RNA–Protein interactions for RNA: ENST00000512844.5

CHD1-209, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 848 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-209ENST00000512844 LINC00476Q8WZB0 136 aa6.63□□□□□ -1.35
CHD1-209ENST00000512844 OSBPL9Q96SU4 736 aa6.63□□□□□ -1.35
CHD1-209ENST00000512844 SPATA5L1Q9BVQ7 753 aa6.63□□□□□ -1.35
CHD1-209ENST00000512844 SMOC2Q9H3U7 446 aa6.63□□□□□ -1.35
CHD1-209ENST00000512844 KIAA1586Q9HCI6 787 aa6.63□□□□□ -1.35
CHD1-209ENST00000512844 ISM1B1AKI9 464 aa6.62□□□□□ -1.35
CHD1-209ENST00000512844 FRS3O43559 492 aa6.62□□□□□ -1.35
CHD1-209ENST00000512844 MAP4K4O95819 1239 aaPredicted RBP6.62□□□□□ -1.35
CHD1-209ENST00000512844 HRGP04196 525 aa6.62□□□□□ -1.35
CHD1-209ENST00000512844 PPP3CBP16298 524 aa6.62□□□□□ -1.35
CHD1-209ENST00000512844 ZKSCAN1P17029 563 aaPredicted RBP6.62□□□□□ -1.35
CHD1-209ENST00000512844 EN2P19622 333 aaPredicted RBP6.62□□□□□ -1.35
CHD1-209ENST00000512844 GATA3P23771 443 aa6.62□□□□□ -1.35
CHD1-209ENST00000512844 CXCR5P32302 372 aa6.62□□□□□ -1.35
CHD1-209ENST00000512844 FOLR3P41439 243 aa6.62□□□□□ -1.35
CHD1-209ENST00000512844 SLC11A2P49281 568 aa6.62□□□□□ -1.35
CHD1-209ENST00000512844 NBPF8Q3BBV2 869 aa6.62□□□□□ -1.35
CHD1-209ENST00000512844 MGAT5BQ3V5L5 792 aa6.62□□□□□ -1.35
CHD1-209ENST00000512844 TEDDM1Q5T9Z0 273 aa6.62□□□□□ -1.35
CHD1-209ENST00000512844 CHST15Q7LFX5 561 aaPredicted RBP6.62□□□□□ -1.35
CHD1-209ENST00000512844 FAM136AQ96C01 138 aa6.62□□□□□ -1.35
CHD1-209ENST00000512844 LRIG1Q96JA1 1093 aa6.62□□□□□ -1.35
CHD1-209ENST00000512844 ACTRT3Q9BYD9 372 aa6.62□□□□□ -1.35
CHD1-209ENST00000512844 ZNF287Q9HBT7 754 aa6.62□□□□□ -1.35
CHD1-209ENST00000512844 SACM1LQ9NTJ5 587 aa6.62□□□□□ -1.35
CHD1-209ENST00000512844 MRPS18AQ9NVS2 196 aaKnown RBP6.62□□□□□ -1.35
CHD1-209ENST00000512844 GEMIN8Q9NWZ8 242 aaKnown RBP6.62□□□□□ -1.35
CHD1-209ENST00000512844 SYBUQ9NX95 663 aa6.62□□□□□ -1.35
CHD1-209ENST00000512844 VSX1Q9NZR4 365 aaPredicted RBP6.62□□□□□ -1.35
CHD1-209ENST00000512844 CCDC151A5D8V7 595 aa6.61□□□□□ -1.35
CHD1-209ENST00000512844 RHCEP18577 417 aa6.61□□□□□ -1.35
CHD1-209ENST00000512844 PEX2P28328 305 aa6.61□□□□□ -1.35
CHD1-209ENST00000512844 WNT3P56703 355 aa6.61□□□□□ -1.35
CHD1-209ENST00000512844 RHDQ02161 417 aa6.61□□□□□ -1.35
CHD1-209ENST00000512844 KAZNQ674X7 775 aa6.61□□□□□ -1.35
CHD1-209ENST00000512844 VWA1Q6PCB0 445 aa6.61□□□□□ -1.35
CHD1-209ENST00000512844 APOA5Q6Q788 366 aa6.61□□□□□ -1.35
CHD1-209ENST00000512844 LPIN2Q92539 896 aa6.61□□□□□ -1.35
CHD1-209ENST00000512844 C22orf23Q9BZE7 217 aa6.61□□□□□ -1.35
CHD1-209ENST00000512844 ZNF518BQ9C0D4 1074 aa6.61□□□□□ -1.35
CHD1-209ENST00000512844 IKZF4Q9H2S9 585 aa6.61□□□□□ -1.35
CHD1-209ENST00000512844 DMRT1Q9Y5R6 373 aa6.61□□□□□ -1.35
CHD1-209ENST00000512844 EPN1Q9Y6I3 576 aaPredicted RBP6.61□□□□□ -1.35
CHD1-209ENST00000512844 CHRM2P08172 466 aa6.6□□□□□ -1.35
CHD1-209ENST00000512844 KRT4P19013 534 aa6.6□□□□□ -1.35
CHD1-209ENST00000512844 LRPAP1P30533 357 aa6.6□□□□□ -1.35
CHD1-209ENST00000512844 SUMO3P55854 103 aaPredicted RBP6.6□□□□□ -1.35
CHD1-209ENST00000512844 LILRA4P59901 499 aa6.6□□□□□ -1.35
CHD1-209ENST00000512844 PURAQ00577 322 aaKnown RBP6.6□□□□□ -1.35
CHD1-209ENST00000512844 E2F2Q14209 437 aa6.6□□□□□ -1.35
CHD1-209ENST00000512844 HLTFQ14527 1009 aaKnown RBP eCLIP6.6□□□□□ -1.35
CHD1-209ENST00000512844 ICE2Q659A1 982 aa6.6□□□□□ -1.35
CHD1-209ENST00000512844 TMPRSS9Q7Z410 1059 aa6.6□□□□□ -1.35
CHD1-209ENST00000512844 MYCBPAPQ8TBZ2 947 aa6.6□□□□□ -1.35
CHD1-209ENST00000512844 CAGE1Q8TC20 777 aa6.6□□□□□ -1.35
CHD1-209ENST00000512844 PTDSS2Q9BVG9 487 aa6.6□□□□□ -1.35
CHD1-209ENST00000512844 ALG8Q9BVK2 526 aa6.6□□□□□ -1.35
CHD1-209ENST00000512844 MS4A7Q9GZW8 240 aaPredicted RBP6.6□□□□□ -1.35
CHD1-209ENST00000512844 NUP62CLQ9H1M0 184 aa6.6□□□□□ -1.35
CHD1-209ENST00000512844 ATP6V0A4Q9HBG4 840 aa6.6□□□□□ -1.35
CHD1-209ENST00000512844 AFF4Q9UHB7 1163 aaKnown RBP6.6□□□□□ -1.35
CHD1-209ENST00000512844 COL4A3Q01955 1670 aa6.6□□□□□ -1.35
CHD1-209ENST00000512844 A6NNZ2 444 aa6.59□□□□□ -1.35
CHD1-209ENST00000512844 TBX3O15119 743 aa6.59□□□□□ -1.35
CHD1-209ENST00000512844 MPPED1O15442 326 aa6.59□□□□□ -1.35
CHD1-209ENST00000512844 PROM1O43490 865 aa6.59□□□□□ -1.35
CHD1-209ENST00000512844 RPL17P18621 184 aaKnown RBP6.59□□□□□ -1.35
CHD1-209ENST00000512844 CTBP1Q13363 440 aa6.59□□□□□ -1.35
CHD1-209ENST00000512844 CNGA2Q16280 664 aa6.59□□□□□ -1.35
CHD1-209ENST00000512844 ARHGAP40Q5TG30 622 aa6.59□□□□□ -1.35
CHD1-209ENST00000512844 TSHZ1Q6ZSZ6 1077 aa6.59□□□□□ -1.35
CHD1-209ENST00000512844 ATRIPQ8WXE1 791 aa6.59□□□□□ -1.35
CHD1-209ENST00000512844 ANKS1AQ92625 1134 aa6.59□□□□□ -1.35
CHD1-209ENST00000512844 FKBP10Q96AY3 582 aa6.59□□□□□ -1.35
CHD1-209ENST00000512844 TIFAQ96CG3 184 aa6.59□□□□□ -1.35
CHD1-209ENST00000512844 APIPQ96GX9 242 aa6.59□□□□□ -1.35
CHD1-209ENST00000512844 A1CFQ9NQ94 594 aaKnown RBP6.59□□□□□ -1.35
CHD1-209ENST00000512844 SNX13Q9Y5W8 968 aa6.59□□□□□ -1.35
CHD1-209ENST00000512844 A0A087WWL8 130 aa6.58□□□□□ -1.36
CHD1-209ENST00000512844 RASSF9O75901 435 aa6.58□□□□□ -1.36
CHD1-209ENST00000512844 NXPH3O95157 252 aa6.58□□□□□ -1.36
CHD1-209ENST00000512844 PPIFP30405 207 aaKnown RBP6.58□□□□□ -1.36
CHD1-209ENST00000512844 MPLP40238 635 aa6.58□□□□□ -1.36
CHD1-209ENST00000512844 ZNF134P52741 427 aa6.58□□□□□ -1.36
CHD1-209ENST00000512844 ARFIP2P53365 341 aa6.58□□□□□ -1.36
CHD1-209ENST00000512844 PRKAG1P54619 331 aa6.58□□□□□ -1.36
CHD1-209ENST00000512844 PTPRRQ15256 657 aa6.58□□□□□ -1.36
CHD1-209ENST00000512844 PLAC9Q5JTB6 97 aa6.58□□□□□ -1.36
CHD1-209ENST00000512844 SWSAP1Q6NVH7 229 aa6.58□□□□□ -1.36
CHD1-209ENST00000512844 Q6ZPA2 131 aa6.58□□□□□ -1.36
CHD1-209ENST00000512844 SMCR8Q8TEV9 937 aaPredicted RBP6.58□□□□□ -1.36
CHD1-209ENST00000512844 IPCEF1Q8WWN9 437 aaPredicted RBP6.58□□□□□ -1.36
CHD1-209ENST00000512844 RAPGEF4Q8WZA2 1011 aa6.58□□□□□ -1.36
CHD1-209ENST00000512844 TFAP2BQ92481 460 aa6.58□□□□□ -1.36
CHD1-209ENST00000512844 DUSP26Q9BV47 211 aa6.58□□□□□ -1.36
CHD1-209ENST00000512844 BHMT2Q9H2M3 363 aa6.58□□□□□ -1.36
CHD1-209ENST00000512844 KLC4Q9NSK0 619 aa6.58□□□□□ -1.36
CHD1-209ENST00000512844 CPNE7Q9UBL6 633 aa6.58□□□□□ -1.36
CHD1-209ENST00000512844 ZNHIT2Q9UHR6 403 aa6.58□□□□□ -1.36
CHD1-209ENST00000512844 PCDHGB6Q9Y5F9 930 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms