RNA–Protein interactions for RNA: ENST00000511032.5

DHFR-205, Transcript of dihydrofolate reductase, humanhuman

TSL 2 BASIC

Gene DHFR, Length 1,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-205ENST00000511032 THEM5Q8N1Q8 247 aa11.3□□□□□ -0.6
DHFR-205ENST00000511032 WHAMMQ8TF30 809 aa11.3□□□□□ -0.6
DHFR-205ENST00000511032 C18orf8Q96DM3 657 aa11.3□□□□□ -0.6
DHFR-205ENST00000511032 MRPL45Q9BRJ2 306 aaKnown RBP11.3□□□□□ -0.6
DHFR-205ENST00000511032 TLR10Q9BXR5 811 aa11.3□□□□□ -0.6
DHFR-205ENST00000511032 MRPL9Q9BYD2 267 aaKnown RBP11.3□□□□□ -0.6
DHFR-205ENST00000511032 WNT8AQ9H1J5 351 aa11.3□□□□□ -0.6
DHFR-205ENST00000511032 C11orf49Q9H6J7 331 aa11.3□□□□□ -0.6
DHFR-205ENST00000511032 IP6K2Q9UHH9 426 aa11.3□□□□□ -0.6
DHFR-205ENST00000511032 TSPAN16Q9UKR8 245 aa11.3□□□□□ -0.6
DHFR-205ENST00000511032 STXBP5LQ9Y2K9 1186 aa11.3□□□□□ -0.6
DHFR-205ENST00000511032 CASTOR2A6NHX0 329 aa11.29□□□□□ -0.6
DHFR-205ENST00000511032 TMEM110-MUSTN1A8MSY1 372 aa11.29□□□□□ -0.6
DHFR-205ENST00000511032 KCNK3O14649 394 aa11.29□□□□□ -0.6
DHFR-205ENST00000511032 FANCGO15287 622 aa11.29□□□□□ -0.6
DHFR-205ENST00000511032 CTIFO43310 598 aaKnown RBP11.29□□□□□ -0.6
DHFR-205ENST00000511032 TUBBP07437 444 aa11.29□□□□□ -0.6
DHFR-205ENST00000511032 CETN2P41208 172 aa11.29□□□□□ -0.6
DHFR-205ENST00000511032 CLCNKBP51801 687 aa11.29□□□□□ -0.6
DHFR-205ENST00000511032 BCAT1P54687 386 aa11.29□□□□□ -0.6
DHFR-205ENST00000511032 FAM189BP81408 668 aa11.29□□□□□ -0.6
DHFR-205ENST00000511032 TLE2Q04725 743 aa11.29□□□□□ -0.6
DHFR-205ENST00000511032 UPP1Q16831 310 aa11.29□□□□□ -0.6
DHFR-205ENST00000511032 GOLGA7BQ2TAP0 167 aa11.29□□□□□ -0.6
DHFR-205ENST00000511032 TRIM60Q495X7 471 aa11.29□□□□□ -0.6
DHFR-205ENST00000511032 ODF2Q5BJF6 829 aa11.29□□□□□ -0.6
DHFR-205ENST00000511032 SCARA3Q6AZY7 606 aa11.29□□□□□ -0.6
DHFR-205ENST00000511032 NECAB2Q7Z6G3 386 aa11.29□□□□□ -0.6
DHFR-205ENST00000511032 ACOT1Q86TX2 421 aa11.29□□□□□ -0.6
DHFR-205ENST00000511032 NT5DC3Q86UY8 548 aa11.29□□□□□ -0.6
DHFR-205ENST00000511032 DNAAF5Q86Y56 855 aa11.29□□□□□ -0.6
DHFR-205ENST00000511032 CRYBG2Q8N1P7 616 aa11.29□□□□□ -0.6
DHFR-205ENST00000511032 DNAJC5GQ8N7S2 189 aa11.29□□□□□ -0.6
DHFR-205ENST00000511032 C3orf20Q8ND61 904 aa11.29□□□□□ -0.6
DHFR-205ENST00000511032 GSTCDQ8NEC7 633 aa11.29□□□□□ -0.6
DHFR-205ENST00000511032 DBF4BQ8NFT6 615 aa11.29□□□□□ -0.6
DHFR-205ENST00000511032 FEZF2Q8TBJ5 459 aa11.29□□□□□ -0.6
DHFR-205ENST00000511032 TFAP2BQ92481 460 aa11.29□□□□□ -0.6
DHFR-205ENST00000511032 CAPZA3Q96KX2 299 aa11.29□□□□□ -0.6
DHFR-205ENST00000511032 SENP8Q96LD8 212 aa11.29□□□□□ -0.6
DHFR-205ENST00000511032 CXCL16Q9H2A7 254 aa11.29□□□□□ -0.6
DHFR-205ENST00000511032 CYLDQ9NQC7 956 aa11.29□□□□□ -0.6
DHFR-205ENST00000511032 TMEM39AQ9NV64 488 aa11.29□□□□□ -0.6
DHFR-205ENST00000511032 L1RE1Q9UN81 338 aa11.29□□□□□ -0.6
DHFR-205ENST00000511032 ATP11BQ9Y2G3 1177 aa11.29□□□□□ -0.6
DHFR-205ENST00000511032 MEIS3P2A8K0S8 358 aa11.28□□□□□ -0.6
DHFR-205ENST00000511032 CALCAP01258 141 aa11.28□□□□□ -0.6
DHFR-205ENST00000511032 CLTBP09497 229 aa11.28□□□□□ -0.6
DHFR-205ENST00000511032 ACADSBP45954 432 aa11.28□□□□□ -0.6
DHFR-205ENST00000511032 DNA2P51530 1060 aa11.28□□□□□ -0.6
DHFR-205ENST00000511032 LBX1P52954 281 aa11.28□□□□□ -0.6
DHFR-205ENST00000511032 GSCP56915 257 aaPredicted RBP11.28□□□□□ -0.6
DHFR-205ENST00000511032 PSMC1P62191 440 aaKnown RBP11.28□□□□□ -0.6
DHFR-205ENST00000511032 ITIH3Q06033 890 aa11.28□□□□□ -0.6
DHFR-205ENST00000511032 BST2Q10589 180 aaKnown RBP11.28□□□□□ -0.6
DHFR-205ENST00000511032 ZNF268Q14587 947 aaPredicted RBP11.28□□□□□ -0.6
DHFR-205ENST00000511032 MBTPS1Q14703 1052 aa11.28□□□□□ -0.6
DHFR-205ENST00000511032 MAPRE1Q15691 268 aaKnown RBP11.28□□□□□ -0.6
DHFR-205ENST00000511032 SEL1L2Q5TEA6 688 aa11.28□□□□□ -0.6
DHFR-205ENST00000511032 PLEKHA7Q6IQ23 1121 aa11.28□□□□□ -0.6
DHFR-205ENST00000511032 DENND1BQ6P3S1 775 aa11.28□□□□□ -0.6
DHFR-205ENST00000511032 ZDHHC17Q8IUH5 632 aa11.28□□□□□ -0.6
DHFR-205ENST00000511032 PDCL2Q8N4E4 241 aa11.28□□□□□ -0.6
DHFR-205ENST00000511032 STK32AQ8WU08 396 aa11.28□□□□□ -0.6
DHFR-205ENST00000511032 TWNKQ96RR1 684 aa11.28□□□□□ -0.6
DHFR-205ENST00000511032 NCAPGQ9BPX3 1015 aa11.28□□□□□ -0.6
DHFR-205ENST00000511032 PPP1R12CQ9BZL4 782 aa11.28□□□□□ -0.6
DHFR-205ENST00000511032 CARD9Q9H257 536 aa11.28□□□□□ -0.6
DHFR-205ENST00000511032 ABCB6Q9NP58 842 aa11.28□□□□□ -0.6
DHFR-205ENST00000511032 ST7Q9NRC1 585 aa11.28□□□□□ -0.6
DHFR-205ENST00000511032 RNF19AQ9NV58 838 aa11.28□□□□□ -0.6
DHFR-205ENST00000511032 HMGXB4Q9UGU5 601 aa11.28□□□□□ -0.6
DHFR-205ENST00000511032 CDH9Q9ULB4 789 aa11.28□□□□□ -0.6
DHFR-205ENST00000511032 ALG6Q9Y672 507 aa11.28□□□□□ -0.6
DHFR-205ENST00000511032 GOLGA6L10A0A0M3HER8 536 aa11.27□□□□□ -0.6
DHFR-205ENST00000511032 CARNS1A5YM72 827 aa11.27□□□□□ -0.6
DHFR-205ENST00000511032 TMEM189-UBE2V1I3L0A0 370 aa11.27□□□□□ -0.6
DHFR-205ENST00000511032 PGRMC1O00264 195 aaKnown RBP11.27□□□□□ -0.6
DHFR-205ENST00000511032 ENPP3O14638 875 aa11.27□□□□□ -0.6
DHFR-205ENST00000511032 SPTLC1O15269 473 aa11.27□□□□□ -0.6
DHFR-205ENST00000511032 NCK2O43639 380 aa11.27□□□□□ -0.6
DHFR-205ENST00000511032 NBNO60934 754 aa11.27□□□□□ -0.6
DHFR-205ENST00000511032 EFCAB14O75071 495 aa11.27□□□□□ -0.6
DHFR-205ENST00000511032 TADA3O75528 432 aa11.27□□□□□ -0.6
DHFR-205ENST00000511032 PDGFRBP09619 1106 aa11.27□□□□□ -0.6
DHFR-205ENST00000511032 MCM3P25205 808 aa11.27□□□□□ -0.6
DHFR-205ENST00000511032 SSTR3P32745 418 aaPredicted RBP11.27□□□□□ -0.6
DHFR-205ENST00000511032 MAN1A1P33908 653 aa11.27□□□□□ -0.6
DHFR-205ENST00000511032 AARSP49588 968 aaKnown RBP eCLIP11.27□□□□□ -0.68e-9■■■■■ 62.5
DHFR-205ENST00000511032 FAAP100Q0VG06 881 aa11.27□□□□□ -0.6
DHFR-205ENST00000511032 PDCLQ13371 301 aa11.27□□□□□ -0.6
DHFR-205ENST00000511032 ORC1Q13415 861 aa11.27□□□□□ -0.6
DHFR-205ENST00000511032 IKBKEQ14164 716 aa11.27□□□□□ -0.6
DHFR-205ENST00000511032 PIGHQ14442 188 aaPredicted RBP11.27□□□□□ -0.6
DHFR-205ENST00000511032 PPP2R5EQ16537 467 aa11.27□□□□□ -0.6
DHFR-205ENST00000511032 TEX35Q5T0J7 233 aa11.27□□□□□ -0.6
DHFR-205ENST00000511032 CNKSR3Q6P9H4 555 aa11.27□□□□□ -0.6
DHFR-205ENST00000511032 LIMS2Q7Z4I7 341 aa11.27□□□□□ -0.6
DHFR-205ENST00000511032 NPAS4Q8IUM7 802 aa11.27□□□□□ -0.6
DHFR-205ENST00000511032 B3GALNT2Q8NCR0 500 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms