RNA–Protein interactions for RNA: ENST00000512431.5

DDX41-215, Transcript of DEAD-box helicase 41, human

TSL 5

Gene DDX41, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX41-215	ENST00000512431	F11	P03951	625 aa		13.59	□□□□□ -0.23
DDX41-215	ENST00000512431	CSH1	P0DML2	217 aa		13.59	□□□□□ -0.23
DDX41-215	ENST00000512431	CSH2	P0DML3	217 aa		13.59	□□□□□ -0.23
DDX41-215	ENST00000512431	HAPLN1	P10915	354 aa	Predicted RBP	13.59	□□□□□ -0.23
DDX41-215	ENST00000512431	ENG	P17813	658 aa		13.59	□□□□□ -0.23
DDX41-215	ENST00000512431	BCKDHB	P21953	392 aa		13.59	□□□□□ -0.23
DDX41-215	ENST00000512431	NMT1	P30419	496 aa	Known RBP	13.59	□□□□□ -0.23
DDX41-215	ENST00000512431	FXR2	P51116	673 aa	Known RBP eCLIP	13.59	□□□□□ -0.23
DDX41-215	ENST00000512431	CDR1	P51861	262 aa		13.59	□□□□□ -0.23
DDX41-215	ENST00000512431	PDIA5	Q14554	519 aa		13.59	□□□□□ -0.23
DDX41-215	ENST00000512431	C2orf27A	Q580R0	203 aa		13.59	□□□□□ -0.23
DDX41-215	ENST00000512431	SPATA1	Q5VX52	437 aa		13.59	□□□□□ -0.23
DDX41-215	ENST00000512431	RASSF3	Q86WH2	238 aa		13.59	□□□□□ -0.23
DDX41-215	ENST00000512431	PROSER1	Q86XN7	944 aa		13.59	□□□□□ -0.23
DDX41-215	ENST00000512431	SYT12	Q8IV01	421 aa		13.59	□□□□□ -0.23
DDX41-215	ENST00000512431	DCP1B	Q8IZD4	617 aa	Known RBP	13.59	□□□□□ -0.23
DDX41-215	ENST00000512431	TMEM130	Q8N3G9	435 aa		13.59	□□□□□ -0.23
DDX41-215	ENST00000512431	NECAB1	Q8N987	351 aa		13.59	□□□□□ -0.23
DDX41-215	ENST00000512431	OSCP1	Q8WVF1	389 aa		13.59	□□□□□ -0.23
DDX41-215	ENST00000512431	FAM212A	Q96EL1	285 aa		13.59	□□□□□ -0.23
DDX41-215	ENST00000512431	RPF1	Q9H9Y2	349 aa	Known RBP	13.59	□□□□□ -0.23
DDX41-215	ENST00000512431	ABI2	Q9NYB9	513 aa	Predicted RBP	13.59	□□□□□ -0.23
DDX41-215	ENST00000512431	MAGED2	Q9UNF1	606 aa	Predicted RBP	13.59	□□□□□ -0.23
DDX41-215	ENST00000512431	EIF4E1B	A6NMX2	242 aa	Known RBP	13.58	□□□□□ -0.24
DDX41-215	ENST00000512431	UPK3BL1	B0FP48	263 aa		13.58	□□□□□ -0.24
DDX41-215	ENST00000512431	UPK3BL2	E5RIL1	263 aa		13.58	□□□□□ -0.24
DDX41-215	ENST00000512431		E9PMD0	336 aa		13.58	□□□□□ -0.24
DDX41-215	ENST00000512431		H0YCG3	227 aa		13.58	□□□□□ -0.24
DDX41-215	ENST00000512431	TNFRSF10B	O14763	440 aa		13.58	□□□□□ -0.24
DDX41-215	ENST00000512431	CYP11A1	P05108	521 aa		13.58	□□□□□ -0.24
DDX41-215	ENST00000512431	GUCY2F	P51841	1108 aa		13.58	□□□□□ -0.24
DDX41-215	ENST00000512431	SEC13	P55735	322 aa		13.58	□□□□□ -0.24
DDX41-215	ENST00000512431	FAM160A1	Q05DH4	1040 aa		13.58	□□□□□ -0.24
DDX41-215	ENST00000512431	BYSL	Q13895	437 aa	Known RBP	13.58	□□□□□ -0.24
DDX41-215	ENST00000512431	KRT79	Q5XKE5	535 aa		13.58	□□□□□ -0.24
DDX41-215	ENST00000512431	NAIF1	Q69YI7	327 aa	Predicted RBP	13.58	□□□□□ -0.24
DDX41-215	ENST00000512431	RINT1	Q6NUQ1	792 aa		13.58	□□□□□ -0.24
DDX41-215	ENST00000512431	C19orf48	Q6RUI8	117 aa		13.58	□□□□□ -0.24
DDX41-215	ENST00000512431	TMEM150A	Q86TG1	271 aa		13.58	□□□□□ -0.24
DDX41-215	ENST00000512431	CD302	Q8IX05	232 aa		13.58	□□□□□ -0.24
DDX41-215	ENST00000512431	SPIRE2	Q8WWL2	714 aa		13.58	□□□□□ -0.24
DDX41-215	ENST00000512431	EZH1	Q92800	747 aa	Predicted RBP	13.58	□□□□□ -0.24
DDX41-215	ENST00000512431	TRPC7	Q9HCX4	862 aa		13.58	□□□□□ -0.24
DDX41-215	ENST00000512431	UXT	Q9UBK9	157 aa	Predicted RBP	13.58	□□□□□ -0.24
DDX41-215	ENST00000512431	PCDHB5	Q9Y5E4	795 aa		13.58	□□□□□ -0.24
DDX41-215	ENST00000512431	MSANTD3-TMEFF1	A0A0A6YYJ0	341 aa		13.57	□□□□□ -0.24
DDX41-215	ENST00000512431	FAM221B	A6H8Z2	402 aa		13.57	□□□□□ -0.24
DDX41-215	ENST00000512431	CYB561D2	O14569	222 aa		13.57	□□□□□ -0.24
DDX41-215	ENST00000512431	PPEF2	O14830	753 aa		13.57	□□□□□ -0.24
DDX41-215	ENST00000512431	CFI	P05156	583 aa		13.57	□□□□□ -0.24
DDX41-215	ENST00000512431	CKM	P06732	381 aa		13.57	□□□□□ -0.24
DDX41-215	ENST00000512431	USP17L7	P0C7H9	530 aa		13.57	□□□□□ -0.24
DDX41-215	ENST00000512431	MAPT	P10636	758 aa	Known RBP	13.57	□□□□□ -0.24
DDX41-215	ENST00000512431	PLS3	P13797	630 aa		13.57	□□□□□ -0.24
DDX41-215	ENST00000512431	HMGA1	P17096	107 aa	Known RBP	13.57	□□□□□ -0.24
DDX41-215	ENST00000512431	TNFSF9	P41273	254 aa		13.57	□□□□□ -0.24
DDX41-215	ENST00000512431	LIG4	P49917	911 aa		13.57	□□□□□ -0.24
DDX41-215	ENST00000512431	SEMA3B	Q13214	749 aa		13.57	□□□□□ -0.24
DDX41-215	ENST00000512431	HNRNPD	Q14103	355 aa	Known RBP	13.57	□□□□□ -0.24
DDX41-215	ENST00000512431	CRY1	Q16526	586 aa		13.57	□□□□□ -0.24
DDX41-215	ENST00000512431	ZNF423	Q2M1K9	1284 aa		13.57	□□□□□ -0.24
DDX41-215	ENST00000512431	TTC38	Q5R3I4	469 aa		13.57	□□□□□ -0.24
DDX41-215	ENST00000512431	C9orf57	Q5W0N0	161 aa		13.57	□□□□□ -0.24
DDX41-215	ENST00000512431	C1orf186	Q6ZWK4	172 aa		13.57	□□□□□ -0.24
DDX41-215	ENST00000512431	ARMCX6	Q7L4S7	300 aa		13.57	□□□□□ -0.24
DDX41-215	ENST00000512431	PDZD3	Q86UT5	571 aa		13.57	□□□□□ -0.24
DDX41-215	ENST00000512431	TMEFF1	Q8IYR6	380 aa		13.57	□□□□□ -0.24
DDX41-215	ENST00000512431	CHCHD4	Q8N4Q1	142 aa		13.57	□□□□□ -0.24
DDX41-215	ENST00000512431	TMEM161B	Q8NDZ6	487 aa		13.57	□□□□□ -0.24
DDX41-215	ENST00000512431	NSUN7	Q8NE18	718 aa	Known RBP	13.57	□□□□□ -0.24
DDX41-215	ENST00000512431	MDGA1	Q8NFP4	955 aa		13.57	□□□□□ -0.24
DDX41-215	ENST00000512431	CEP76	Q8TAP6	659 aa		13.57	□□□□□ -0.24
DDX41-215	ENST00000512431	USP33	Q8TEY7	942 aa		13.57	□□□□□ -0.24
DDX41-215	ENST00000512431	GTF3C6	Q969F1	213 aa		13.57	□□□□□ -0.24
DDX41-215	ENST00000512431	RUSC1	Q9BVN2	902 aa		13.57	□□□□□ -0.24
DDX41-215	ENST00000512431	GTPBP2	Q9BX10	602 aa	Known RBP	13.57	□□□□□ -0.24
DDX41-215	ENST00000512431	TMEM206	Q9H813	350 aa		13.57	□□□□□ -0.24
DDX41-215	ENST00000512431	POLM	Q9NP87	494 aa	Predicted RBP	13.57	□□□□□ -0.24
DDX41-215	ENST00000512431	BCCIP	Q9P287	314 aa	Known RBP eCLIP	13.57	□□□□□ -0.24
DDX41-215	ENST00000512431	MMP17	Q9ULZ9	603 aa		13.57	□□□□□ -0.24
DDX41-215	ENST00000512431	GPSM3	Q9Y4H4	160 aa		13.57	□□□□□ -0.24
DDX41-215	ENST00000512431	WNT6	Q9Y6F9	365 aa		13.57	□□□□□ -0.24
DDX41-215	ENST00000512431	TRAV19	A0A0A6YYK7	116 aa		13.56	□□□□□ -0.24
DDX41-215	ENST00000512431	OPHN1	O60890	802 aa		13.56	□□□□□ -0.24
DDX41-215	ENST00000512431	PRPF40A	O75400	957 aa	Known RBP	13.56	□□□□□ -0.24
DDX41-215	ENST00000512431	NFATC1	O95644	943 aa		13.56	□□□□□ -0.24
DDX41-215	ENST00000512431	GUCY2C	P25092	1073 aa		13.56	□□□□□ -0.24
DDX41-215	ENST00000512431	MRPS21	P82921	87 aa	Known RBP	13.56	□□□□□ -0.24
DDX41-215	ENST00000512431	GUCY1B3	Q02153	619 aa		13.56	□□□□□ -0.24
DDX41-215	ENST00000512431	GFPT1	Q06210	699 aa	Predicted RBP	13.56	□□□□□ -0.24
DDX41-215	ENST00000512431	MAPK7	Q13164	816 aa		13.56	□□□□□ -0.24
DDX41-215	ENST00000512431	GNL2	Q13823	731 aa	Known RBP	13.56	□□□□□ -0.24
DDX41-215	ENST00000512431	ENOX2	Q16206	610 aa	Known RBP	13.56	□□□□□ -0.24
DDX41-215	ENST00000512431	EML3	Q32P44	896 aa		13.56	□□□□□ -0.24
DDX41-215	ENST00000512431	SOWAHC	Q53LP3	525 aa	Predicted RBP	13.56	□□□□□ -0.24
DDX41-215	ENST00000512431	SPDYC	Q5MJ68	293 aa		13.56	□□□□□ -0.24
DDX41-215	ENST00000512431	LYSMD4	Q5XG99	296 aa		13.56	□□□□□ -0.24
DDX41-215	ENST00000512431	JADE1	Q6IE81	842 aa		13.56	□□□□□ -0.24
DDX41-215	ENST00000512431	SLC23A3	Q6PIS1	610 aa		13.56	□□□□□ -0.24
DDX41-215	ENST00000512431	PIP4P1	Q86T03	277 aa		13.56	□□□□□ -0.24

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