RNA–Protein interactions for RNA: ENST00000511333.5

MATR3-217, Transcript of matrin 3, humanhuman

TSL 5

Gene MATR3, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-217ENST00000511333 VPS53Q5VIR6 699 aa3.78□□□□□ -1.8
MATR3-217ENST00000511333 FOXP4Q8IVH2 680 aaPredicted RBP3.78□□□□□ -1.8
MATR3-217ENST00000511333 PSD4Q8NDX1 1056 aa3.78□□□□□ -1.8
MATR3-217ENST00000511333 KLHDC4Q8TBB5 520 aa3.78□□□□□ -1.8
MATR3-217ENST00000511333 CHAC2Q8WUX2 184 aa3.78□□□□□ -1.8
MATR3-217ENST00000511333 KAT5Q92993 513 aa3.78□□□□□ -1.8
MATR3-217ENST00000511333 REPS1Q96D71 796 aa3.78□□□□□ -1.8
MATR3-217ENST00000511333 C5orf34Q96MH7 638 aa3.78□□□□□ -1.8
MATR3-217ENST00000511333 VRK1Q99986 396 aaPredicted RBP3.78□□□□□ -1.8
MATR3-217ENST00000511333 PDGFCQ9NRA1 345 aa3.78□□□□□ -1.8
MATR3-217ENST00000511333 LY6G6EA0A0G2JKS1 128 aa3.77□□□□□ -1.81
MATR3-217ENST00000511333 ZNF213O14771 459 aa3.77□□□□□ -1.81
MATR3-217ENST00000511333 NDUFS2O75306 463 aa3.77□□□□□ -1.81
MATR3-217ENST00000511333 ITGALP20701 1170 aa3.77□□□□□ -1.81
MATR3-217ENST00000511333 LPOP22079 712 aaPredicted RBP3.77□□□□□ -1.81
MATR3-217ENST00000511333 CD6P30203 668 aa3.77□□□□□ -1.81
MATR3-217ENST00000511333 KRT71Q3SY84 523 aa3.77□□□□□ -1.81
MATR3-217ENST00000511333 PGM2L1Q6PCE3 622 aa3.77□□□□□ -1.81
MATR3-217ENST00000511333 WDR66Q8TBY9 1149 aa3.77□□□□□ -1.81
MATR3-217ENST00000511333 HDAC10Q969S8 669 aa3.77□□□□□ -1.81
MATR3-217ENST00000511333 FAM136AQ96C01 138 aa3.77□□□□□ -1.81
MATR3-217ENST00000511333 ZC3H10Q96K80 434 aaKnown RBP3.77□□□□□ -1.81
MATR3-217ENST00000511333 MACROD1Q9BQ69 325 aa3.77□□□□□ -1.81
MATR3-217ENST00000511333 BRD9Q9H8M2 597 aa3.77□□□□□ -1.81
MATR3-217ENST00000511333 ZNF277Q9NRM2 450 aaPredicted RBP3.77□□□□□ -1.81
MATR3-217ENST00000511333 LIMCH1Q9UPQ0 1083 aa3.77□□□□□ -1.81
MATR3-217ENST00000511333 SPATA31A3Q5VYP0 1347 aa3.76□□□□□ -1.81
MATR3-217ENST00000511333 H0YIZ8 118 aa3.76□□□□□ -1.81
MATR3-217ENST00000511333 BCAR3O75815 825 aa3.76□□□□□ -1.81
MATR3-217ENST00000511333 KIF20AO95235 890 aa3.76□□□□□ -1.81
MATR3-217ENST00000511333 GJB1P08034 283 aa3.76□□□□□ -1.81
MATR3-217ENST00000511333 ENGP17813 658 aa3.76□□□□□ -1.81
MATR3-217ENST00000511333 PCSK6P29122 969 aa3.76□□□□□ -1.81
MATR3-217ENST00000511333 CNGA1P29973 690 aa3.76□□□□□ -1.81
MATR3-217ENST00000511333 ZNF135P52742 658 aaPredicted RBP3.76□□□□□ -1.81
MATR3-217ENST00000511333 PDE1AP54750 535 aa3.76□□□□□ -1.81
MATR3-217ENST00000511333 EEFSECP57772 596 aaKnown RBP3.76□□□□□ -1.81
MATR3-217ENST00000511333 TLE1Q04724 770 aa3.76□□□□□ -1.81
MATR3-217ENST00000511333 C3orf36Q3SXR2 165 aa3.76□□□□□ -1.81
MATR3-217ENST00000511333 KHDC1Q4VXA5 237 aaKnown RBP3.76□□□□□ -1.81
MATR3-217ENST00000511333 CCDC93Q567U6 631 aa3.76□□□□□ -1.81
MATR3-217ENST00000511333 MIS18BP1Q6P0N0 1132 aa3.76□□□□□ -1.81
MATR3-217ENST00000511333 CHSY1Q86X52 802 aa3.76□□□□□ -1.81
MATR3-217ENST00000511333 AFAP1L2Q8N4X5 818 aa3.76□□□□□ -1.81
MATR3-217ENST00000511333 PRSS3P2Q8NHM4 247 aa3.76□□□□□ -1.81
MATR3-217ENST00000511333 ATRIPQ8WXE1 791 aa3.76□□□□□ -1.81
MATR3-217ENST00000511333 OSBPL9Q96SU4 736 aa3.76□□□□□ -1.81
MATR3-217ENST00000511333 SERHLQ9NQF3 203 aa3.76□□□□□ -1.81
MATR3-217ENST00000511333 TUBD1Q9UJT1 453 aa3.76□□□□□ -1.81
MATR3-217ENST00000511333 RAD54BQ9Y620 910 aa3.76□□□□□ -1.81
MATR3-217ENST00000511333 NOTCH2Q04721 2471 aa3.75□□□□□ -1.81
MATR3-217ENST00000511333 CCDC154A6NI56 674 aa3.75□□□□□ -1.81
MATR3-217ENST00000511333 F2RL2O00254 374 aa3.75□□□□□ -1.81
MATR3-217ENST00000511333 NXPH3O95157 252 aa3.75□□□□□ -1.81
MATR3-217ENST00000511333 EYA4O95677 639 aa3.75□□□□□ -1.81
MATR3-217ENST00000511333 FGBP02675 491 aa3.75□□□□□ -1.81
MATR3-217ENST00000511333 C5AR1P21730 350 aa3.75□□□□□ -1.81
MATR3-217ENST00000511333 SCP2P22307 547 aa3.75□□□□□ -1.81
MATR3-217ENST00000511333 SMARCA1P28370 1054 aa3.75□□□□□ -1.81
MATR3-217ENST00000511333 LIPAP38571 399 aa3.75□□□□□ -1.81
MATR3-217ENST00000511333 WASP42768 502 aa3.75□□□□□ -1.81
MATR3-217ENST00000511333 CLCN2P51788 898 aa3.75□□□□□ -1.81
MATR3-217ENST00000511333 SLC16A1P53985 500 aa3.75□□□□□ -1.81
MATR3-217ENST00000511333 ERVK-21P61565 698 aa3.75□□□□□ -1.81
MATR3-217ENST00000511333 CYP4F2P78329 520 aa3.75□□□□□ -1.81
MATR3-217ENST00000511333 RAB39AQ14964 217 aa3.75□□□□□ -1.81
MATR3-217ENST00000511333 Q4G0T1 1027 aa3.75□□□□□ -1.81
MATR3-217ENST00000511333 CATSPERGQ6ZRH7 1159 aa3.75□□□□□ -1.81
MATR3-217ENST00000511333 NANOGP1Q8N7R0 232 aa3.75□□□□□ -1.81
MATR3-217ENST00000511333 TBC1D5Q92609 795 aa3.75□□□□□ -1.81
MATR3-217ENST00000511333 JADE3Q92613 823 aa3.75□□□□□ -1.81
MATR3-217ENST00000511333 SCAMP4Q969E2 229 aa3.75□□□□□ -1.81
MATR3-217ENST00000511333 COQ8BQ96D53 544 aa3.75□□□□□ -1.81
MATR3-217ENST00000511333 MRGPRX4Q96LA9 322 aa3.75□□□□□ -1.81
MATR3-217ENST00000511333 SLKQ9H2G2 1235 aaPredicted RBP3.75□□□□□ -1.81
MATR3-217ENST00000511333 HIPK2Q9H2X6 1198 aa3.75□□□□□ -1.81
MATR3-217ENST00000511333 TRNAU1APQ9NX07 287 aaKnown RBP3.75□□□□□ -1.81
MATR3-217ENST00000511333 ETAA1Q9NY74 926 aa3.75□□□□□ -1.81
MATR3-217ENST00000511333 DLL3Q9NYJ7 618 aa3.75□□□□□ -1.81
MATR3-217ENST00000511333 CCNL1Q9UK58 526 aaPredicted RBP3.75□□□□□ -1.81
MATR3-217ENST00000511333 AGAP1Q9UPQ3 857 aa3.75□□□□□ -1.81
MATR3-217ENST00000511333 ENPP3O14638 875 aa3.74□□□□□ -1.81
MATR3-217ENST00000511333 GPR39O43194 453 aa3.74□□□□□ -1.81
MATR3-217ENST00000511333 HTRA2O43464 458 aaPredicted RBP3.74□□□□□ -1.81
MATR3-217ENST00000511333 ANXA1P04083 346 aa3.74□□□□□ -1.81
MATR3-217ENST00000511333 GNAI3P08754 354 aa3.74□□□□□ -1.81
MATR3-217ENST00000511333 CPEP16870 476 aa3.74□□□□□ -1.81
MATR3-217ENST00000511333 HILS1P60008 231 aa3.74□□□□□ -1.81
MATR3-217ENST00000511333 GNAI1P63096 354 aa3.74□□□□□ -1.81
MATR3-217ENST00000511333 SP2Q02086 613 aa3.74□□□□□ -1.81
MATR3-217ENST00000511333 RHDQ02161 417 aa3.74□□□□□ -1.81
MATR3-217ENST00000511333 KIF23Q02241 960 aaPredicted RBP3.74□□□□□ -1.81
MATR3-217ENST00000511333 KLF1Q13351 362 aaPredicted RBP3.74□□□□□ -1.81
MATR3-217ENST00000511333 SNAPC2Q13487 334 aa3.74□□□□□ -1.81
MATR3-217ENST00000511333 HABP2Q14520 560 aaPredicted RBP3.74□□□□□ -1.81
MATR3-217ENST00000511333 FNDC1Q4ZHG4 1894 aaPredicted RBP3.74□□□□□ -1.81
MATR3-217ENST00000511333 AARS2Q5JTZ9 985 aaKnown RBP3.74□□□□□ -1.81
MATR3-217ENST00000511333 TREML2Q5T2D2 321 aa3.74□□□□□ -1.81
MATR3-217ENST00000511333 SPATS2Q86XZ4 545 aaKnown RBP3.74□□□□□ -1.81
MATR3-217ENST00000511333 DCP1BQ8IZD4 617 aaKnown RBP3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms