RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 LRRC47Q8N1G4 583 aaKnown RBP8.7□□□□□ -1.02
HTT-208ENST00000510626 FNIP1Q8TF40 1166 aa8.7□□□□□ -1.02
HTT-208ENST00000510626 ANKHQ9HCJ1 492 aa8.7□□□□□ -1.02
HTT-208ENST00000510626 DRG1Q9Y295 367 aaKnown RBP8.7□□□□□ -1.02
HTT-208ENST00000510626 CEP152O94986 1710 aa8.7□□□□□ -1.02
HTT-208ENST00000510626 GDF11O95390 407 aa8.7□□□□□ -1.02
HTT-208ENST00000510626 CDH6P55285 790 aa8.7□□□□□ -1.02
HTT-208ENST00000510626 ZNF544Q6NX49 715 aa8.7□□□□□ -1.02
HTT-208ENST00000510626 C4orf50Q6ZRC1 276 aa8.7□□□□□ -1.02
HTT-208ENST00000510626 TMEM126BQ8IUX1 230 aa8.7□□□□□ -1.02
HTT-208ENST00000510626 PCNAP12004 261 aa8.7□□□□□ -1.02
HTT-208ENST00000510626 ATP4AP20648 1035 aa8.7□□□□□ -1.02
HTT-208ENST00000510626 MMRN1Q13201 1228 aa8.7□□□□□ -1.02
HTT-208ENST00000510626 TSNQ15631 228 aaKnown RBP8.7□□□□□ -1.02
HTT-208ENST00000510626 KCNK4Q9NYG8 393 aa8.7□□□□□ -1.02
HTT-208ENST00000510626 EMC3Q9P0I2 261 aa8.7□□□□□ -1.02
HTT-208ENST00000510626 XPO7Q9UIA9 1087 aaKnown RBP8.7□□□□□ -1.02
HTT-208ENST00000510626 CNOT3O75175 753 aaKnown RBP8.7□□□□□ -1.02
HTT-208ENST00000510626 TPP2P29144 1249 aaPredicted RBP8.7□□□□□ -1.02
HTT-208ENST00000510626 TAB3Q8N5C8 712 aaPredicted RBP8.7□□□□□ -1.02
HTT-208ENST00000510626 TMA16Q96EY4 203 aaKnown RBP8.7□□□□□ -1.02
HTT-208ENST00000510626 DMTF1Q9Y222 760 aa8.7□□□□□ -1.02
HTT-208ENST00000510626 HEY1Q9Y5J3 304 aa8.7□□□□□ -1.02
HTT-208ENST00000510626 PHGDHO43175 533 aaKnown RBP8.7□□□□□ -1.02
HTT-208ENST00000510626 SPDYAQ5MJ70 313 aa8.7□□□□□ -1.02
HTT-208ENST00000510626 XKRXQ6PP77 449 aa8.7□□□□□ -1.02
HTT-208ENST00000510626 CAMK1DQ8IU85 385 aa8.7□□□□□ -1.02
HTT-208ENST00000510626 CCDC36Q8IYA8 594 aa8.7□□□□□ -1.02
HTT-208ENST00000510626 NGRNQ9NPE2 291 aaKnown RBP8.7□□□□□ -1.02
HTT-208ENST00000510626 TSPAN9O75954 239 aa8.7□□□□□ -1.02
HTT-208ENST00000510626 CAPN1P07384 714 aa8.7□□□□□ -1.02
HTT-208ENST00000510626 C12orf60Q5U649 245 aa8.7□□□□□ -1.02
HTT-208ENST00000510626 VCPIP1Q96JH7 1222 aa8.7□□□□□ -1.02
HTT-208ENST00000510626 COMMD8Q9NX08 183 aa8.7□□□□□ -1.02
HTT-208ENST00000510626 ERAP1Q9NZ08 941 aa8.7□□□□□ -1.02
HTT-208ENST00000510626 NCAM2O15394 837 aa8.7□□□□□ -1.02
HTT-208ENST00000510626 HUS1O60921 280 aa8.7□□□□□ -1.02
HTT-208ENST00000510626 KCNA6P17658 529 aa8.7□□□□□ -1.02
HTT-208ENST00000510626 MXD4Q14582 209 aaPredicted RBP8.7□□□□□ -1.02
HTT-208ENST00000510626 SPATA18Q8TC71 538 aa8.7□□□□□ -1.02
HTT-208ENST00000510626 AENQ8WTP8 325 aaKnown RBP8.7□□□□□ -1.02
HTT-208ENST00000510626 ASZ1Q8WWH4 475 aa8.7□□□□□ -1.02
HTT-208ENST00000510626 EEF2KMTQ96G04 330 aa8.7□□□□□ -1.02
HTT-208ENST00000510626 TNIP3Q96KP6 325 aa8.7□□□□□ -1.02
HTT-208ENST00000510626 ASB2Q96Q27 587 aa8.7□□□□□ -1.02
HTT-208ENST00000510626 HEMGNQ9BXL5 484 aa8.7□□□□□ -1.02
HTT-208ENST00000510626 CAND2O75155 1236 aa8.69□□□□□ -1.02
HTT-208ENST00000510626 SAMD4BQ5PRF9 694 aaKnown RBP8.69□□□□□ -1.02
HTT-208ENST00000510626 ULK2Q8IYT8 1036 aa8.69□□□□□ -1.02
HTT-208ENST00000510626 CNKSR1Q969H4 720 aa8.69□□□□□ -1.02
HTT-208ENST00000510626 EDC3Q96F86 508 aaKnown RBP8.69□□□□□ -1.02
HTT-208ENST00000510626 PHTF1Q9UMS5 762 aa8.69□□□□□ -1.02
HTT-208ENST00000510626 CARD8Q9Y2G2 431 aa8.69□□□□□ -1.02
HTT-208ENST00000510626 ARIH1Q9Y4X5 557 aaPredicted RBP8.69□□□□□ -1.02
HTT-208ENST00000510626 MYH3P11055 1940 aa8.69□□□□□ -1.02
HTT-208ENST00000510626 IL6P05231 212 aa8.69□□□□□ -1.02
HTT-208ENST00000510626 CDH24Q86UP0 819 aa8.69□□□□□ -1.02
HTT-208ENST00000510626 ERO1BQ86YB8 467 aa8.69□□□□□ -1.02
HTT-208ENST00000510626 EHD1Q9H4M9 534 aa8.69□□□□□ -1.02
HTT-208ENST00000510626 R3HDM2Q9Y2K5 976 aaKnown RBP8.69□□□□□ -1.02
HTT-208ENST00000510626 P4HBP07237 508 aaKnown RBP8.69□□□□□ -1.02
HTT-208ENST00000510626 RUNDC3AQ59EK9 446 aa8.69□□□□□ -1.02
HTT-208ENST00000510626 C18orf8Q96DM3 657 aa8.69□□□□□ -1.02
HTT-208ENST00000510626 WNK4Q96J92 1243 aa8.69□□□□□ -1.02
HTT-208ENST00000510626 EGFL8Q99944 293 aa8.69□□□□□ -1.02
HTT-208ENST00000510626 NDUFB9Q9Y6M9 179 aa8.69□□□□□ -1.02
HTT-208ENST00000510626 SLC2A3P11169 496 aa8.69□□□□□ -1.02
HTT-208ENST00000510626 RNF43Q68DV7 783 aa8.69□□□□□ -1.02
HTT-208ENST00000510626 IZUMO2Q6UXV1 221 aa8.69□□□□□ -1.02
HTT-208ENST00000510626 RDM1Q8NG50 284 aa8.69□□□□□ -1.02
HTT-208ENST00000510626 FESP07332 822 aa8.69□□□□□ -1.02
HTT-208ENST00000510626 ANXA6P08133 673 aa8.69□□□□□ -1.02
HTT-208ENST00000510626 ZNF560Q96MR9 790 aa8.69□□□□□ -1.02
HTT-208ENST00000510626 MLXIPLQ9NP71 852 aa8.69□□□□□ -1.02
HTT-208ENST00000510626 CDC42BPGQ6DT37 1551 aa8.69□□□□□ -1.02
HTT-208ENST00000510626 LSM8O95777 96 aaKnown RBP8.69□□□□□ -1.02
HTT-208ENST00000510626 OCM2P0CE71 109 aa8.69□□□□□ -1.02
HTT-208ENST00000510626 OCMP0CE72 109 aaPredicted RBP8.69□□□□□ -1.02
HTT-208ENST00000510626 CCDC130P13994 396 aa8.69□□□□□ -1.02
HTT-208ENST00000510626 CDK8P49336 464 aa8.69□□□□□ -1.02
HTT-208ENST00000510626 PDXDC2PQ6P474 469 aa8.69□□□□□ -1.02
HTT-208ENST00000510626 PNKPQ96T60 521 aa8.69□□□□□ -1.02
HTT-208ENST00000510626 RPAP3Q9H6T3 665 aaPredicted RBP8.69□□□□□ -1.02
HTT-208ENST00000510626 TPRKBQ9Y3C4 175 aa8.69□□□□□ -1.02
HTT-208ENST00000510626 WBP4O75554 376 aaKnown RBP8.69□□□□□ -1.02
HTT-208ENST00000510626 STAT5AP42229 794 aa8.69□□□□□ -1.02
HTT-208ENST00000510626 STAT5BP51692 787 aa8.69□□□□□ -1.02
HTT-208ENST00000510626 ARHGEF19Q8IW93 802 aa8.69□□□□□ -1.02
HTT-208ENST00000510626 AP3S1Q92572 193 aa8.69□□□□□ -1.02
HTT-208ENST00000510626 GORASP1Q9BQQ3 440 aa8.69□□□□□ -1.02
HTT-208ENST00000510626 OSBPL11Q9BXB4 747 aa8.69□□□□□ -1.02
HTT-208ENST00000510626 CD248Q9HCU0 757 aa8.69□□□□□ -1.02
HTT-208ENST00000510626 RNF103O00237 685 aa8.69□□□□□ -1.02
HTT-208ENST00000510626 RIMBP2O15034 1052 aa8.69□□□□□ -1.02
HTT-208ENST00000510626 ASNSP08243 561 aa8.69□□□□□ -1.02
HTT-208ENST00000510626 MSL3P1P0C860 447 aa8.69□□□□□ -1.02
HTT-208ENST00000510626 ITGA8P53708 1063 aa8.69□□□□□ -1.02
HTT-208ENST00000510626 PTENP60484 403 aa8.69□□□□□ -1.02
HTT-208ENST00000510626 CHI3L2Q15782 390 aa8.69□□□□□ -1.02
HTT-208ENST00000510626 RFX4Q33E94 735 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms