RNA–Protein interactions for RNA: ENST00000511586.5

PDLIM5-215, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-215ENST00000511586 ELMO3Q96BJ8 720 aa7.64□□□□□ -1.19
PDLIM5-215ENST00000511586 FUBP3Q96I24 572 aaKnown RBP eCLIP7.64□□□□□ -1.19
PDLIM5-215ENST00000511586 FAXDC2Q96IV6 333 aa7.64□□□□□ -1.19
PDLIM5-215ENST00000511586 MED15Q96RN5 788 aa7.64□□□□□ -1.19
PDLIM5-215ENST00000511586 PKMYT1Q99640 499 aa7.64□□□□□ -1.19
PDLIM5-215ENST00000511586 SEPT5Q99719 369 aaPredicted RBP7.64□□□□□ -1.19
PDLIM5-215ENST00000511586 CORO1BQ9BR76 489 aa7.64□□□□□ -1.19
PDLIM5-215ENST00000511586 CRISPLD1Q9H336 500 aa7.64□□□□□ -1.19
PDLIM5-215ENST00000511586 SMYD3Q9H7B4 428 aa7.64□□□□□ -1.19
PDLIM5-215ENST00000511586 CYP3A43Q9HB55 503 aa7.64□□□□□ -1.19
PDLIM5-215ENST00000511586 APOBEC3GQ9HC16 384 aaKnown RBP7.64□□□□□ -1.19
PDLIM5-215ENST00000511586 ABCB6Q9NP58 842 aa7.64□□□□□ -1.19
PDLIM5-215ENST00000511586 CD320Q9NPF0 282 aa7.64□□□□□ -1.19
PDLIM5-215ENST00000511586 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.64□□□□□ -1.19
PDLIM5-215ENST00000511586 TMLHEQ9NVH6 421 aa7.64□□□□□ -1.19
PDLIM5-215ENST00000511586 HCFC1R1Q9NWW0 138 aa7.64□□□□□ -1.19
PDLIM5-215ENST00000511586 CEP72Q9P209 647 aa7.64□□□□□ -1.19
PDLIM5-215ENST00000511586 DNMT3BQ9UBC3 853 aaKnown RBP7.64□□□□□ -1.19
PDLIM5-215ENST00000511586 COQ4Q9Y3A0 265 aa7.64□□□□□ -1.19
PDLIM5-215ENST00000511586 ASB3Q9Y575 518 aa7.64□□□□□ -1.19
PDLIM5-215ENST00000511586 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.64□□□□□ -1.19
PDLIM5-215ENST00000511586 TCF20Q9UGU0 1960 aaKnown RBP7.63□□□□□ -1.19
PDLIM5-215ENST00000511586 MTCL1Q9Y4B5 1905 aaKnown RBP7.63□□□□□ -1.19
PDLIM5-215ENST00000511586 MYBPHLA2RUH7 354 aa7.63□□□□□ -1.19
PDLIM5-215ENST00000511586 C2CD4DB7Z1M9 353 aa7.63□□□□□ -1.19
PDLIM5-215ENST00000511586 P4HA2O15460 535 aa7.63□□□□□ -1.19
PDLIM5-215ENST00000511586 ATP2C2O75185 946 aa7.63□□□□□ -1.19
PDLIM5-215ENST00000511586 SOAT2O75908 522 aa7.63□□□□□ -1.19
PDLIM5-215ENST00000511586 RHOP08100 348 aa7.63□□□□□ -1.19
PDLIM5-215ENST00000511586 TRIM21P19474 475 aaKnown RBP7.63□□□□□ -1.19
PDLIM5-215ENST00000511586 CYP2F1P24903 491 aa7.63□□□□□ -1.19
PDLIM5-215ENST00000511586 GBP2P32456 591 aaPredicted RBP7.63□□□□□ -1.19
PDLIM5-215ENST00000511586 ASPAP45381 313 aa7.63□□□□□ -1.19
PDLIM5-215ENST00000511586 RAP1GAPP47736 663 aa7.63□□□□□ -1.19
PDLIM5-215ENST00000511586 FMO5P49326 533 aa7.63□□□□□ -1.19
PDLIM5-215ENST00000511586 CDR1P51861 262 aa7.63□□□□□ -1.19
PDLIM5-215ENST00000511586 PSMC1P62191 440 aaKnown RBP7.63□□□□□ -1.19
PDLIM5-215ENST00000511586 RPL10AP62906 217 aaKnown RBP7.63□□□□□ -1.19
PDLIM5-215ENST00000511586 CYP27A1Q02318 531 aa7.63□□□□□ -1.19
PDLIM5-215ENST00000511586 KCNH2Q12809 1159 aa7.63□□□□□ -1.19
PDLIM5-215ENST00000511586 VEPH1Q14D04 833 aa7.63□□□□□ -1.19
PDLIM5-215ENST00000511586 CFAP221Q4G0U5 840 aa7.63□□□□□ -1.19
PDLIM5-215ENST00000511586 CYP4A22Q5TCH4 519 aa7.63□□□□□ -1.19
PDLIM5-215ENST00000511586 PDZD4Q76G19 769 aaPredicted RBP7.63□□□□□ -1.19
PDLIM5-215ENST00000511586 GET4Q7L5D6 327 aaPredicted RBP7.63□□□□□ -1.19
PDLIM5-215ENST00000511586 ITIH5Q86UX2 942 aa7.63□□□□□ -1.19
PDLIM5-215ENST00000511586 UNC93AQ86WB7 457 aa7.63□□□□□ -1.19
PDLIM5-215ENST00000511586 RNF135Q8IUD6 432 aa7.63□□□□□ -1.19
PDLIM5-215ENST00000511586 FAM114A1Q8IWE2 563 aa7.63□□□□□ -1.19
PDLIM5-215ENST00000511586 ZDHHC14Q8IZN3 488 aa7.63□□□□□ -1.19
PDLIM5-215ENST00000511586 LEMD2Q8NC56 503 aa7.63□□□□□ -1.19
PDLIM5-215ENST00000511586 B3GALNT2Q8NCR0 500 aa7.63□□□□□ -1.19
PDLIM5-215ENST00000511586 ITFG1Q8TB96 612 aa7.63□□□□□ -1.19
PDLIM5-215ENST00000511586 MYCBPAPQ8TBZ2 947 aa7.63□□□□□ -1.19
PDLIM5-215ENST00000511586 FAM200AQ8TCP9 573 aa7.63□□□□□ -1.19
PDLIM5-215ENST00000511586 PSMG2Q969U7 264 aa7.63□□□□□ -1.19
PDLIM5-215ENST00000511586 TNIP3Q96KP6 325 aa7.63□□□□□ -1.19
PDLIM5-215ENST00000511586 CNOT6LQ96LI5 555 aaKnown RBP7.63□□□□□ -1.19
PDLIM5-215ENST00000511586 BCO2Q9BYV7 579 aa7.63□□□□□ -1.19
PDLIM5-215ENST00000511586 DNAI2Q9GZS0 605 aa7.63□□□□□ -1.19
PDLIM5-215ENST00000511586 NIF3L1Q9GZT8 377 aa7.63□□□□□ -1.19
PDLIM5-215ENST00000511586 SDCBP2Q9H190 292 aa7.63□□□□□ -1.19
PDLIM5-215ENST00000511586 THAP9Q9H5L6 903 aa7.63□□□□□ -1.19
PDLIM5-215ENST00000511586 CRTAC1Q9NQ79 661 aa7.63□□□□□ -1.19
PDLIM5-215ENST00000511586 AVENQ9NQS1 362 aaPredicted RBP7.63□□□□□ -1.19
PDLIM5-215ENST00000511586 ASAH2Q9NR71 780 aa7.63□□□□□ -1.19
PDLIM5-215ENST00000511586 ANO10Q9NW15 660 aa7.63□□□□□ -1.19
PDLIM5-215ENST00000511586 TMEM63CQ9P1W3 806 aa7.63□□□□□ -1.19
PDLIM5-215ENST00000511586 MAGEC2Q9UBF1 373 aaPredicted RBP7.63□□□□□ -1.19
PDLIM5-215ENST00000511586 ZFP37Q9Y6Q3 630 aaPredicted RBP7.63□□□□□ -1.19
PDLIM5-215ENST00000511586 VCANP13611 3396 aa7.62□□□□□ -1.19
PDLIM5-215ENST00000511586 LRRN2O75325 713 aa7.62□□□□□ -1.19
PDLIM5-215ENST00000511586 MICAL2O94851 1124 aa7.62□□□□□ -1.19
PDLIM5-215ENST00000511586 LETM1O95202 739 aaPredicted RBP7.62□□□□□ -1.19
PDLIM5-215ENST00000511586 FGF19O95750 216 aa7.62□□□□□ -1.19
PDLIM5-215ENST00000511586 AFPP02771 609 aaKnown RBP7.62□□□□□ -1.19
PDLIM5-215ENST00000511586 MAGEA11P43364 429 aa7.62□□□□□ -1.19
PDLIM5-215ENST00000511586 MTIF2P46199 727 aaKnown RBP7.62□□□□□ -1.19
PDLIM5-215ENST00000511586 NDST1P52848 882 aa7.62□□□□□ -1.19
PDLIM5-215ENST00000511586 EPHA5P54756 1037 aa7.62□□□□□ -1.19
PDLIM5-215ENST00000511586 INCA1Q0VD86 236 aa7.62□□□□□ -1.19
PDLIM5-215ENST00000511586 TAF12Q16514 161 aa7.62□□□□□ -1.19
PDLIM5-215ENST00000511586 STX1AQ16623 288 aa7.62□□□□□ -1.19
PDLIM5-215ENST00000511586 MDH1BQ5I0G3 518 aa7.62□□□□□ -1.19
PDLIM5-215ENST00000511586 VSTM1Q6UX27 236 aa7.62□□□□□ -1.19
PDLIM5-215ENST00000511586 DNAJB7Q7Z6W7 309 aaPredicted RBP7.62□□□□□ -1.19
PDLIM5-215ENST00000511586 ACOT1Q86TX2 421 aa7.62□□□□□ -1.19
PDLIM5-215ENST00000511586 IRF2BP1Q8IU81 584 aa7.62□□□□□ -1.19
PDLIM5-215ENST00000511586 HS6ST3Q8IZP7 471 aa7.62□□□□□ -1.19
PDLIM5-215ENST00000511586 CRYBG2Q8N1P7 616 aa7.62□□□□□ -1.19
PDLIM5-215ENST00000511586 TTC39CQ8N584 583 aa7.62□□□□□ -1.19
PDLIM5-215ENST00000511586 ENOX1Q8TC92 643 aaKnown RBP7.62□□□□□ -1.19
PDLIM5-215ENST00000511586 FGF13Q92913 245 aa7.62□□□□□ -1.19
PDLIM5-215ENST00000511586 TATDN2Q93075 761 aa7.62□□□□□ -1.19
PDLIM5-215ENST00000511586 MYLPFQ96A32 169 aa7.62□□□□□ -1.19
PDLIM5-215ENST00000511586 PCED1BQ96HM7 432 aa7.62□□□□□ -1.19
PDLIM5-215ENST00000511586 MYADMQ96S97 322 aa7.62□□□□□ -1.19
PDLIM5-215ENST00000511586 NT5C1AQ9BXI3 368 aa7.62□□□□□ -1.19
PDLIM5-215ENST00000511586 DNAJC25Q9H1X3 360 aa7.62□□□□□ -1.19
PDLIM5-215ENST00000511586 DPEP3Q9H4B8 488 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms