RNA–Protein interactions for RNA: ENST00000509818.5

SEC24D-209, Transcript of SEC24 homolog D, COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC24D, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24D-209ENST00000509818 C18orf8Q96DM3 657 aa9.59□□□□□ -0.87
SEC24D-209ENST00000509818 APOL6Q9BWW8 343 aa9.59□□□□□ -0.87
SEC24D-209ENST00000509818 NT5C1AQ9BXI3 368 aa9.59□□□□□ -0.87
SEC24D-209ENST00000509818 DNAI2Q9GZS0 605 aa9.59□□□□□ -0.87
SEC24D-209ENST00000509818 MIS12Q9H081 205 aa9.59□□□□□ -0.87
SEC24D-209ENST00000509818 NXF3Q9H4D5 531 aaKnown RBP9.59□□□□□ -0.87
SEC24D-209ENST00000509818 PLEKHA4Q9H4M7 779 aa9.59□□□□□ -0.87
SEC24D-209ENST00000509818 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.59□□□□□ -0.87
SEC24D-209ENST00000509818 RRP15Q9Y3B9 282 aaKnown RBP9.59□□□□□ -0.87
SEC24D-209ENST00000509818 NR2E1Q9Y466 385 aa9.59□□□□□ -0.87
SEC24D-209ENST00000509818 HES2Q9Y543 173 aa9.59□□□□□ -0.87
SEC24D-209ENST00000509818 TRIP11Q15643 1979 aa9.58□□□□□ -0.88
SEC24D-209ENST00000509818 SMIM28A0A1B0GU29 152 aa9.58□□□□□ -0.88
SEC24D-209ENST00000509818 ESYT3A0FGR9 886 aa9.58□□□□□ -0.88
SEC24D-209ENST00000509818 SIGLEC16A6NMB1 481 aa9.58□□□□□ -0.88
SEC24D-209ENST00000509818 TTI1O43156 1089 aa9.58□□□□□ -0.88
SEC24D-209ENST00000509818 MICAL2O94851 1124 aa9.58□□□□□ -0.88
SEC24D-209ENST00000509818 CYP3A5P20815 502 aa9.58□□□□□ -0.88
SEC24D-209ENST00000509818 AKAP5P24588 427 aa9.58□□□□□ -0.88
SEC24D-209ENST00000509818 HOXD10P28358 340 aa9.58□□□□□ -0.88
SEC24D-209ENST00000509818 PNPLA4P41247 253 aa9.58□□□□□ -0.88
SEC24D-209ENST00000509818 SSR1P43307 286 aaKnown RBP9.58□□□□□ -0.88
SEC24D-209ENST00000509818 AARSP49588 968 aaKnown RBP eCLIP9.58□□□□□ -0.88
SEC24D-209ENST00000509818 GTF2A1P52655 376 aaPredicted RBP9.58□□□□□ -0.88
SEC24D-209ENST00000509818 GSCP56915 257 aaPredicted RBP9.58□□□□□ -0.88
SEC24D-209ENST00000509818 PRKCZQ05513 592 aa9.58□□□□□ -0.88
SEC24D-209ENST00000509818 CYP1B1Q16678 543 aa9.58□□□□□ -0.88
SEC24D-209ENST00000509818 PPP1R15BQ5SWA1 713 aa9.58□□□□□ -0.88
SEC24D-209ENST00000509818 LRRC38Q5VT99 294 aa9.58□□□□□ -0.88
SEC24D-209ENST00000509818 C9orf57Q5W0N0 161 aa9.58□□□□□ -0.88
SEC24D-209ENST00000509818 ALS2CLQ60I27 953 aa9.58□□□□□ -0.88
SEC24D-209ENST00000509818 RPAINQ86UA6 219 aa9.58□□□□□ -0.88
SEC24D-209ENST00000509818 KATNAL2Q8IYT4 538 aa9.58□□□□□ -0.88
SEC24D-209ENST00000509818 PRELID2Q8N945 189 aa9.58□□□□□ -0.88
SEC24D-209ENST00000509818 SEC14L1Q92503 715 aa9.58□□□□□ -0.88
SEC24D-209ENST00000509818 ARMC5Q96C12 935 aa9.58□□□□□ -0.88
SEC24D-209ENST00000509818 DDX27Q96GQ7 796 aaKnown RBP9.58□□□□□ -0.88
SEC24D-209ENST00000509818 GDAP1L1Q96MZ0 367 aa9.58□□□□□ -0.88
SEC24D-209ENST00000509818 TWNKQ96RR1 684 aa9.58□□□□□ -0.88
SEC24D-209ENST00000509818 SYNCQ9H7C4 482 aa9.58□□□□□ -0.88
SEC24D-209ENST00000509818 ERVK-5Q9HDB9 667 aa9.58□□□□□ -0.88
SEC24D-209ENST00000509818 MED4Q9NPJ6 270 aa9.58□□□□□ -0.88
SEC24D-209ENST00000509818 CHST12Q9NRB3 414 aa9.58□□□□□ -0.88
SEC24D-209ENST00000509818 PCYOX1Q9UHG3 505 aa9.58□□□□□ -0.88
SEC24D-209ENST00000509818 USTQ9Y2C2 406 aa9.58□□□□□ -0.88
SEC24D-209ENST00000509818 CDY2AQ9Y6F7 541 aa9.58□□□□□ -0.88
SEC24D-209ENST00000509818 ZSCAN5CA6NGD5 496 aaPredicted RBP9.57□□□□□ -0.88
SEC24D-209ENST00000509818 O00370 1275 aa9.57□□□□□ -0.88
SEC24D-209ENST00000509818 PODXLO00592 558 aa9.57□□□□□ -0.88
SEC24D-209ENST00000509818 PIRO00625 290 aa9.57□□□□□ -0.88
SEC24D-209ENST00000509818 RARAP10276 462 aa9.57□□□□□ -0.88
SEC24D-209ENST00000509818 KRT3P12035 628 aa9.57□□□□□ -0.88
SEC24D-209ENST00000509818 GABRB2P47870 512 aa9.57□□□□□ -0.88
SEC24D-209ENST00000509818 FNTAP49354 379 aa9.57□□□□□ -0.88
SEC24D-209ENST00000509818 DRG2P55039 364 aaKnown RBP9.57□□□□□ -0.88
SEC24D-209ENST00000509818 PSMC1P62191 440 aaKnown RBP9.57□□□□□ -0.88
SEC24D-209ENST00000509818 RPL7AP62424 266 aaKnown RBP9.57□□□□□ -0.88
SEC24D-209ENST00000509818 HLTFQ14527 1009 aaKnown RBP eCLIP9.57□□□□□ -0.882e-6■■■■□ 23.7
SEC24D-209ENST00000509818 TTC31Q49AM3 519 aaPredicted RBP9.57□□□□□ -0.88
SEC24D-209ENST00000509818 PTPN20Q4JDL3 420 aa9.57□□□□□ -0.88
SEC24D-209ENST00000509818 TWF2Q6IBS0 349 aaKnown RBP9.57□□□□□ -0.88
SEC24D-209ENST00000509818 GDF6Q6KF10 455 aaPredicted RBP9.57□□□□□ -0.88
SEC24D-209ENST00000509818 LCLAT1Q6UWP7 414 aa9.57□□□□□ -0.88
SEC24D-209ENST00000509818 SESTD1Q86VW0 696 aa9.57□□□□□ -0.88
SEC24D-209ENST00000509818 FAM228AQ86W67 206 aa9.57□□□□□ -0.88
SEC24D-209ENST00000509818 UNC93AQ86WB7 457 aa9.57□□□□□ -0.88
SEC24D-209ENST00000509818 HACE1Q8IYU2 909 aa9.57□□□□□ -0.88
SEC24D-209ENST00000509818 RCOR2Q8IZ40 523 aa9.57□□□□□ -0.88
SEC24D-209ENST00000509818 NIPA2Q8N8Q9 360 aa9.57□□□□□ -0.88
SEC24D-209ENST00000509818 C12orf50Q8NA57 414 aaPredicted RBP9.57□□□□□ -0.88
SEC24D-209ENST00000509818 EXD1Q8NHP7 514 aa9.57□□□□□ -0.88
SEC24D-209ENST00000509818 C18orf25Q96B23 403 aaPredicted RBP9.57□□□□□ -0.88
SEC24D-209ENST00000509818 ZNF333Q96JL9 665 aa9.57□□□□□ -0.88
SEC24D-209ENST00000509818 ZNF560Q96MR9 790 aa9.57□□□□□ -0.88
SEC24D-209ENST00000509818 MCEEQ96PE7 176 aa9.57□□□□□ -0.88
SEC24D-209ENST00000509818 CXCL16Q9H2A7 254 aa9.57□□□□□ -0.88
SEC24D-209ENST00000509818 XPNPEP3Q9NQH7 507 aa9.57□□□□□ -0.88
SEC24D-209ENST00000509818 HOMER3Q9NSC5 361 aa9.57□□□□□ -0.88
SEC24D-209ENST00000509818 TUBGCP4Q9UGJ1 667 aa9.57□□□□□ -0.88
SEC24D-209ENST00000509818 HMGXB4Q9UGU5 601 aa9.57□□□□□ -0.88
SEC24D-209ENST00000509818 ADAM21Q9UKJ8 722 aa9.57□□□□□ -0.88
SEC24D-209ENST00000509818 IPPQ9Y573 584 aa9.57□□□□□ -0.88
SEC24D-209ENST00000509818 SNX9Q9Y5X1 595 aa9.57□□□□□ -0.88
SEC24D-209ENST00000509818 SCN10AQ9Y5Y9 1956 aa9.57□□□□□ -0.88
SEC24D-209ENST00000509818 M0QYV0 167 aa9.57□□□□□ -0.88
SEC24D-209ENST00000509818 ADAMTS4O75173 837 aa9.57□□□□□ -0.88
SEC24D-209ENST00000509818 GJB6O95452 261 aa9.57□□□□□ -0.88
SEC24D-209ENST00000509818 CST5P28325 142 aaPredicted RBP9.57□□□□□ -0.88
SEC24D-209ENST00000509818 GBP1P32455 592 aa9.57□□□□□ -0.88
SEC24D-209ENST00000509818 COILP38432 576 aaPredicted RBP9.57□□□□□ -0.88
SEC24D-209ENST00000509818 PTGIRP43119 386 aa9.57□□□□□ -0.88
SEC24D-209ENST00000509818 GPD2P43304 727 aa9.57□□□□□ -0.88
SEC24D-209ENST00000509818 SNX16P57768 344 aa9.57□□□□□ -0.88
SEC24D-209ENST00000509818 TAS2R40P59535 323 aa9.57□□□□□ -0.88
SEC24D-209ENST00000509818 TRIM32Q13049 653 aa9.57□□□□□ -0.88
SEC24D-209ENST00000509818 ORC1Q13415 861 aa9.57□□□□□ -0.88
SEC24D-209ENST00000509818 KCNA10Q16322 511 aa9.57□□□□□ -0.88
SEC24D-209ENST00000509818 FAM47CQ5HY64 1035 aa9.57□□□□□ -0.88
SEC24D-209ENST00000509818 GLRA4Q5JXX5 417 aa9.57□□□□□ -0.88
SEC24D-209ENST00000509818 CYP4A22Q5TCH4 519 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms