RNA–Protein interactions for RNA: ENST00000511895.1

LINC01088-208, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 2 BASIC

Gene LINC01088, Length 795 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-208ENST00000511895 SRGAP1Q7Z6B7 1085 aa7.03□□□□□ -1.28
LINC01088-208ENST00000511895 FAM156AQ8NDB6 213 aa7.03□□□□□ -1.28
LINC01088-208ENST00000511895 OR6B3Q8NGW1 331 aa7.03□□□□□ -1.28
LINC01088-208ENST00000511895 FUBP1Q96AE4 644 aaKnown RBP7.03□□□□□ -1.28
LINC01088-208ENST00000511895 CCDC136Q96JN2 1154 aa7.03□□□□□ -1.28
LINC01088-208ENST00000511895 SLC46A1Q96NT5 459 aa7.03□□□□□ -1.28
LINC01088-208ENST00000511895 SORCS2Q96PQ0 1159 aa7.03□□□□□ -1.28
LINC01088-208ENST00000511895 MRIQ9BWK5 157 aa7.03□□□□□ -1.28
LINC01088-208ENST00000511895 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.03□□□□□ -1.28
LINC01088-208ENST00000511895 HESX1Q9UBX0 185 aa7.03□□□□□ -1.28
LINC01088-208ENST00000511895 MED16Q9Y2X0 877 aa7.03□□□□□ -1.28
LINC01088-208ENST00000511895 ADAMTS12P58397 1594 aa7.03□□□□□ -1.28
LINC01088-208ENST00000511895 A0A0B4J269 797 aa7.02□□□□□ -1.29
LINC01088-208ENST00000511895 GRID2IPA4D2P6 1211 aa7.02□□□□□ -1.29
LINC01088-208ENST00000511895 TPP1O14773 563 aa7.02□□□□□ -1.29
LINC01088-208ENST00000511895 FOXN1O15353 648 aa7.02□□□□□ -1.29
LINC01088-208ENST00000511895 TBC1D4O60343 1298 aa7.02□□□□□ -1.29
LINC01088-208ENST00000511895 SOAT2O75908 522 aa7.02□□□□□ -1.29
LINC01088-208ENST00000511895 HMGB1P09429 215 aaKnown RBP7.02□□□□□ -1.29
LINC01088-208ENST00000511895 KRT4P19013 534 aa7.02□□□□□ -1.29
LINC01088-208ENST00000511895 GCLCP48506 637 aaPredicted RBP7.02□□□□□ -1.29
LINC01088-208ENST00000511895 DPTQ07507 201 aa7.02□□□□□ -1.29
LINC01088-208ENST00000511895 TUBB3Q13509 450 aa7.02□□□□□ -1.29
LINC01088-208ENST00000511895 HLXQ14774 488 aaPredicted RBP7.02□□□□□ -1.29
LINC01088-208ENST00000511895 DARS2Q6PI48 645 aaKnown RBP7.02□□□□□ -1.29
LINC01088-208ENST00000511895 Q6ZPA2 131 aa7.02□□□□□ -1.29
LINC01088-208ENST00000511895 LDLRAD3Q86YD5 345 aa7.02□□□□□ -1.29
LINC01088-208ENST00000511895 FAM9AQ8IZU1 332 aaPredicted RBP7.02□□□□□ -1.29
LINC01088-208ENST00000511895 B3GALNT2Q8NCR0 500 aa7.02□□□□□ -1.29
LINC01088-208ENST00000511895 TOR1AIP2Q8NFQ8 470 aa7.02□□□□□ -1.29
LINC01088-208ENST00000511895 IL31RAQ8NI17 732 aa7.02□□□□□ -1.29
LINC01088-208ENST00000511895 SLC30A5Q8TAD4 765 aa7.02□□□□□ -1.29
LINC01088-208ENST00000511895 TIFAQ96CG3 184 aa7.02□□□□□ -1.29
LINC01088-208ENST00000511895 ATP6V0A4Q9HBG4 840 aa7.02□□□□□ -1.29
LINC01088-208ENST00000511895 TPCN1Q9ULQ1 816 aa7.02□□□□□ -1.29
LINC01088-208ENST00000511895 TMX2Q9Y320 296 aa7.02□□□□□ -1.29
LINC01088-208ENST00000511895 COL4A3Q01955 1670 aa7.01□□□□□ -1.29
LINC01088-208ENST00000511895 TRIAP1O43715 76 aa7.01□□□□□ -1.29
LINC01088-208ENST00000511895 PEX1O43933 1283 aa7.01□□□□□ -1.29
LINC01088-208ENST00000511895 GCP02774 474 aa7.01□□□□□ -1.29
LINC01088-208ENST00000511895 HMGA2P52926 109 aa7.01□□□□□ -1.29
LINC01088-208ENST00000511895 UCP3P55916 312 aa7.01□□□□□ -1.29
LINC01088-208ENST00000511895 TCF15Q12870 199 aa7.01□□□□□ -1.29
LINC01088-208ENST00000511895 MPP3Q13368 585 aa7.01□□□□□ -1.29
LINC01088-208ENST00000511895 LONRF3Q496Y0 759 aa7.01□□□□□ -1.29
LINC01088-208ENST00000511895 RNF220Q5VTB9 566 aa7.01□□□□□ -1.29
LINC01088-208ENST00000511895 LMBRD2Q68DH5 695 aaPredicted RBP7.01□□□□□ -1.29
LINC01088-208ENST00000511895 APOA5Q6Q788 366 aa7.01□□□□□ -1.29
LINC01088-208ENST00000511895 CHST15Q7LFX5 561 aaPredicted RBP7.01□□□□□ -1.29
LINC01088-208ENST00000511895 MPP5Q8N3R9 675 aa7.01□□□□□ -1.29
LINC01088-208ENST00000511895 KBTBD7Q8WVZ9 684 aa7.01□□□□□ -1.29
LINC01088-208ENST00000511895 LRTOMTQ8WZ04 291 aa7.01□□□□□ -1.29
LINC01088-208ENST00000511895 COQ10AQ96MF6 247 aa7.01□□□□□ -1.29
LINC01088-208ENST00000511895 HEPHQ9BQS7 1158 aa7.01□□□□□ -1.29
LINC01088-208ENST00000511895 TRIM54Q9BYV2 358 aa7.01□□□□□ -1.29
LINC01088-208ENST00000511895 C22orf23Q9BZE7 217 aa7.01□□□□□ -1.29
LINC01088-208ENST00000511895 KCTD5Q9NXV2 234 aa7.01□□□□□ -1.29
LINC01088-208ENST00000511895 XPR1Q9UBH6 696 aa7.01□□□□□ -1.29
LINC01088-208ENST00000511895 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.01□□□□□ -1.29
LINC01088-208ENST00000511895 ABCA5Q8WWZ7 1642 aa7.01□□□□□ -1.29
LINC01088-208ENST00000511895 A0A087X1B8 175 aa7□□□□□ -1.29
LINC01088-208ENST00000511895 BTN3A1O00481 513 aa7□□□□□ -1.29
LINC01088-208ENST00000511895 MGEA5O60502 916 aa7□□□□□ -1.29
LINC01088-208ENST00000511895 ZBED1O96006 694 aa7□□□□□ -1.29
LINC01088-208ENST00000511895 THP07101 528 aa7□□□□□ -1.29
LINC01088-208ENST00000511895 BRAFP15056 766 aa7□□□□□ -1.29
LINC01088-208ENST00000511895 PPP3CBP16298 524 aa7□□□□□ -1.29
LINC01088-208ENST00000511895 CD6P30203 668 aa7□□□□□ -1.29
LINC01088-208ENST00000511895 FAM193AP78312 1265 aa7□□□□□ -1.29
LINC01088-208ENST00000511895 BOP1Q14137 746 aaKnown RBP7□□□□□ -1.29
LINC01088-208ENST00000511895 IQCB1Q15051 598 aa7□□□□□ -1.29
LINC01088-208ENST00000511895 HSP90AB2PQ58FF8 381 aa7□□□□□ -1.29
LINC01088-208ENST00000511895 Q6ZNX1 250 aa7□□□□□ -1.29
LINC01088-208ENST00000511895 TSHZ1Q6ZSZ6 1077 aa7□□□□□ -1.29
LINC01088-208ENST00000511895 TMPRSS9Q7Z410 1059 aa7□□□□□ -1.29
LINC01088-208ENST00000511895 DGKHQ86XP1 1220 aa7□□□□□ -1.29
LINC01088-208ENST00000511895 LNX2Q8N448 690 aa7□□□□□ -1.29
LINC01088-208ENST00000511895 DNAJC5GQ8N7S2 189 aa7□□□□□ -1.29
LINC01088-208ENST00000511895 LINC00476Q8WZB0 136 aa7□□□□□ -1.29
LINC01088-208ENST00000511895 LPIN2Q92539 896 aa7□□□□□ -1.29
LINC01088-208ENST00000511895 CHFRQ96EP1 664 aa7□□□□□ -1.29
LINC01088-208ENST00000511895 C8orf48Q96LL4 319 aa7□□□□□ -1.29
LINC01088-208ENST00000511895 MOGAT1Q96PD6 335 aa7□□□□□ -1.29
LINC01088-208ENST00000511895 SPATA5L1Q9BVQ7 753 aa7□□□□□ -1.29
LINC01088-208ENST00000511895 TPSD1Q9BZJ3 242 aa7□□□□□ -1.29
LINC01088-208ENST00000511895 SYBUQ9NX95 663 aa7□□□□□ -1.29
LINC01088-208ENST00000511895 PACSIN3Q9UKS6 424 aa7□□□□□ -1.29
LINC01088-208ENST00000511895 USP19O94966 1318 aa7□□□□□ -1.29
LINC01088-208ENST00000511895 ARID4BQ4LE39 1312 aaPredicted RBP7□□□□□ -1.29
LINC01088-208ENST00000511895 SPATA31A3Q5VYP0 1347 aa7□□□□□ -1.29
LINC01088-208ENST00000511895 WDR33Q9C0J8 1336 aaKnown RBP7□□□□□ -1.29
LINC01088-208ENST00000511895 CUL7Q14999 1698 aa7□□□□□ -1.29
LINC01088-208ENST00000511895 GOLIM4O00461 696 aa6.99□□□□□ -1.29
LINC01088-208ENST00000511895 YY2O15391 372 aa6.99□□□□□ -1.29
LINC01088-208ENST00000511895 RHOBTB3O94955 611 aa6.99□□□□□ -1.29
LINC01088-208ENST00000511895 SRGNP10124 158 aa6.99□□□□□ -1.29
LINC01088-208ENST00000511895 TGM1P22735 817 aa6.99□□□□□ -1.29
LINC01088-208ENST00000511895 SLC11A2P49281 568 aa6.99□□□□□ -1.29
LINC01088-208ENST00000511895 TOB1P50616 345 aaPredicted RBP6.99□□□□□ -1.29
LINC01088-208ENST00000511895 SEC24CP53992 1094 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms