RNA–Protein interactions for RNA: ENST00000510098.1

CAST-229, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 1,323 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-229ENST00000510098 TGM1P22735 817 aa4.73□□□□□ -1.65
CAST-229ENST00000510098 POU6F2P78424 691 aaPredicted RBP4.73□□□□□ -1.65
CAST-229ENST00000510098 LONRF1Q17RB8 773 aa4.73□□□□□ -1.65
CAST-229ENST00000510098 AMOTQ4VCS5 1084 aa4.73□□□□□ -1.65
CAST-229ENST00000510098 LMBRD2Q68DH5 695 aaPredicted RBP4.73□□□□□ -1.65
CAST-229ENST00000510098 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.73□□□□□ -1.65
CAST-229ENST00000510098 TSHZ1Q6ZSZ6 1077 aa4.73□□□□□ -1.65
CAST-229ENST00000510098 COLGALT2Q8IYK4 626 aa4.73□□□□□ -1.65
CAST-229ENST00000510098 CFAP52Q8N1V2 620 aa4.73□□□□□ -1.65
CAST-229ENST00000510098 MPP5Q8N3R9 675 aa4.73□□□□□ -1.65
CAST-229ENST00000510098 FAM46DQ8NEK8 389 aa4.73□□□□□ -1.65
CAST-229ENST00000510098 SVIPQ8NHG7 77 aa4.73□□□□□ -1.65
CAST-229ENST00000510098 LINC00476Q8WZB0 136 aa4.73□□□□□ -1.65
CAST-229ENST00000510098 BOD1Q96IK1 185 aa4.73□□□□□ -1.65
CAST-229ENST00000510098 TNIP3Q96KP6 325 aa4.73□□□□□ -1.65
CAST-229ENST00000510098 MED15Q96RN5 788 aa4.73□□□□□ -1.65
CAST-229ENST00000510098 TRIB1Q96RU8 372 aa4.73□□□□□ -1.65
CAST-229ENST00000510098 RPS6KC1Q96S38 1066 aa4.73□□□□□ -1.65
CAST-229ENST00000510098 VKORC1Q9BQB6 163 aa4.73□□□□□ -1.65
CAST-229ENST00000510098 NAA15Q9BXJ9 866 aaKnown RBP4.73□□□□□ -1.65
CAST-229ENST00000510098 GALNT9Q9HCQ5 603 aa4.73□□□□□ -1.65
CAST-229ENST00000510098 CHST12Q9NRB3 414 aa4.73□□□□□ -1.65
CAST-229ENST00000510098 TBCCD1Q9NVR7 557 aa4.73□□□□□ -1.65
CAST-229ENST00000510098 HSFX1Q9UBD0 423 aa4.73□□□□□ -1.65
CAST-229ENST00000510098 AGAP1Q9UPQ3 857 aa4.73□□□□□ -1.65
CAST-229ENST00000510098 TMX2Q9Y320 296 aa4.73□□□□□ -1.65
CAST-229ENST00000510098 KPNA5O15131 536 aa4.72□□□□□ -1.65
CAST-229ENST00000510098 BMP5P22003 454 aa4.72□□□□□ -1.65
CAST-229ENST00000510098 FDXRP22570 491 aa4.72□□□□□ -1.65
CAST-229ENST00000510098 ARFIP2P53365 341 aa4.72□□□□□ -1.65
CAST-229ENST00000510098 FMO1Q01740 532 aa4.72□□□□□ -1.65
CAST-229ENST00000510098 FOXI1Q12951 378 aa4.72□□□□□ -1.65
CAST-229ENST00000510098 RAB32Q13637 225 aa4.72□□□□□ -1.65
CAST-229ENST00000510098 ERCC6LQ2NKX8 1250 aa4.72□□□□□ -1.65
CAST-229ENST00000510098 PREPLQ4J6C6 727 aaPredicted RBP4.72□□□□□ -1.65
CAST-229ENST00000510098 HSP90AB4PQ58FF6 505 aa4.72□□□□□ -1.65
CAST-229ENST00000510098 FAM160B1Q5W0V3 765 aa4.72□□□□□ -1.65
CAST-229ENST00000510098 TAPT1Q6NXT6 567 aa4.72□□□□□ -1.65
CAST-229ENST00000510098 SLC30A10Q6XR72 485 aa4.72□□□□□ -1.65
CAST-229ENST00000510098 SLC15A4Q8N697 577 aa4.72□□□□□ -1.65
CAST-229ENST00000510098 NSUN7Q8NE18 718 aaKnown RBP4.72□□□□□ -1.65
CAST-229ENST00000510098 PHKBQ93100 1093 aa4.72□□□□□ -1.65
CAST-229ENST00000510098 TBCBQ99426 244 aa4.72□□□□□ -1.65
CAST-229ENST00000510098 MPHOSPH6Q99547 160 aaKnown RBP4.72□□□□□ -1.65
CAST-229ENST00000510098 PNPLA8Q9NP80 782 aa4.72□□□□□ -1.65
CAST-229ENST00000510098 TMEM74BQ9NUR3 256 aa4.72□□□□□ -1.65
CAST-229ENST00000510098 PHTF1Q9UMS5 762 aa4.72□□□□□ -1.65
CAST-229ENST00000510098 PAXBP1Q9Y5B6 917 aa4.72□□□□□ -1.65
CAST-229ENST00000510098 CCDC195A0A1B0GUA6 201 aa4.72□□□□□ -1.65
CAST-229ENST00000510098 FOXN3O00409 490 aaPredicted RBP4.72□□□□□ -1.65
CAST-229ENST00000510098 TOR1BO14657 336 aa4.72□□□□□ -1.65
CAST-229ENST00000510098 DNAJB5O75953 348 aa4.72□□□□□ -1.65
CAST-229ENST00000510098 ZFPL1O95159 310 aa4.72□□□□□ -1.65
CAST-229ENST00000510098 LMNAP02545 664 aaKnown RBP4.72□□□□□ -1.65
CAST-229ENST00000510098 PIK3CBP42338 1070 aa4.72□□□□□ -1.65
CAST-229ENST00000510098 SEC24CP53992 1094 aa4.72□□□□□ -1.65
CAST-229ENST00000510098 AK2P54819 239 aa4.72□□□□□ -1.65
CAST-229ENST00000510098 UCP3P55916 312 aa4.72□□□□□ -1.65
CAST-229ENST00000510098 CTBP1Q13363 440 aa4.72□□□□□ -1.65
CAST-229ENST00000510098 OS9Q13438 667 aaPredicted RBP4.72□□□□□ -1.65
CAST-229ENST00000510098 CYP2A13Q16696 494 aa4.72□□□□□ -1.65
CAST-229ENST00000510098 C3orf38Q5JPI3 329 aa4.72□□□□□ -1.65
CAST-229ENST00000510098 OLFML1Q6UWY5 402 aa4.72□□□□□ -1.65
CAST-229ENST00000510098 DNAJC10Q8IXB1 793 aa4.72□□□□□ -1.65
CAST-229ENST00000510098 SLC44A3Q8N4M1 653 aa4.72□□□□□ -1.65
CAST-229ENST00000510098 DNAJC5GQ8N7S2 189 aa4.72□□□□□ -1.65
CAST-229ENST00000510098 SLC9A6Q92581 669 aa4.72□□□□□ -1.65
CAST-229ENST00000510098 FUBP1Q96AE4 644 aaKnown RBP4.72□□□□□ -1.65
CAST-229ENST00000510098 CRAMP1Q96RY5 1269 aa4.72□□□□□ -1.65
CAST-229ENST00000510098 ZNF518BQ9C0D4 1074 aa4.72□□□□□ -1.65
CAST-229ENST00000510098 ZNF700Q9H0M5 742 aa4.72□□□□□ -1.65
CAST-229ENST00000510098 STK32BQ9NY57 414 aa4.72□□□□□ -1.65
CAST-229ENST00000510098 ZNHIT2Q9UHR6 403 aa4.72□□□□□ -1.65
CAST-229ENST00000510098 NEU2Q9Y3R4 380 aa4.72□□□□□ -1.65
CAST-229ENST00000510098 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.71□□□□□ -1.66
CAST-229ENST00000510098 MYADML2A6NDP7 307 aa4.71□□□□□ -1.66
CAST-229ENST00000510098 NUDT3O95989 172 aa4.71□□□□□ -1.66
CAST-229ENST00000510098 KCNA2P16389 499 aa4.71□□□□□ -1.66
CAST-229ENST00000510098 CHRM3P20309 590 aa4.71□□□□□ -1.66
CAST-229ENST00000510098 ADRA1BP35368 520 aa4.71□□□□□ -1.66
CAST-229ENST00000510098 PLA2G5P39877 138 aa4.71□□□□□ -1.66
CAST-229ENST00000510098 MPLP40238 635 aa4.71□□□□□ -1.66
CAST-229ENST00000510098 SLC11A2P49281 568 aa4.71□□□□□ -1.66
CAST-229ENST00000510098 PRIM2P49643 509 aa4.71□□□□□ -1.66
CAST-229ENST00000510098 NANOS3P60323 173 aaKnown RBP4.71□□□□□ -1.66
CAST-229ENST00000510098 RPS16P62249 146 aaKnown RBP4.71□□□□□ -1.66
CAST-229ENST00000510098 MPP3Q13368 585 aa4.71□□□□□ -1.66
CAST-229ENST00000510098 C4orf46Q504U0 113 aa4.71□□□□□ -1.66
CAST-229ENST00000510098 PPP1R32Q7Z5V6 425 aa4.71□□□□□ -1.66
CAST-229ENST00000510098 CLNKQ7Z7G1 428 aa4.71□□□□□ -1.66
CAST-229ENST00000510098 SRLQ86TD4 932 aa4.71□□□□□ -1.66
CAST-229ENST00000510098 SESTD1Q86VW0 696 aa4.71□□□□□ -1.66
CAST-229ENST00000510098 CCDC33Q8N5R6 958 aa4.71□□□□□ -1.66
CAST-229ENST00000510098 Q8NA96 180 aa4.71□□□□□ -1.66
CAST-229ENST00000510098 PSD4Q8NDX1 1056 aa4.71□□□□□ -1.66
CAST-229ENST00000510098 NMD3Q96D46 503 aaKnown RBP4.71□□□□□ -1.66
CAST-229ENST00000510098 Q96MF0 132 aa4.71□□□□□ -1.66
CAST-229ENST00000510098 MOGAT1Q96PD6 335 aa4.71□□□□□ -1.66
CAST-229ENST00000510098 STRBPQ96SI9 672 aaKnown RBP4.71□□□□□ -1.66
CAST-229ENST00000510098 MYD88Q99836 296 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms