RNA–Protein interactions for RNA: ENST00000513206.5

TRIO-221, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 5

Gene TRIO, Length 7,995 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-221ENST00000513206 UGP2Q16851 508 aa16.78■□□□□ 0.28
TRIO-221ENST00000513206 PDXDC1Q6P996 788 aa16.78■□□□□ 0.28
TRIO-221ENST00000513206 USP13Q92995 863 aaPredicted RBP16.78■□□□□ 0.28
TRIO-221ENST00000513206 NOD2Q9HC29 1040 aa16.78■□□□□ 0.28
TRIO-221ENST00000513206 C6orf203Q9P0P8 240 aaPredicted RBP16.78■□□□□ 0.28
TRIO-221ENST00000513206 ZC3H7BQ9UGR2 993 aaKnown RBP16.78■□□□□ 0.28
TRIO-221ENST00000513206 FAM32AQ9Y421 112 aaKnown RBP16.78■□□□□ 0.28
TRIO-221ENST00000513206 HSPA1AP0DMV8 641 aaKnown RBP16.78■□□□□ 0.28
TRIO-221ENST00000513206 HSPA1BP0DMV9 641 aaKnown RBP16.78■□□□□ 0.28
TRIO-221ENST00000513206 PHKG1Q16816 387 aa16.78■□□□□ 0.28
TRIO-221ENST00000513206 RIT2Q99578 217 aa16.78■□□□□ 0.28
TRIO-221ENST00000513206 ZNF229Q9UJW7 825 aa16.78■□□□□ 0.28
TRIO-221ENST00000513206 CFAP99D6REC4 459 aa16.78■□□□□ 0.28
TRIO-221ENST00000513206 TGFB2P61812 414 aa16.78■□□□□ 0.28
TRIO-221ENST00000513206 THAP11Q96EK4 314 aa16.78■□□□□ 0.28
TRIO-221ENST00000513206 GPR75-ASB3A0A0A6YYF3 556 aa16.77■□□□□ 0.28
TRIO-221ENST00000513206 MUTP22033 750 aa16.77■□□□□ 0.28
TRIO-221ENST00000513206 BYSLQ13895 437 aaKnown RBP16.77■□□□□ 0.28
TRIO-221ENST00000513206 ZDHHC15Q96MV8 337 aa16.77■□□□□ 0.28
TRIO-221ENST00000513206 CHP1Q99653 195 aa16.77■□□□□ 0.28
TRIO-221ENST00000513206 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.77■□□□□ 0.28
TRIO-221ENST00000513206 ANKRD26Q9UPS8 1709 aa16.77■□□□□ 0.28
TRIO-221ENST00000513206 PJA2O43164 708 aa16.77■□□□□ 0.28
TRIO-221ENST00000513206 CCDC22O60826 627 aa16.77■□□□□ 0.28
TRIO-221ENST00000513206 ASS1P00966 412 aaKnown RBP16.77■□□□□ 0.28
TRIO-221ENST00000513206 ZNF286BP0CG31 522 aa16.77■□□□□ 0.28
TRIO-221ENST00000513206 KPNB1Q14974 876 aaKnown RBP16.77■□□□□ 0.28
TRIO-221ENST00000513206 DNAJC9Q8WXX5 260 aa16.77■□□□□ 0.28
TRIO-221ENST00000513206 DNAJC7Q99615 494 aa16.77■□□□□ 0.28
TRIO-221ENST00000513206 AURKCQ9UQB9 309 aa16.77■□□□□ 0.28
TRIO-221ENST00000513206 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.77■□□□□ 0.28
TRIO-221ENST00000513206 ZNF177Q13360 481 aaPredicted RBP16.77■□□□□ 0.28
TRIO-221ENST00000513206 C3orf62Q6ZUJ4 267 aa16.77■□□□□ 0.28
TRIO-221ENST00000513206 FBXO16Q8IX29 292 aaPredicted RBP16.77■□□□□ 0.28
TRIO-221ENST00000513206 PCSK9Q8NBP7 692 aaKnown RBP16.77■□□□□ 0.28
TRIO-221ENST00000513206 MAP3K14Q99558 947 aa16.77■□□□□ 0.28
TRIO-221ENST00000513206 BRD8Q9H0E9 1235 aa16.77■□□□□ 0.28
TRIO-221ENST00000513206 GBA2Q9HCG7 927 aaPredicted RBP16.77■□□□□ 0.28
TRIO-221ENST00000513206 ZNF185O15231 689 aa16.77■□□□□ 0.28
TRIO-221ENST00000513206 ADCY3O60266 1144 aa16.77■□□□□ 0.28
TRIO-221ENST00000513206 GPD1P21695 349 aa16.77■□□□□ 0.28
TRIO-221ENST00000513206 CAP2P40123 477 aa16.77■□□□□ 0.28
TRIO-221ENST00000513206 LRRC14Q15048 493 aa16.77■□□□□ 0.28
TRIO-221ENST00000513206 CCDC85BQ15834 202 aaPredicted RBP16.77■□□□□ 0.28
TRIO-221ENST00000513206 METTL16Q86W50 562 aaKnown RBP16.77■□□□□ 0.28
TRIO-221ENST00000513206 ATP6V0D2Q8N8Y2 350 aa16.77■□□□□ 0.28
TRIO-221ENST00000513206 TUBE1Q9UJT0 475 aa16.77■□□□□ 0.28
TRIO-221ENST00000513206 URB1O60287 2271 aaKnown RBP16.77■□□□□ 0.27
TRIO-221ENST00000513206 ATP1A1P05023 1023 aaKnown RBP16.77■□□□□ 0.27
TRIO-221ENST00000513206 POLBP06746 335 aa16.77■□□□□ 0.27
TRIO-221ENST00000513206 IL10P22301 178 aa16.77■□□□□ 0.27
TRIO-221ENST00000513206 KRT35Q92764 455 aa16.77■□□□□ 0.27
TRIO-221ENST00000513206 GRAMD1AQ96CP6 724 aa16.77■□□□□ 0.27
TRIO-221ENST00000513206 CNTNAP5Q8WYK1 1306 aa16.77■□□□□ 0.27
TRIO-221ENST00000513206 PITPNM2Q9BZ72 1349 aa16.77■□□□□ 0.27
TRIO-221ENST00000513206 PLA2G4AP47712 749 aa16.77■□□□□ 0.27
TRIO-221ENST00000513206 ARFIP2P53365 341 aa16.77■□□□□ 0.27
TRIO-221ENST00000513206 DPYDQ12882 1025 aa16.77■□□□□ 0.27
TRIO-221ENST00000513206 MYL2P10916 166 aa16.76■□□□□ 0.27
TRIO-221ENST00000513206 MKRN4PQ13434 485 aaPredicted RBP16.76■□□□□ 0.27
TRIO-221ENST00000513206 USP10Q14694 798 aaKnown RBP16.76■□□□□ 0.27
TRIO-221ENST00000513206 OR9Q1Q8NGQ5 310 aa16.76■□□□□ 0.27
TRIO-221ENST00000513206 FBXO32Q969P5 355 aa16.76■□□□□ 0.27
TRIO-221ENST00000513206 SEC16BQ96JE7 1060 aa16.76■□□□□ 0.27
TRIO-221ENST00000513206 TASP1Q9H6P5 420 aa16.76■□□□□ 0.27
TRIO-221ENST00000513206 SCUBE2Q9NQ36 999 aa16.76■□□□□ 0.27
TRIO-221ENST00000513206 PCDHB12Q9Y5F1 795 aa16.76■□□□□ 0.27
TRIO-221ENST00000513206 RNASEH1O60930 286 aaKnown RBP16.76■□□□□ 0.27
TRIO-221ENST00000513206 VSNL1P62760 191 aa16.76■□□□□ 0.27
TRIO-221ENST00000513206 MAP3K10Q02779 954 aa16.76■□□□□ 0.27
TRIO-221ENST00000513206 RFX8Q6ZV50 586 aa16.76■□□□□ 0.27
TRIO-221ENST00000513206 SEPT8Q92599 483 aa16.76■□□□□ 0.27
TRIO-221ENST00000513206 C17orf75Q9HAS0 396 aa16.76■□□□□ 0.27
TRIO-221ENST00000513206 ALG13Q9NP73 1137 aaKnown RBP16.76■□□□□ 0.27
TRIO-221ENST00000513206 THP07101 528 aa16.76■□□□□ 0.27
TRIO-221ENST00000513206 FXR2P51116 673 aaKnown RBP eCLIP16.76■□□□□ 0.274e-7■■■□□ 18.4
TRIO-221ENST00000513206 CSE1LP55060 971 aaKnown RBP16.76■□□□□ 0.27
TRIO-221ENST00000513206 ZNF200P98182 395 aaPredicted RBP16.76■□□□□ 0.27
TRIO-221ENST00000513206 NUP93Q8N1F7 819 aa16.76■□□□□ 0.27
TRIO-221ENST00000513206 PACS2Q86VP3 889 aa16.76■□□□□ 0.27
TRIO-221ENST00000513206 PRMT1Q99873 361 aaKnown RBP16.76■□□□□ 0.27
TRIO-221ENST00000513206 GOLPH3Q9H4A6 298 aa16.76■□□□□ 0.27
TRIO-221ENST00000513206 STARD7Q9NQZ5 370 aa16.76■□□□□ 0.27
TRIO-221ENST00000513206 GIMAP4Q9NUV9 329 aa16.76■□□□□ 0.27
TRIO-221ENST00000513206 PHF2O75151 1096 aa16.76■□□□□ 0.27
TRIO-221ENST00000513206 ACADMP11310 421 aa16.76■□□□□ 0.27
TRIO-221ENST00000513206 SFSWAPQ12872 951 aaKnown RBP16.76■□□□□ 0.27
TRIO-221ENST00000513206 BFSP2Q13515 415 aa16.76■□□□□ 0.27
TRIO-221ENST00000513206 SPATA4Q8NEY3 305 aa16.76■□□□□ 0.27
TRIO-221ENST00000513206 TCP11X1B4DZS4 312 aa16.76■□□□□ 0.27
TRIO-221ENST00000513206 AP1G2O75843 785 aa16.76■□□□□ 0.27
TRIO-221ENST00000513206 KRT8P05787 483 aa16.76■□□□□ 0.27
TRIO-221ENST00000513206 SLC2A3P11169 496 aa16.76■□□□□ 0.27
TRIO-221ENST00000513206 HSPA9P38646 679 aaKnown RBP16.76■□□□□ 0.27
TRIO-221ENST00000513206 NCALDP61601 193 aa16.76■□□□□ 0.27
TRIO-221ENST00000513206 CNGA3Q16281 694 aa16.76■□□□□ 0.27
TRIO-221ENST00000513206 SGO1Q5FBB7 561 aa16.76■□□□□ 0.27
TRIO-221ENST00000513206 INTS5Q6P9B9 1019 aaKnown RBP16.76■□□□□ 0.27
TRIO-221ENST00000513206 DEFB132Q7Z7B7 95 aa16.76■□□□□ 0.27
TRIO-221ENST00000513206 SPEF2Q9C093 1822 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms