□□□ -1.71
PDLIM5-218ENST00000513341 ADCY6O43306 1168 aa4.36□□□□□ -1.71
PDLIM5-218ENST00000513341 SUSD5O60279 629 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms