RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 PSMC1P62191 440 aaKnown RBP13.72□□□□□ -0.21
COL6A6-203ENST00000511332 TPM4P67936 248 aa13.72□□□□□ -0.21
COL6A6-203ENST00000511332 CUL2Q13617 745 aa13.72□□□□□ -0.21
COL6A6-203ENST00000511332 NCAPHQ15003 741 aa13.72□□□□□ -0.21
COL6A6-203ENST00000511332 MIIPQ5JXC2 388 aa13.72□□□□□ -0.21
COL6A6-203ENST00000511332 PTCRAQ6ISU1 281 aaPredicted RBP13.72□□□□□ -0.21
COL6A6-203ENST00000511332 TMC5Q6UXY8 1006 aa13.72□□□□□ -0.21
COL6A6-203ENST00000511332 SPATA2LQ8IUW3 424 aaPredicted RBP13.72□□□□□ -0.21
COL6A6-203ENST00000511332 DHX40Q8IX18 779 aaKnown RBP13.72□□□□□ -0.21
COL6A6-203ENST00000511332 ELMOD1Q8N336 334 aa13.72□□□□□ -0.21
COL6A6-203ENST00000511332 B3GALNT2Q8NCR0 500 aa13.72□□□□□ -0.21
COL6A6-203ENST00000511332 FUBP3Q96I24 572 aaKnown RBP eCLIP13.72□□□□□ -0.21
COL6A6-203ENST00000511332 FAM81BQ96LP2 452 aa13.72□□□□□ -0.21
COL6A6-203ENST00000511332 PKMYT1Q99640 499 aa13.72□□□□□ -0.21
COL6A6-203ENST00000511332 SDCBP2Q9H190 292 aa13.72□□□□□ -0.21
COL6A6-203ENST00000511332 S1PR5Q9H228 398 aa13.72□□□□□ -0.21
COL6A6-203ENST00000511332 USP15Q9Y4E8 981 aaPredicted RBP13.72□□□□□ -0.21
COL6A6-203ENST00000511332 YIPF1Q9Y548 306 aa13.72□□□□□ -0.21
COL6A6-203ENST00000511332 ZNF638Q14966 1978 aaKnown RBP13.71□□□□□ -0.21
COL6A6-203ENST00000511332 TCF20Q9UGU0 1960 aaKnown RBP13.71□□□□□ -0.21
COL6A6-203ENST00000511332 SPTBN5Q9NRC6 3674 aaKnown RBP13.71□□□□□ -0.21
COL6A6-203ENST00000511332 HCRTO43612 131 aa13.71□□□□□ -0.21
COL6A6-203ENST00000511332 LRRN2O75325 713 aa13.71□□□□□ -0.21
COL6A6-203ENST00000511332 RFPL2O75678 378 aa13.71□□□□□ -0.21
COL6A6-203ENST00000511332 SEC24AO95486 1093 aa13.71□□□□□ -0.21
COL6A6-203ENST00000511332 VNN2O95498 520 aa13.71□□□□□ -0.21
COL6A6-203ENST00000511332 PDGFRBP09619 1106 aa13.71□□□□□ -0.21
COL6A6-203ENST00000511332 WEE2P0C1S8 567 aa13.71□□□□□ -0.21
COL6A6-203ENST00000511332 ZNF18P17022 549 aa13.71□□□□□ -0.21
COL6A6-203ENST00000511332 CD58P19256 250 aa13.71□□□□□ -0.21
COL6A6-203ENST00000511332 CDK11BP21127 795 aaKnown RBP13.71□□□□□ -0.21
COL6A6-203ENST00000511332 TUFMP49411 452 aaKnown RBP13.71□□□□□ -0.21
COL6A6-203ENST00000511332 NDST1P52848 882 aa13.71□□□□□ -0.21
COL6A6-203ENST00000511332 GCNT1Q02742 428 aa13.71□□□□□ -0.21
COL6A6-203ENST00000511332 LRMPQ12912 555 aa13.71□□□□□ -0.21
COL6A6-203ENST00000511332 CBX2Q14781 532 aaPredicted RBP13.71□□□□□ -0.21
COL6A6-203ENST00000511332 KRT31Q15323 416 aa13.71□□□□□ -0.21
COL6A6-203ENST00000511332 EXOC3L4Q17RC7 722 aa13.71□□□□□ -0.21
COL6A6-203ENST00000511332 CFAP221Q4G0U5 840 aa13.71□□□□□ -0.21
COL6A6-203ENST00000511332 MDH1BQ5I0G3 518 aa13.71□□□□□ -0.21
COL6A6-203ENST00000511332 ATAT1Q5SQI0 421 aa13.71□□□□□ -0.21
COL6A6-203ENST00000511332 FAM171BQ6P995 826 aa13.71□□□□□ -0.21
COL6A6-203ENST00000511332 TRIM65Q6PJ69 517 aa13.71□□□□□ -0.21
COL6A6-203ENST00000511332 GPR149Q86SP6 731 aa13.71□□□□□ -0.21
COL6A6-203ENST00000511332 LRRTM3Q86VH5 581 aa13.71□□□□□ -0.21
COL6A6-203ENST00000511332 PPM1KQ8N3J5 372 aa13.71□□□□□ -0.21
COL6A6-203ENST00000511332 C12orf76Q8N812 135 aaPredicted RBP13.71□□□□□ -0.21
COL6A6-203ENST00000511332 EHBP1Q8NDI1 1231 aa13.71□□□□□ -0.21
COL6A6-203ENST00000511332 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.71□□□□□ -0.21
COL6A6-203ENST00000511332 LMO3Q8TAP4 145 aa13.71□□□□□ -0.21
COL6A6-203ENST00000511332 MYCBPAPQ8TBZ2 947 aa13.71□□□□□ -0.21
COL6A6-203ENST00000511332 SUSD6Q92537 303 aa13.71□□□□□ -0.21
COL6A6-203ENST00000511332 SMG7Q92540 1137 aaKnown RBP13.71□□□□□ -0.21
COL6A6-203ENST00000511332 MYLPFQ96A32 169 aa13.71□□□□□ -0.21
COL6A6-203ENST00000511332 ASB2Q96Q27 587 aa13.71□□□□□ -0.21
COL6A6-203ENST00000511332 SEPT5Q99719 369 aaPredicted RBP13.71□□□□□ -0.21
COL6A6-203ENST00000511332 APOL5Q9BWW9 433 aa13.71□□□□□ -0.21
COL6A6-203ENST00000511332 NT5C1AQ9BXI3 368 aa13.71□□□□□ -0.21
COL6A6-203ENST00000511332 PRKD2Q9BZL6 878 aa13.71□□□□□ -0.21
COL6A6-203ENST00000511332 PIDD1Q9HB75 910 aa13.71□□□□□ -0.21
COL6A6-203ENST00000511332 CRTAC1Q9NQ79 661 aa13.71□□□□□ -0.21
COL6A6-203ENST00000511332 CISHQ9NSE2 258 aa13.71□□□□□ -0.21
COL6A6-203ENST00000511332 TAB2Q9NYJ8 693 aa13.71□□□□□ -0.21
COL6A6-203ENST00000511332 GTF3C4Q9UKN8 822 aa13.71□□□□□ -0.21
COL6A6-203ENST00000511332 DOCK6Q96HP0 2047 aa13.7□□□□□ -0.22
COL6A6-203ENST00000511332 NOTCH4Q99466 2003 aa13.7□□□□□ -0.22
COL6A6-203ENST00000511332 MYBPHLA2RUH7 354 aa13.7□□□□□ -0.22
COL6A6-203ENST00000511332 GRXCR2A6NFK2 248 aa13.7□□□□□ -0.22
COL6A6-203ENST00000511332 CCL16O15467 120 aa13.7□□□□□ -0.22
COL6A6-203ENST00000511332 ATP2C2O75185 946 aa13.7□□□□□ -0.22
COL6A6-203ENST00000511332 CILPO75339 1184 aa13.7□□□□□ -0.22
COL6A6-203ENST00000511332 PTPN1P18031 435 aaKnown RBP13.7□□□□□ -0.22
COL6A6-203ENST00000511332 ALDH1A3P47895 512 aa13.7□□□□□ -0.22
COL6A6-203ENST00000511332 KCNQ1P51787 676 aa13.7□□□□□ -0.22
COL6A6-203ENST00000511332 CYP27A1Q02318 531 aa13.7□□□□□ -0.22
COL6A6-203ENST00000511332 TWF1Q12792 350 aa13.7□□□□□ -0.22
COL6A6-203ENST00000511332 DUSP4Q13115 394 aa13.7□□□□□ -0.22
COL6A6-203ENST00000511332 SMAD2Q15796 467 aaKnown RBP13.7□□□□□ -0.22
COL6A6-203ENST00000511332 MGAT5BQ3V5L5 792 aa13.7□□□□□ -0.22
COL6A6-203ENST00000511332 FKBP15Q5T1M5 1219 aa13.7□□□□□ -0.22
COL6A6-203ENST00000511332 ENOSF1Q7L5Y1 443 aa13.7□□□□□ -0.22
COL6A6-203ENST00000511332 ATAD1Q8NBU5 361 aa13.7□□□□□ -0.22
COL6A6-203ENST00000511332 FAM200AQ8TCP9 573 aa13.7□□□□□ -0.22
COL6A6-203ENST00000511332 TATDN2Q93075 761 aa13.7□□□□□ -0.22
COL6A6-203ENST00000511332 ZNF707Q96C28 371 aaPredicted RBP13.7□□□□□ -0.22
COL6A6-203ENST00000511332 ARID3AQ99856 593 aa13.7□□□□□ -0.22
COL6A6-203ENST00000511332 ELOVL4Q9GZR5 314 aa13.7□□□□□ -0.22
COL6A6-203ENST00000511332 DPEP3Q9H4B8 488 aa13.7□□□□□ -0.22
COL6A6-203ENST00000511332 TMLHEQ9NVH6 421 aa13.7□□□□□ -0.22
COL6A6-203ENST00000511332 HMGXB4Q9UGU5 601 aa13.7□□□□□ -0.22
COL6A6-203ENST00000511332 LIMA1Q9UHB6 759 aaKnown RBP13.7□□□□□ -0.22
COL6A6-203ENST00000511332 NME7Q9Y5B8 376 aa13.7□□□□□ -0.22
COL6A6-203ENST00000511332 CLUHO75153 1309 aa13.69□□□□□ -0.22
COL6A6-203ENST00000511332 GOLGA6L19H0YKK7 550 aa13.69□□□□□ -0.22
COL6A6-203ENST00000511332 HAPLN1P10915 354 aaPredicted RBP13.69□□□□□ -0.22
COL6A6-203ENST00000511332 MAGEA11P43364 429 aa13.69□□□□□ -0.22
COL6A6-203ENST00000511332 EPHB3P54753 998 aa13.69□□□□□ -0.22
COL6A6-203ENST00000511332 RPL10AP62906 217 aaKnown RBP13.69□□□□□ -0.22
COL6A6-203ENST00000511332 VEPH1Q14D04 833 aa13.69□□□□□ -0.22
COL6A6-203ENST00000511332 IQCB1Q15051 598 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms