RNA–Protein interactions for RNA: ENST00000512962.5

SDHA-215, Transcript of succinate dehydrogenase complex flavoprotein subunit A, humanhuman

TSL 3

Gene SDHA, Length 935 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHA-215ENST00000512962 ADAMTS20P59510 1910 aa13.49□□□□□ -0.25
SDHA-215ENST00000512962 CCDC196A0A1B0GTZ2 297 aa13.48□□□□□ -0.25
SDHA-215ENST00000512962 MYBPHLA2RUH7 354 aa13.48□□□□□ -0.25
SDHA-215ENST00000512962 PRRG1O14668 218 aa13.48□□□□□ -0.25
SDHA-215ENST00000512962 FOXD2O60548 495 aaPredicted RBP13.48□□□□□ -0.25
SDHA-215ENST00000512962 RPP40O75818 363 aaKnown RBP13.48□□□□□ -0.25
SDHA-215ENST00000512962 VNN2O95498 520 aa13.48□□□□□ -0.25
SDHA-215ENST00000512962 MYL4P12829 197 aa13.48□□□□□ -0.25
SDHA-215ENST00000512962 IRX6P78412 446 aaPredicted RBP13.48□□□□□ -0.25
SDHA-215ENST00000512962 ELAVL2Q12926 359 aaKnown RBP13.48□□□□□ -0.25
SDHA-215ENST00000512962 LRRC32Q14392 662 aa13.48□□□□□ -0.25
SDHA-215ENST00000512962 UPP1Q16831 310 aa13.48□□□□□ -0.25
SDHA-215ENST00000512962 TSNAXIP1Q2TAA8 658 aa13.48□□□□□ -0.25
SDHA-215ENST00000512962 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.48□□□□□ -0.252e-6■■□□□ 11.5
SDHA-215ENST00000512962 EARS2Q5JPH6 523 aaKnown RBP13.48□□□□□ -0.25
SDHA-215ENST00000512962 RNF43Q68DV7 783 aa13.48□□□□□ -0.25
SDHA-215ENST00000512962 ALG1LQ6GMV1 187 aa13.48□□□□□ -0.25
SDHA-215ENST00000512962 PDXDC1Q6P996 788 aa13.48□□□□□ -0.25
SDHA-215ENST00000512962 LRSAM1Q6UWE0 723 aa13.48□□□□□ -0.25
SDHA-215ENST00000512962 PDZD4Q76G19 769 aaPredicted RBP13.48□□□□□ -0.25
SDHA-215ENST00000512962 MAEAQ7L5Y9 396 aa13.48□□□□□ -0.25
SDHA-215ENST00000512962 TCEAL8Q8IYN2 117 aa13.48□□□□□ -0.25
SDHA-215ENST00000512962 DEPDC1BQ8WUY9 529 aa13.48□□□□□ -0.25
SDHA-215ENST00000512962 CHFRQ96EP1 664 aa13.48□□□□□ -0.25
SDHA-215ENST00000512962 CEP63Q96MT8 703 aa13.48□□□□□ -0.25
SDHA-215ENST00000512962 LRRC3Q9BY71 257 aa13.48□□□□□ -0.25
SDHA-215ENST00000512962 TRPV4Q9HBA0 871 aa13.48□□□□□ -0.25
SDHA-215ENST00000512962 SH3GLB2Q9NR46 395 aa13.48□□□□□ -0.25
SDHA-215ENST00000512962 GJB4Q9NTQ9 266 aa13.48□□□□□ -0.25
SDHA-215ENST00000512962 KCNJ14Q9UNX9 436 aa13.48□□□□□ -0.25
SDHA-215ENST00000512962 GDAQ9Y2T3 454 aa13.48□□□□□ -0.25
SDHA-215ENST00000512962 SMG1Q96Q15 3661 aaKnown RBP13.48□□□□□ -0.25
SDHA-215ENST00000512962 LRRIQ4A6NIV6 560 aa13.47□□□□□ -0.25
SDHA-215ENST00000512962 C4orf47A7E2U8 309 aa13.47□□□□□ -0.25
SDHA-215ENST00000512962 ATF2P15336 505 aa13.47□□□□□ -0.25
SDHA-215ENST00000512962 HOXA6P31267 233 aa13.47□□□□□ -0.25
SDHA-215ENST00000512962 RARRES1P49788 294 aa13.47□□□□□ -0.25
SDHA-215ENST00000512962 EPHA5P54756 1037 aa13.47□□□□□ -0.25
SDHA-215ENST00000512962 AKAP17AQ02040 695 aaKnown RBP13.47□□□□□ -0.25
SDHA-215ENST00000512962 TNK2Q07912 1038 aa13.47□□□□□ -0.25
SDHA-215ENST00000512962 NCBP1Q09161 790 aaKnown RBP13.47□□□□□ -0.25
SDHA-215ENST00000512962 FCHO2Q0JRZ9 810 aa13.47□□□□□ -0.25
SDHA-215ENST00000512962 CDCA2Q69YH5 1023 aaPredicted RBP13.47□□□□□ -0.25
SDHA-215ENST00000512962 RTL10Q7L3V2 364 aa13.47□□□□□ -0.25
SDHA-215ENST00000512962 TMC8Q8IU68 726 aa13.47□□□□□ -0.25
SDHA-215ENST00000512962 TPH2Q8IWU9 490 aa13.47□□□□□ -0.25
SDHA-215ENST00000512962 EXOC8Q8IYI6 725 aa13.47□□□□□ -0.25
SDHA-215ENST00000512962 CEP120Q8N960 986 aa13.47□□□□□ -0.25
SDHA-215ENST00000512962 DAGLBQ8NCG7 672 aa13.47□□□□□ -0.25
SDHA-215ENST00000512962 EDEM2Q9BV94 578 aa13.47□□□□□ -0.25
SDHA-215ENST00000512962 SCNM1Q9BWG6 230 aa13.47□□□□□ -0.25
SDHA-215ENST00000512962 FZD8Q9H461 694 aa13.47□□□□□ -0.25
SDHA-215ENST00000512962 ZSWIM4Q9H7M6 989 aa13.47□□□□□ -0.25
SDHA-215ENST00000512962 FBXL5Q9UKA1 691 aa13.47□□□□□ -0.25
SDHA-215ENST00000512962 FNDC3AQ9Y2H6 1198 aaKnown RBP13.47□□□□□ -0.25
SDHA-215ENST00000512962 LAMA5O15230 3695 aa13.46□□□□□ -0.25
SDHA-215ENST00000512962 OBSL1O75147 1896 aa13.46□□□□□ -0.25
SDHA-215ENST00000512962 TSC2P49815 1807 aa13.46□□□□□ -0.25
SDHA-215ENST00000512962 TNRC6BQ9UPQ9 1833 aaKnown RBP13.46□□□□□ -0.25
SDHA-215ENST00000512962 FREM2Q5SZK8 3169 aa13.46□□□□□ -0.25
SDHA-215ENST00000512962 SOBPA7XYQ1 873 aa13.46□□□□□ -0.25
SDHA-215ENST00000512962 DCLK1O15075 740 aa13.46□□□□□ -0.25
SDHA-215ENST00000512962 MEFVO15553 781 aaPredicted RBP13.46□□□□□ -0.25
SDHA-215ENST00000512962 USO1O60763 962 aaKnown RBP13.46□□□□□ -0.25
SDHA-215ENST00000512962 DKC1O60832 514 aaKnown RBP eCLIP13.46□□□□□ -0.25
SDHA-215ENST00000512962 NEFLP07196 543 aa13.46□□□□□ -0.25
SDHA-215ENST00000512962 DAB2P98082 770 aa13.46□□□□□ -0.25
SDHA-215ENST00000512962 TWF1Q12792 350 aa13.46□□□□□ -0.25
SDHA-215ENST00000512962 KIAA1211LQ6NV74 962 aa13.46□□□□□ -0.25
SDHA-215ENST00000512962 XKR5Q6UX68 686 aa13.46□□□□□ -0.25
SDHA-215ENST00000512962 ANKS3Q6ZW76 656 aa13.46□□□□□ -0.25
SDHA-215ENST00000512962 OTUD6AQ7L8S5 288 aa13.46□□□□□ -0.25
SDHA-215ENST00000512962 PGBD3Q8N328 593 aa13.46□□□□□ -0.25
SDHA-215ENST00000512962 PIGOQ8TEQ8 1089 aa13.46□□□□□ -0.25
SDHA-215ENST00000512962 ZCCHC14Q8WYQ9 949 aaKnown RBP13.46□□□□□ -0.25
SDHA-215ENST00000512962 LOXL4Q96JB6 756 aa13.46□□□□□ -0.25
SDHA-215ENST00000512962 FAM20AQ96MK3 541 aa13.46□□□□□ -0.25
SDHA-215ENST00000512962 AGXT2Q9BYV1 514 aa13.46□□□□□ -0.25
SDHA-215ENST00000512962 CCDC113Q9H0I3 377 aa13.46□□□□□ -0.25
SDHA-215ENST00000512962 DUSP15Q9H1R2 295 aaPredicted RBP13.46□□□□□ -0.25
SDHA-215ENST00000512962 DNAJC25Q9H1X3 360 aa13.46□□□□□ -0.25
SDHA-215ENST00000512962 ATP13A2Q9NQ11 1180 aa13.46□□□□□ -0.25
SDHA-215ENST00000512962 FOXD3Q9UJU5 478 aaPredicted RBP13.46□□□□□ -0.25
SDHA-215ENST00000512962 ANK1P16157 1881 aa13.46□□□□□ -0.26
SDHA-215ENST00000512962 PTPRDP23468 1912 aa13.45□□□□□ -0.26
SDHA-215ENST00000512962 LNP1A1A4G5 178 aa13.45□□□□□ -0.26
SDHA-215ENST00000512962 TAF4O00268 1085 aa13.45□□□□□ -0.26
SDHA-215ENST00000512962 ZNF197O14709 1029 aa13.45□□□□□ -0.26
SDHA-215ENST00000512962 CHADO15335 359 aa13.45□□□□□ -0.26
SDHA-215ENST00000512962 ST8SIA5O15466 376 aa13.45□□□□□ -0.26
SDHA-215ENST00000512962 TNFRSF21O75509 655 aa13.45□□□□□ -0.26
SDHA-215ENST00000512962 PRAMEF12O95522 483 aa13.45□□□□□ -0.26
SDHA-215ENST00000512962 EPB42P16452 691 aa13.45□□□□□ -0.26
SDHA-215ENST00000512962 PDIA3P30101 505 aaKnown RBP13.45□□□□□ -0.26
SDHA-215ENST00000512962 KPNA1P52294 538 aaPredicted RBP13.45□□□□□ -0.26
SDHA-215ENST00000512962 MLLT6P55198 1093 aaPredicted RBP13.45□□□□□ -0.26
SDHA-215ENST00000512962 PLK5Q496M5 336 aa13.45□□□□□ -0.26
SDHA-215ENST00000512962 DGKKQ5KSL6 1271 aa13.45□□□□□ -0.26
SDHA-215ENST00000512962 NAIF1Q69YI7 327 aaPredicted RBP13.45□□□□□ -0.26
SDHA-215ENST00000512962 CACNA2D4Q7Z3S7 1137 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms