RNA–Protein interactions for RNA: ENST00000512193.5

NEK1-208, Transcript of NIMA related kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK1, Length 4,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-208ENST00000512193 MAGEB18Q96M61 343 aa8.41□□□□□ -1.06
NEK1-208ENST00000512193 SARS2Q9NP81 518 aaKnown RBP8.41□□□□□ -1.06
NEK1-208ENST00000512193 BATF3Q9NR55 127 aa8.41□□□□□ -1.06
NEK1-208ENST00000512193 ABCF3Q9NUQ8 709 aa8.41□□□□□ -1.06
NEK1-208ENST00000512193 PCDHA3Q9Y5H8 950 aa8.41□□□□□ -1.06
NEK1-208ENST00000512193 FRMPD4Q14CM0 1322 aa8.41□□□□□ -1.06
NEK1-208ENST00000512193 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.41□□□□□ -1.06
NEK1-208ENST00000512193 ARHGEF37A1IGU5 675 aa8.41□□□□□ -1.06
NEK1-208ENST00000512193 ASB14A6NK59 587 aa8.41□□□□□ -1.06
NEK1-208ENST00000512193 GSTA4O15217 222 aa8.41□□□□□ -1.06
NEK1-208ENST00000512193 TRAPPC3O43617 180 aa8.41□□□□□ -1.06
NEK1-208ENST00000512193 ZC3H11AO75152 810 aaKnown RBP eCLIP8.41□□□□□ -1.06
NEK1-208ENST00000512193 SPAG6O75602 509 aa8.41□□□□□ -1.06
NEK1-208ENST00000512193 SHBGP04278 402 aa8.41□□□□□ -1.06
NEK1-208ENST00000512193 VCAM1P19320 739 aa8.41□□□□□ -1.06
NEK1-208ENST00000512193 GCLCP48506 637 aaPredicted RBP8.41□□□□□ -1.06
NEK1-208ENST00000512193 USP10Q14694 798 aaKnown RBP8.41□□□□□ -1.06
NEK1-208ENST00000512193 STILQ15468 1287 aa8.41□□□□□ -1.06
NEK1-208ENST00000512193 TRIP10Q15642 601 aa8.41□□□□□ -1.06
NEK1-208ENST00000512193 IRF2BP2Q7Z5L9 587 aa8.41□□□□□ -1.06
NEK1-208ENST00000512193 PRPF39Q86UA1 669 aaKnown RBP8.41□□□□□ -1.06
NEK1-208ENST00000512193 LNX1Q8TBB1 728 aaPredicted RBP8.41□□□□□ -1.06
NEK1-208ENST00000512193 ZNF669Q96BR6 464 aaPredicted RBP8.41□□□□□ -1.06
NEK1-208ENST00000512193 ZBTB45Q96K62 511 aaPredicted RBP8.41□□□□□ -1.06
NEK1-208ENST00000512193 PAFAH2Q99487 392 aa8.41□□□□□ -1.06
NEK1-208ENST00000512193 PRMT7Q9NVM4 692 aaPredicted RBP8.41□□□□□ -1.06
NEK1-208ENST00000512193 L3MBTL1Q9Y468 752 aa8.41□□□□□ -1.06
NEK1-208ENST00000512193 ASTN1O14525 1302 aa8.41□□□□□ -1.06
NEK1-208ENST00000512193 ARHGAP23Q9P227 1491 aa8.41□□□□□ -1.06
NEK1-208ENST00000512193 ANKRD63C9JTQ0 380 aa8.41□□□□□ -1.06
NEK1-208ENST00000512193 CES2O00748 559 aa8.41□□□□□ -1.06
NEK1-208ENST00000512193 FGRP09769 529 aa8.41□□□□□ -1.06
NEK1-208ENST00000512193 SUPT20HL2P0C7V6 817 aa8.41□□□□□ -1.06
NEK1-208ENST00000512193 SERPINB9P50453 376 aa8.41□□□□□ -1.06
NEK1-208ENST00000512193 PHEXP78562 749 aa8.41□□□□□ -1.06
NEK1-208ENST00000512193 DDR1Q08345 913 aa8.41□□□□□ -1.06
NEK1-208ENST00000512193 EFTUD2Q15029 972 aaKnown RBP eCLIP8.41□□□□□ -1.06
NEK1-208ENST00000512193 GOLGA7BQ2TAP0 167 aa8.41□□□□□ -1.06
NEK1-208ENST00000512193 MFSD7Q6UXD7 560 aa8.41□□□□□ -1.06
NEK1-208ENST00000512193 ZNF662Q6ZS27 426 aa8.41□□□□□ -1.06
NEK1-208ENST00000512193 EPS8L1Q8TE68 723 aa8.41□□□□□ -1.06
NEK1-208ENST00000512193 DCLK3Q9C098 648 aa8.41□□□□□ -1.06
NEK1-208ENST00000512193 DRC3Q9H069 523 aa8.41□□□□□ -1.06
NEK1-208ENST00000512193 KDM4CQ9H3R0 1056 aa8.41□□□□□ -1.06
NEK1-208ENST00000512193 DLGAP2Q9P1A6 1054 aa8.41□□□□□ -1.06
NEK1-208ENST00000512193 HACL1Q9UJ83 578 aa8.41□□□□□ -1.06
NEK1-208ENST00000512193 TSR3Q9UJK0 312 aaKnown RBP8.41□□□□□ -1.06
NEK1-208ENST00000512193 TLR2O60603 784 aa8.4□□□□□ -1.06
NEK1-208ENST00000512193 VIL1P09327 827 aaKnown RBP8.4□□□□□ -1.06
NEK1-208ENST00000512193 SSTR1P30872 391 aa8.4□□□□□ -1.06
NEK1-208ENST00000512193 NAMPTP43490 491 aa8.4□□□□□ -1.06
NEK1-208ENST00000512193 RAP1GAPP47736 663 aa8.4□□□□□ -1.06
NEK1-208ENST00000512193 TSPY1Q01534 308 aa8.4□□□□□ -1.06
NEK1-208ENST00000512193 TMED1Q13445 227 aa8.4□□□□□ -1.06
NEK1-208ENST00000512193 COBLL1Q53SF7 1204 aa8.4□□□□□ -1.06
NEK1-208ENST00000512193 TTC39BQ5VTQ0 682 aaPredicted RBP8.4□□□□□ -1.06
NEK1-208ENST00000512193 TMEM154Q6P9G4 183 aa8.4□□□□□ -1.06
NEK1-208ENST00000512193 MTDHQ86UE4 582 aaKnown RBP8.4□□□□□ -1.06
NEK1-208ENST00000512193 APPL2Q8NEU8 664 aa8.4□□□□□ -1.06
NEK1-208ENST00000512193 EPAS1Q99814 870 aa8.4□□□□□ -1.06
NEK1-208ENST00000512193 PXMP2Q9NR77 195 aa8.4□□□□□ -1.06
NEK1-208ENST00000512193 CTNNAL1Q9UBT7 734 aa8.4□□□□□ -1.06
NEK1-208ENST00000512193 GRID1Q9ULK0 1009 aa8.4□□□□□ -1.06
NEK1-208ENST00000512193 PDE4DIPQ5VU43 2346 aa8.4□□□□□ -1.06
NEK1-208ENST00000512193 DCCP43146 1447 aa8.4□□□□□ -1.06
NEK1-208ENST00000512193 GAKO14976 1311 aa8.4□□□□□ -1.06
NEK1-208ENST00000512193 UBA6A0AVT1 1052 aaPredicted RBP8.4□□□□□ -1.06
NEK1-208ENST00000512193 C3orf70A6NLC5 250 aaPredicted RBP8.4□□□□□ -1.06
NEK1-208ENST00000512193 HBP1O60381 514 aa8.4□□□□□ -1.06
NEK1-208ENST00000512193 PECAM1P16284 738 aaPredicted RBP8.4□□□□□ -1.06
NEK1-208ENST00000512193 DEUP1Q05D60 604 aa8.4□□□□□ -1.06
NEK1-208ENST00000512193 RCN1Q15293 331 aa8.4□□□□□ -1.06
NEK1-208ENST00000512193 DNAL1Q4LDG9 190 aa8.4□□□□□ -1.06
NEK1-208ENST00000512193 LRRC23Q53EV4 343 aaPredicted RBP8.4□□□□□ -1.06
NEK1-208ENST00000512193 MTHFD1LQ6UB35 978 aa8.4□□□□□ -1.06
NEK1-208ENST00000512193 ACOT1Q86TX2 421 aa8.4□□□□□ -1.06
NEK1-208ENST00000512193 THEM5Q8N1Q8 247 aa8.4□□□□□ -1.06
NEK1-208ENST00000512193 CXorf38Q8TB03 319 aa8.4□□□□□ -1.06
NEK1-208ENST00000512193 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.4□□□□□ -1.06
NEK1-208ENST00000512193 TMA16Q96EY4 203 aaKnown RBP8.4□□□□□ -1.06
NEK1-208ENST00000512193 FAM84AQ96KN4 292 aa8.4□□□□□ -1.06
NEK1-208ENST00000512193 KCTD10Q9H3F6 313 aa8.4□□□□□ -1.06
NEK1-208ENST00000512193 TASP1Q9H6P5 420 aa8.4□□□□□ -1.06
NEK1-208ENST00000512193 PLEKHA5Q9HAU0 1116 aa8.4□□□□□ -1.06
NEK1-208ENST00000512193 KRT82Q9NSB4 513 aa8.4□□□□□ -1.06
NEK1-208ENST00000512193 RNF181Q9P0P0 153 aa8.4□□□□□ -1.06
NEK1-208ENST00000512193 SALL4Q9UJQ4 1053 aa8.4□□□□□ -1.06
NEK1-208ENST00000512193 SUFUQ9UMX1 484 aa8.4□□□□□ -1.06
NEK1-208ENST00000512193 TYW5A2RUC4 315 aaKnown RBP8.4□□□□□ -1.06
NEK1-208ENST00000512193 MAGEB2O15479 319 aa8.4□□□□□ -1.06
NEK1-208ENST00000512193 DGKIO75912 1065 aa8.4□□□□□ -1.06
NEK1-208ENST00000512193 IL18RAPO95256 599 aa8.4□□□□□ -1.06
NEK1-208ENST00000512193 TCN1P20061 433 aaPredicted RBP8.4□□□□□ -1.06
NEK1-208ENST00000512193 KCNA3P22001 575 aa8.4□□□□□ -1.06
NEK1-208ENST00000512193 HSD17B4P51659 736 aa8.4□□□□□ -1.06
NEK1-208ENST00000512193 BACE1P56817 501 aa8.4□□□□□ -1.06
NEK1-208ENST00000512193 MED21Q13503 144 aa8.4□□□□□ -1.06
NEK1-208ENST00000512193 CYTH1Q15438 398 aa8.4□□□□□ -1.06
NEK1-208ENST00000512193 ARSHQ5FYA8 562 aa8.4□□□□□ -1.06
NEK1-208ENST00000512193 NBPF12Q5TAG4 269 aaPredicted RBP8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms