RNA–Protein interactions for RNA: ENST00000512068.1

HTT-209, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-209ENST00000512068 CALB1P05937 261 aa8.59□□□□□ -1.03
HTT-209ENST00000512068 SELPP16109 830 aa8.59□□□□□ -1.03
HTT-209ENST00000512068 TCP1P17987 556 aaKnown RBP8.59□□□□□ -1.03
HTT-209ENST00000512068 ACO1P21399 889 aaKnown RBP8.59□□□□□ -1.03
HTT-209ENST00000512068 MLH1P40692 756 aa8.59□□□□□ -1.03
HTT-209ENST00000512068 RAP1GAPP47736 663 aa8.59□□□□□ -1.03
HTT-209ENST00000512068 C1QTNF8P60827 252 aa8.59□□□□□ -1.03
HTT-209ENST00000512068 LPIN1Q14693 890 aa8.59□□□□□ -1.03
HTT-209ENST00000512068 STILQ15468 1287 aa8.59□□□□□ -1.03
HTT-209ENST00000512068 PKN2Q16513 984 aaKnown RBP8.59□□□□□ -1.03
HTT-209ENST00000512068 WHAMMP3Q1A5X7 153 aa8.59□□□□□ -1.03
HTT-209ENST00000512068 CLEC16AQ2KHT3 1053 aa8.59□□□□□ -1.03
HTT-209ENST00000512068 NAA35Q5VZE5 725 aa8.59□□□□□ -1.03
HTT-209ENST00000512068 C9orf57Q5W0N0 161 aa8.59□□□□□ -1.03
HTT-209ENST00000512068 FAM43BQ6ZT52 329 aaPredicted RBP8.59□□□□□ -1.03
HTT-209ENST00000512068 LRRC8DQ7L1W4 858 aa8.59□□□□□ -1.03
HTT-209ENST00000512068 DAAM2Q86T65 1068 aa8.59□□□□□ -1.03
HTT-209ENST00000512068 ANKMY2Q8IV38 441 aa8.59□□□□□ -1.03
HTT-209ENST00000512068 PASD1Q8IV76 773 aa8.59□□□□□ -1.03
HTT-209ENST00000512068 MEIOBQ8N635 442 aa8.59□□□□□ -1.03
HTT-209ENST00000512068 SLC43A3Q8NBI5 491 aa8.59□□□□□ -1.03
HTT-209ENST00000512068 SMG8Q8ND04 991 aaKnown RBP8.59□□□□□ -1.03
HTT-209ENST00000512068 URGCPQ8TCY9 931 aa8.59□□□□□ -1.03
HTT-209ENST00000512068 C18orf25Q96B23 403 aaPredicted RBP8.59□□□□□ -1.03
HTT-209ENST00000512068 ADAM2Q99965 735 aa8.59□□□□□ -1.03
HTT-209ENST00000512068 NT5C1AQ9BXI3 368 aa8.59□□□□□ -1.03
HTT-209ENST00000512068 BCO2Q9BYV7 579 aa8.59□□□□□ -1.03
HTT-209ENST00000512068 ZNF518BQ9C0D4 1074 aa8.59□□□□□ -1.03
HTT-209ENST00000512068 MIS12Q9H081 205 aa8.59□□□□□ -1.03
HTT-209ENST00000512068 THAP2Q9H0W7 228 aa8.59□□□□□ -1.03
HTT-209ENST00000512068 XYLT2Q9H1B5 865 aa8.59□□□□□ -1.03
HTT-209ENST00000512068 SNX25Q9H3E2 840 aa8.59□□□□□ -1.03
HTT-209ENST00000512068 SMYD3Q9H7B4 428 aa8.59□□□□□ -1.03
HTT-209ENST00000512068 SYNCQ9H7C4 482 aa8.59□□□□□ -1.03
HTT-209ENST00000512068 RSAD1Q9HA92 442 aa8.59□□□□□ -1.03
HTT-209ENST00000512068 PAK6Q9NQU5 681 aaPredicted RBP8.59□□□□□ -1.03
HTT-209ENST00000512068 TUBGCP4Q9UGJ1 667 aa8.59□□□□□ -1.03
HTT-209ENST00000512068 CDC23Q9UJX2 597 aa8.59□□□□□ -1.03
HTT-209ENST00000512068 GTF3C4Q9UKN8 822 aa8.59□□□□□ -1.03
HTT-209ENST00000512068 AMFRQ9UKV5 643 aa8.59□□□□□ -1.03
HTT-209ENST00000512068 BARX2Q9UMQ3 279 aaPredicted RBP8.59□□□□□ -1.03
HTT-209ENST00000512068 NOVA2Q9UNW9 492 aaKnown RBP8.59□□□□□ -1.03
HTT-209ENST00000512068 CNTN6Q9UQ52 1028 aa8.59□□□□□ -1.03
HTT-209ENST00000512068 HYOU1Q9Y4L1 999 aa8.59□□□□□ -1.03
HTT-209ENST00000512068 SNX9Q9Y5X1 595 aa8.59□□□□□ -1.03
HTT-209ENST00000512068 SAR1BQ9Y6B6 198 aa8.59□□□□□ -1.03
HTT-209ENST00000512068 CAPN6Q9Y6Q1 641 aa8.59□□□□□ -1.03
HTT-209ENST00000512068 SCINQ9Y6U3 715 aa8.59□□□□□ -1.03
HTT-209ENST00000512068 DUSP10Q9Y6W6 482 aa8.59□□□□□ -1.03
HTT-209ENST00000512068 SCN1AP35498 2009 aa8.58□□□□□ -1.04
HTT-209ENST00000512068 ARHGEF37A1IGU5 675 aa8.58□□□□□ -1.04
HTT-209ENST00000512068 ENC1O14682 589 aa8.58□□□□□ -1.04
HTT-209ENST00000512068 KIF4AO95239 1232 aa8.58□□□□□ -1.04
HTT-209ENST00000512068 PARNO95453 639 aaKnown RBP8.58□□□□□ -1.04
HTT-209ENST00000512068 ABL1P00519 1130 aa8.58□□□□□ -1.04
HTT-209ENST00000512068 VDRP11473 427 aa8.58□□□□□ -1.04
HTT-209ENST00000512068 CHRNB2P17787 502 aa8.58□□□□□ -1.04
HTT-209ENST00000512068 BRD2P25440 801 aaKnown RBP8.58□□□□□ -1.04
HTT-209ENST00000512068 PAFAH1B1P43034 410 aa8.58□□□□□ -1.04
HTT-209ENST00000512068 SMCPP49901 116 aaPredicted RBP8.58□□□□□ -1.04
HTT-209ENST00000512068 SNX16P57768 344 aa8.58□□□□□ -1.04
HTT-209ENST00000512068 TUBB4BP68371 445 aa8.58□□□□□ -1.04
HTT-209ENST00000512068 MTFR1Q15390 333 aa8.58□□□□□ -1.04
HTT-209ENST00000512068 RPS6KA1Q15418 735 aa8.58□□□□□ -1.04
HTT-209ENST00000512068 CTC1Q2NKJ3 1217 aa8.58□□□□□ -1.04
HTT-209ENST00000512068 TRIM71Q2Q1W2 868 aaKnown RBP8.58□□□□□ -1.04
HTT-209ENST00000512068 PKDCCQ504Y2 493 aa8.58□□□□□ -1.04
HTT-209ENST00000512068 SGO2Q562F6 1265 aa8.58□□□□□ -1.04
HTT-209ENST00000512068 CCDC70Q6NSX1 233 aa8.58□□□□□ -1.04
HTT-209ENST00000512068 FBXO46Q6PJ61 603 aaPredicted RBP8.58□□□□□ -1.04
HTT-209ENST00000512068 ALKAL1Q6UXT8 129 aa8.58□□□□□ -1.04
HTT-209ENST00000512068 DPH6Q7L8W6 267 aa8.58□□□□□ -1.04
HTT-209ENST00000512068 PEX26Q7Z412 305 aa8.58□□□□□ -1.04
HTT-209ENST00000512068 HOMEZQ8IX15 550 aa8.58□□□□□ -1.04
HTT-209ENST00000512068 APPL2Q8NEU8 664 aa8.58□□□□□ -1.04
HTT-209ENST00000512068 OR6B3Q8NGW1 331 aa8.58□□□□□ -1.04
HTT-209ENST00000512068 SLC35G2Q8TBE7 412 aa8.58□□□□□ -1.04
HTT-209ENST00000512068 IPO4Q8TEX9 1081 aaKnown RBP8.58□□□□□ -1.04
HTT-209ENST00000512068 ZNF606Q8WXB4 792 aa8.58□□□□□ -1.04
HTT-209ENST00000512068 SEPT8Q92599 483 aa8.58□□□□□ -1.04
HTT-209ENST00000512068 APBB2Q92870 758 aa8.58□□□□□ -1.04
HTT-209ENST00000512068 TMEM176AQ96HP8 235 aa8.58□□□□□ -1.04
HTT-209ENST00000512068 HEXIM2Q96MH2 286 aaKnown RBP8.58□□□□□ -1.04
HTT-209ENST00000512068 GAD1Q99259 594 aa8.58□□□□□ -1.04
HTT-209ENST00000512068 SYT11Q9BT88 431 aa8.58□□□□□ -1.04
HTT-209ENST00000512068 SELENOOQ9BVL4 669 aa8.58□□□□□ -1.04
HTT-209ENST00000512068 NUP85Q9BW27 656 aa8.58□□□□□ -1.04
HTT-209ENST00000512068 ISCUQ9H1K1 167 aa8.58□□□□□ -1.04
HTT-209ENST00000512068 AGO3Q9H9G7 860 aaKnown RBP8.58□□□□□ -1.04
HTT-209ENST00000512068 L2HGDHQ9H9P8 463 aa8.58□□□□□ -1.04
HTT-209ENST00000512068 MRPL47Q9HD33 250 aaKnown RBP8.58□□□□□ -1.04
HTT-209ENST00000512068 ACP6Q9NPH0 428 aa8.58□□□□□ -1.04
HTT-209ENST00000512068 TAS2R14Q9NYV8 317 aa8.58□□□□□ -1.04
HTT-209ENST00000512068 ADAM22Q9P0K1 906 aa8.58□□□□□ -1.04
HTT-209ENST00000512068 UVRAGQ9P2Y5 699 aa8.58□□□□□ -1.04
HTT-209ENST00000512068 HESX1Q9UBX0 185 aa8.58□□□□□ -1.04
HTT-209ENST00000512068 CNOT8Q9UFF9 292 aaKnown RBP8.58□□□□□ -1.04
HTT-209ENST00000512068 LCMT1Q9UIC8 334 aa8.58□□□□□ -1.04
HTT-209ENST00000512068 OGDHLQ9ULD0 1010 aa8.58□□□□□ -1.04
HTT-209ENST00000512068 KIAA1257Q9ULG3 409 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms