RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 FAM196BA6NMK8 535 aa9.29□□□□□ -0.92
VCAN-208ENST00000512590 C1QTNF3-AMACRE9PGA6 284 aa9.29□□□□□ -0.92
VCAN-208ENST00000512590 KERAO60938 352 aa9.29□□□□□ -0.92
VCAN-208ENST00000512590 DNTTP04053 509 aa9.29□□□□□ -0.92
VCAN-208ENST00000512590 ITGALP20701 1170 aa9.29□□□□□ -0.92
VCAN-208ENST00000512590 CASP14P31944 242 aa9.29□□□□□ -0.92
VCAN-208ENST00000512590 GEMIN4P57678 1058 aaKnown RBP9.29□□□□□ -0.92
VCAN-208ENST00000512590 ELF2Q15723 593 aa9.29□□□□□ -0.92
VCAN-208ENST00000512590 INSCQ1MX18 579 aa9.29□□□□□ -0.92
VCAN-208ENST00000512590 ZSCAN2Q7Z7L9 614 aaPredicted RBP9.29□□□□□ -0.92
VCAN-208ENST00000512590 NEK9Q8TD19 979 aa9.29□□□□□ -0.92
VCAN-208ENST00000512590 KIAA1143Q96AT1 154 aaPredicted RBP9.29□□□□□ -0.92
VCAN-208ENST00000512590 AGAP3Q96P47 875 aa9.29□□□□□ -0.92
VCAN-208ENST00000512590 OSBPL1AQ9BXW6 950 aa9.29□□□□□ -0.92
VCAN-208ENST00000512590 SAYSD1Q9NPB0 183 aa9.29□□□□□ -0.92
VCAN-208ENST00000512590 ZFATQ9P243 1243 aa9.29□□□□□ -0.92
VCAN-208ENST00000512590 SNX14Q9Y5W7 946 aa9.29□□□□□ -0.92
VCAN-208ENST00000512590 TOP2BQ02880 1626 aa9.29□□□□□ -0.92
VCAN-208ENST00000512590 A0A096LPK6 155 aa9.29□□□□□ -0.92
VCAN-208ENST00000512590 A6NCN8 305 aa9.29□□□□□ -0.92
VCAN-208ENST00000512590 VPS26AO75436 327 aa9.29□□□□□ -0.92
VCAN-208ENST00000512590 PLTPP55058 493 aa9.29□□□□□ -0.92
VCAN-208ENST00000512590 RWDD2BP57060 319 aa9.29□□□□□ -0.92
VCAN-208ENST00000512590 TRIP10Q15642 601 aa9.29□□□□□ -0.92
VCAN-208ENST00000512590 MIB1Q86YT6 1006 aa9.29□□□□□ -0.92
VCAN-208ENST00000512590 SEPT1Q8WYJ6 367 aa9.29□□□□□ -0.92
VCAN-208ENST00000512590 CYTH2Q99418 400 aa9.29□□□□□ -0.92
VCAN-208ENST00000512590 XPNPEP3Q9NQH7 507 aa9.29□□□□□ -0.92
VCAN-208ENST00000512590 SMARCAL1Q9NZC9 954 aa9.29□□□□□ -0.92
VCAN-208ENST00000512590 DNMT3LQ9UJW3 386 aa9.29□□□□□ -0.92
VCAN-208ENST00000512590 GNG14A0A1W2PPG7 69 aa9.29□□□□□ -0.92
VCAN-208ENST00000512590 MGAT4DA6NG13 374 aa9.29□□□□□ -0.92
VCAN-208ENST00000512590 C16orf96A6NNT2 1141 aa9.29□□□□□ -0.92
VCAN-208ENST00000512590 OR10H2O60403 315 aa9.29□□□□□ -0.92
VCAN-208ENST00000512590 HNRNPCP07910 306 aaKnown RBP eCLIP9.29□□□□□ -0.92
VCAN-208ENST00000512590 HOXB7P09629 217 aa9.29□□□□□ -0.92
VCAN-208ENST00000512590 DPEP1P16444 411 aa9.29□□□□□ -0.92
VCAN-208ENST00000512590 RIN1Q13671 783 aa9.29□□□□□ -0.92
VCAN-208ENST00000512590 STAT4Q14765 748 aa9.29□□□□□ -0.92
VCAN-208ENST00000512590 LIX1Q8N485 282 aa9.29□□□□□ -0.92
VCAN-208ENST00000512590 NEDD1Q8NHV4 660 aa9.29□□□□□ -0.92
VCAN-208ENST00000512590 KLHL29Q96CT2 875 aa9.29□□□□□ -0.92
VCAN-208ENST00000512590 STAMBPL1Q96FJ0 436 aa9.29□□□□□ -0.92
VCAN-208ENST00000512590 MED8Q96G25 268 aa9.29□□□□□ -0.92
VCAN-208ENST00000512590 DYDC2Q96IM9 177 aa9.29□□□□□ -0.92
VCAN-208ENST00000512590 RIPOR3Q96MK2 946 aa9.29□□□□□ -0.92
VCAN-208ENST00000512590 IP6K2Q9UHH9 426 aa9.29□□□□□ -0.92
VCAN-208ENST00000512590 OR10H1Q9Y4A9 318 aa9.29□□□□□ -0.92
VCAN-208ENST00000512590 SNX8Q9Y5X2 465 aa9.29□□□□□ -0.92
VCAN-208ENST00000512590 KDM5BQ9UGL1 1544 aa9.28□□□□□ -0.92
VCAN-208ENST00000512590 GOLGA8KD6RF30 607 aa9.28□□□□□ -0.92
VCAN-208ENST00000512590 KCNQ2O43526 872 aa9.28□□□□□ -0.92
VCAN-208ENST00000512590 GCATO75600 419 aa9.28□□□□□ -0.92
VCAN-208ENST00000512590 RPS12P25398 132 aaKnown RBP9.28□□□□□ -0.92
VCAN-208ENST00000512590 ARHGDIBP52566 201 aa9.28□□□□□ -0.92
VCAN-208ENST00000512590 ACTR2P61160 394 aa9.28□□□□□ -0.92
VCAN-208ENST00000512590 PARGQ86W56 976 aa9.28□□□□□ -0.92
VCAN-208ENST00000512590 ADGRG2Q8IZP9 1017 aa9.28□□□□□ -0.92
VCAN-208ENST00000512590 GPD1LQ8N335 351 aa9.28□□□□□ -0.92
VCAN-208ENST00000512590 TNIP2Q8NFZ5 429 aa9.28□□□□□ -0.92
VCAN-208ENST00000512590 CALML6Q8TD86 181 aa9.28□□□□□ -0.92
VCAN-208ENST00000512590 PIGKQ92643 395 aa9.28□□□□□ -0.92
VCAN-208ENST00000512590 MTG1Q9BT17 334 aaPredicted RBP9.28□□□□□ -0.92
VCAN-208ENST00000512590 PRRG3Q9BZD7 231 aa9.28□□□□□ -0.92
VCAN-208ENST00000512590 AGO2Q9UKV8 859 aaKnown RBP9.28□□□□□ -0.92
VCAN-208ENST00000512590 NEURL1BA8MQ27 555 aa9.28□□□□□ -0.92
VCAN-208ENST00000512590 PPP2R1BP30154 601 aa9.28□□□□□ -0.92
VCAN-208ENST00000512590 TLX1P31314 330 aaPredicted RBP9.28□□□□□ -0.92
VCAN-208ENST00000512590 RGS7P49802 495 aa9.28□□□□□ -0.92
VCAN-208ENST00000512590 IQCF2Q8IXL9 164 aa9.28□□□□□ -0.92
VCAN-208ENST00000512590 CYP4Z2PQ8N1L4 340 aa9.28□□□□□ -0.92
VCAN-208ENST00000512590 FAM133AQ8N9E0 248 aa9.28□□□□□ -0.92
VCAN-208ENST00000512590 ASZ1Q8WWH4 475 aa9.28□□□□□ -0.92
VCAN-208ENST00000512590 INPP5DQ92835 1189 aa9.28□□□□□ -0.92
VCAN-208ENST00000512590 DHRS1Q96LJ7 313 aa9.28□□□□□ -0.92
VCAN-208ENST00000512590 BRIP1Q9BX63 1249 aa9.28□□□□□ -0.92
VCAN-208ENST00000512590 TRIM4Q9C037 500 aa9.28□□□□□ -0.92
VCAN-208ENST00000512590 SLITRK2Q9H156 845 aa9.28□□□□□ -0.92
VCAN-208ENST00000512590 ANAPC7Q9UJX3 599 aa9.28□□□□□ -0.92
VCAN-208ENST00000512590 PDE2AO00408 941 aaPredicted RBP9.28□□□□□ -0.92
VCAN-208ENST00000512590 KATNA1O75449 491 aa9.28□□□□□ -0.92
VCAN-208ENST00000512590 FAM200BP0CF97 657 aa9.28□□□□□ -0.92
VCAN-208ENST00000512590 MAPK1P28482 360 aa9.28□□□□□ -0.92
VCAN-208ENST00000512590 FAM171BQ6P995 826 aa9.28□□□□□ -0.92
VCAN-208ENST00000512590 GET4Q7L5D6 327 aaPredicted RBP9.28□□□□□ -0.92
VCAN-208ENST00000512590 ZNF354BQ96LW1 612 aa9.28□□□□□ -0.92
VCAN-208ENST00000512590 KIFC1Q9BW19 673 aa9.28□□□□□ -0.92
VCAN-208ENST00000512590 ADNPQ9H2P0 1102 aa9.28□□□□□ -0.92
VCAN-208ENST00000512590 DDX28Q9NUL7 540 aaKnown RBP9.28□□□□□ -0.92
VCAN-208ENST00000512590 MGRN1O60291 552 aa9.28□□□□□ -0.92
VCAN-208ENST00000512590 COX7A2P14406 83 aa9.28□□□□□ -0.92
VCAN-208ENST00000512590 ACADSBP45954 432 aa9.28□□□□□ -0.92
VCAN-208ENST00000512590 CDH6P55285 790 aa9.28□□□□□ -0.92
VCAN-208ENST00000512590 PABPC1LQ4VXU2 614 aaKnown RBP9.28□□□□□ -0.92
VCAN-208ENST00000512590 GRAMD4Q6IC98 578 aa9.28□□□□□ -0.92
VCAN-208ENST00000512590 EFCAB12Q6NXP0 572 aa9.28□□□□□ -0.92
VCAN-208ENST00000512590 MTHFD1LQ6UB35 978 aa9.28□□□□□ -0.92
VCAN-208ENST00000512590 TMEM237Q96Q45 408 aa9.28□□□□□ -0.92
VCAN-208ENST00000512590 MLPHQ9BV36 600 aaPredicted RBP9.28□□□□□ -0.92
VCAN-208ENST00000512590 RIC8BQ9NVN3 520 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms