RNA–Protein interactions for RNA: ENST00000513318.1

HMGXB3-204, Transcript of HMG-box containing 3, humanhuman

TSL 3

Gene HMGXB3, Length 749 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-204ENST00000513318 AUTS2Q8WXX7 1259 aa8.1□□□□□ -1.11
HMGXB3-204ENST00000513318 JAKMIP2Q96AA8 810 aa8.1□□□□□ -1.11
HMGXB3-204ENST00000513318 ELMO3Q96BJ8 720 aa8.1□□□□□ -1.11
HMGXB3-204ENST00000513318 FAM161BQ96MY7 647 aa8.1□□□□□ -1.11
HMGXB3-204ENST00000513318 NAP1L5Q96NT1 182 aaPredicted RBP8.1□□□□□ -1.11
HMGXB3-204ENST00000513318 ARID3AQ99856 593 aa8.1□□□□□ -1.11
HMGXB3-204ENST00000513318 ACBD6Q9BR61 282 aa8.1□□□□□ -1.11
HMGXB3-204ENST00000513318 LSM14BQ9BX40 385 aaKnown RBP8.1□□□□□ -1.11
HMGXB3-204ENST00000513318 EMILIN2Q9BXX0 1053 aa8.1□□□□□ -1.11
HMGXB3-204ENST00000513318 DNAI2Q9GZS0 605 aa8.1□□□□□ -1.11
HMGXB3-204ENST00000513318 SNX25Q9H3E2 840 aa8.1□□□□□ -1.11
HMGXB3-204ENST00000513318 NSUN3Q9H649 340 aaKnown RBP8.1□□□□□ -1.11
HMGXB3-204ENST00000513318 RXFP1Q9HBX9 757 aa8.1□□□□□ -1.11
HMGXB3-204ENST00000513318 DDX43Q9NXZ2 648 aaKnown RBP8.1□□□□□ -1.11
HMGXB3-204ENST00000513318 IFNKQ9P0W0 207 aa8.1□□□□□ -1.11
HMGXB3-204ENST00000513318 TSR3Q9UJK0 312 aaKnown RBP8.1□□□□□ -1.11
HMGXB3-204ENST00000513318 FBXL5Q9UKA1 691 aa8.1□□□□□ -1.11
HMGXB3-204ENST00000513318 BARX2Q9UMQ3 279 aaPredicted RBP8.1□□□□□ -1.11
HMGXB3-204ENST00000513318 SIK3Q9Y2K2 1263 aa8.1□□□□□ -1.11
HMGXB3-204ENST00000513318 CDY1Q9Y6F8 540 aa8.1□□□□□ -1.11
HMGXB3-204ENST00000513318 NUP210Q8TEM1 1887 aaPredicted RBP8.1□□□□□ -1.11
HMGXB3-204ENST00000513318 REV3LO60673 3130 aa8.09□□□□□ -1.11
HMGXB3-204ENST00000513318 HIDE1A8MVS5 230 aa8.09□□□□□ -1.11
HMGXB3-204ENST00000513318 A8MXQ7 604 aa8.09□□□□□ -1.11
HMGXB3-204ENST00000513318 TEX28O15482 410 aa8.09□□□□□ -1.11
HMGXB3-204ENST00000513318 TEX33O43247 280 aa8.09□□□□□ -1.11
HMGXB3-204ENST00000513318 TBC1D4O60343 1298 aa8.09□□□□□ -1.11
HMGXB3-204ENST00000513318 RNF40O75150 1001 aa8.09□□□□□ -1.11
HMGXB3-204ENST00000513318 CILPO75339 1184 aa8.09□□□□□ -1.11
HMGXB3-204ENST00000513318 CXCL14O95715 111 aa8.09□□□□□ -1.11
HMGXB3-204ENST00000513318 CNPP09543 421 aaKnown RBP8.09□□□□□ -1.11
HMGXB3-204ENST00000513318 WEE2P0C1S8 567 aa8.09□□□□□ -1.11
HMGXB3-204ENST00000513318 CPB1P15086 417 aa8.09□□□□□ -1.11
HMGXB3-204ENST00000513318 UCHL3P15374 230 aa8.09□□□□□ -1.11
HMGXB3-204ENST00000513318 CLCN1P35523 988 aa8.09□□□□□ -1.11
HMGXB3-204ENST00000513318 GNL1P36915 607 aaPredicted RBP8.09□□□□□ -1.11
HMGXB3-204ENST00000513318 NDST1P52848 882 aa8.09□□□□□ -1.11
HMGXB3-204ENST00000513318 MFAP3P55082 362 aa8.09□□□□□ -1.11
HMGXB3-204ENST00000513318 CDH8P55286 799 aa8.09□□□□□ -1.11
HMGXB3-204ENST00000513318 TSPY1Q01534 308 aa8.09□□□□□ -1.11
HMGXB3-204ENST00000513318 ROR1Q01973 937 aa8.09□□□□□ -1.11
HMGXB3-204ENST00000513318 SMARCB1Q12824 385 aa8.09□□□□□ -1.11
HMGXB3-204ENST00000513318 MAPRE1Q15691 268 aaKnown RBP8.09□□□□□ -1.11
HMGXB3-204ENST00000513318 INTS6LQ5JSJ4 861 aaKnown RBP8.09□□□□□ -1.11
HMGXB3-204ENST00000513318 KLHDC7AQ5VTJ3 777 aa8.09□□□□□ -1.11
HMGXB3-204ENST00000513318 Q7L0L9 218 aa8.09□□□□□ -1.11
HMGXB3-204ENST00000513318 PPFIBP1Q86W92 1011 aa8.09□□□□□ -1.11
HMGXB3-204ENST00000513318 OSTM1Q86WC4 334 aa8.09□□□□□ -1.11
HMGXB3-204ENST00000513318 PARP9Q8IXQ6 854 aa8.09□□□□□ -1.11
HMGXB3-204ENST00000513318 DEFB123Q8N688 67 aa8.09□□□□□ -1.11
HMGXB3-204ENST00000513318 UBR7Q8N806 425 aa8.09□□□□□ -1.11
HMGXB3-204ENST00000513318 OR10T2Q8NGX3 314 aa8.09□□□□□ -1.11
HMGXB3-204ENST00000513318 IQCDQ96DY2 449 aa8.09□□□□□ -1.11
HMGXB3-204ENST00000513318 TNIP3Q96KP6 325 aa8.09□□□□□ -1.11
HMGXB3-204ENST00000513318 PCMTD1Q96MG8 357 aaPredicted RBP8.09□□□□□ -1.11
HMGXB3-204ENST00000513318 CDCA3Q99618 268 aaPredicted RBP8.09□□□□□ -1.11
HMGXB3-204ENST00000513318 RTP3Q9BQQ7 232 aa8.09□□□□□ -1.11
HMGXB3-204ENST00000513318 SYT15Q9BQS2 421 aa8.09□□□□□ -1.11
HMGXB3-204ENST00000513318 CLSTN3Q9BQT9 956 aa8.09□□□□□ -1.11
HMGXB3-204ENST00000513318 MRPL45Q9BRJ2 306 aaKnown RBP8.09□□□□□ -1.11
HMGXB3-204ENST00000513318 NT5C1AQ9BXI3 368 aa8.09□□□□□ -1.11
HMGXB3-204ENST00000513318 TRIM5Q9C035 493 aa8.09□□□□□ -1.11
HMGXB3-204ENST00000513318 XPO4Q9C0E2 1151 aaKnown RBP8.09□□□□□ -1.11
HMGXB3-204ENST00000513318 SDCBP2Q9H190 292 aa8.09□□□□□ -1.11
HMGXB3-204ENST00000513318 GANQ9H2C0 597 aa8.09□□□□□ -1.11
HMGXB3-204ENST00000513318 SIX2Q9NPC8 291 aa8.09□□□□□ -1.11
HMGXB3-204ENST00000513318 CISHQ9NSE2 258 aa8.09□□□□□ -1.11
HMGXB3-204ENST00000513318 FAM207AQ9NSI2 230 aaPredicted RBP8.09□□□□□ -1.11
HMGXB3-204ENST00000513318 CDH9Q9ULB4 789 aa8.09□□□□□ -1.11
HMGXB3-204ENST00000513318 STXBP5LQ9Y2K9 1186 aa8.09□□□□□ -1.11
HMGXB3-204ENST00000513318 PCDHGC5Q9Y5F6 944 aa8.09□□□□□ -1.11
HMGXB3-204ENST00000513318 FHOD1Q9Y613 1164 aa8.09□□□□□ -1.11
HMGXB3-204ENST00000513318 MTCH2Q9Y6C9 303 aa8.09□□□□□ -1.11
HMGXB3-204ENST00000513318 ITIH6Q6UXX5 1313 aa8.08□□□□□ -1.12
HMGXB3-204ENST00000513318 WDR27A2RRH5 827 aa8.08□□□□□ -1.12
HMGXB3-204ENST00000513318 GLUD1P00367 558 aa8.08□□□□□ -1.12
HMGXB3-204ENST00000513318 C1RP00736 705 aa8.08□□□□□ -1.12
HMGXB3-204ENST00000513318 RPL17P18621 184 aaKnown RBP8.08□□□□□ -1.12
HMGXB3-204ENST00000513318 CD58P19256 250 aa8.08□□□□□ -1.12
HMGXB3-204ENST00000513318 ACAT1P24752 427 aaKnown RBP8.08□□□□□ -1.12
HMGXB3-204ENST00000513318 LMO2P25791 158 aa8.08□□□□□ -1.12
HMGXB3-204ENST00000513318 KLRC2P26717 231 aa8.08□□□□□ -1.12
HMGXB3-204ENST00000513318 OR1D2P34982 312 aa8.08□□□□□ -1.12
HMGXB3-204ENST00000513318 PBX1P40424 430 aa8.08□□□□□ -1.12
HMGXB3-204ENST00000513318 KLK7P49862 253 aa8.08□□□□□ -1.12
HMGXB3-204ENST00000513318 GPR17Q13304 367 aa8.08□□□□□ -1.12
HMGXB3-204ENST00000513318 RAB33AQ14088 237 aa8.08□□□□□ -1.12
HMGXB3-204ENST00000513318 ADGRE1Q14246 886 aa8.08□□□□□ -1.12
HMGXB3-204ENST00000513318 NFE2Q16621 373 aaPredicted RBP8.08□□□□□ -1.12
HMGXB3-204ENST00000513318 DUSP6Q16828 381 aa8.08□□□□□ -1.12
HMGXB3-204ENST00000513318 TPGS2Q68CL5 300 aa8.08□□□□□ -1.12
HMGXB3-204ENST00000513318 IQCEQ6IPM2 695 aa8.08□□□□□ -1.12
HMGXB3-204ENST00000513318 DPY19L2P1Q6NXN4 242 aa8.08□□□□□ -1.12
HMGXB3-204ENST00000513318 GJB7Q6PEY0 223 aa8.08□□□□□ -1.12
HMGXB3-204ENST00000513318 TMEM270Q6UE05 265 aa8.08□□□□□ -1.12
HMGXB3-204ENST00000513318 RRAGAQ7L523 313 aa8.08□□□□□ -1.12
HMGXB3-204ENST00000513318 ADGRD2Q7Z7M1 963 aa8.08□□□□□ -1.12
HMGXB3-204ENST00000513318 GLYCTKQ8IVS8 523 aa8.08□□□□□ -1.12
HMGXB3-204ENST00000513318 DCP1BQ8IZD4 617 aaKnown RBP8.08□□□□□ -1.12
HMGXB3-204ENST00000513318 B3GALNT2Q8NCR0 500 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms