RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 SHC3Q92529 594 aa4.9□□□□□ -1.63
NIPBL-206ENST00000509429 EXOC4Q96A65 974 aa4.9□□□□□ -1.63
NIPBL-206ENST00000509429 KIF1BPQ96EK5 621 aa4.9□□□□□ -1.63
NIPBL-206ENST00000509429 GIMAP5Q96F15 307 aa4.9□□□□□ -1.63
NIPBL-206ENST00000509429 RADILQ96JH8 1075 aa4.9□□□□□ -1.63
NIPBL-206ENST00000509429 JAKMIP1Q96N16 626 aaKnown RBP4.9□□□□□ -1.63
NIPBL-206ENST00000509429 TMEM74Q96NL1 305 aa4.9□□□□□ -1.63
NIPBL-206ENST00000509429 ASB2Q96Q27 587 aa4.9□□□□□ -1.63
NIPBL-206ENST00000509429 MTMR9Q96QG7 549 aa4.9□□□□□ -1.63
NIPBL-206ENST00000509429 ZPBPQ9BS86 351 aa4.9□□□□□ -1.63
NIPBL-206ENST00000509429 DESI2Q9BSY9 194 aa4.9□□□□□ -1.63
NIPBL-206ENST00000509429 MMADHCQ9H3L0 296 aaPredicted RBP4.9□□□□□ -1.63
NIPBL-206ENST00000509429 SMARCAD1Q9H4L7 1026 aa4.9□□□□□ -1.63
NIPBL-206ENST00000509429 UPF2Q9HAU5 1272 aaKnown RBP4.9□□□□□ -1.63
NIPBL-206ENST00000509429 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.9□□□□□ -1.63
NIPBL-206ENST00000509429 AATFQ9NY61 560 aaKnown RBP eCLIP4.9□□□□□ -1.63
NIPBL-206ENST00000509429 RNF7Q9UBF6 113 aa4.9□□□□□ -1.63
NIPBL-206ENST00000509429 HPCAL4Q9UM19 191 aa4.9□□□□□ -1.63
NIPBL-206ENST00000509429 EDARQ9UNE0 448 aa4.9□□□□□ -1.63
NIPBL-206ENST00000509429 FAM50BQ9Y247 325 aa4.9□□□□□ -1.63
NIPBL-206ENST00000509429 CARD8Q9Y2G2 431 aa4.9□□□□□ -1.63
NIPBL-206ENST00000509429 GPR52Q9Y2T5 361 aa4.9□□□□□ -1.63
NIPBL-206ENST00000509429 SOS1Q07889 1333 aaPredicted RBP4.9□□□□□ -1.63
NIPBL-206ENST00000509429 SAMD9Q5K651 1589 aa4.9□□□□□ -1.63
NIPBL-206ENST00000509429 CASKIN1Q8WXD9 1431 aa4.89□□□□□ -1.63
NIPBL-206ENST00000509429 GPR75-ASB3A0A0A6YYF3 556 aa4.89□□□□□ -1.63
NIPBL-206ENST00000509429 C2orf71A6NGG8 1288 aa4.89□□□□□ -1.63
NIPBL-206ENST00000509429 CYSRT1A8MQ03 144 aa4.89□□□□□ -1.63
NIPBL-206ENST00000509429 AREL1O15033 823 aa4.89□□□□□ -1.63
NIPBL-206ENST00000509429 KIAA0355O15063 1070 aa4.89□□□□□ -1.63
NIPBL-206ENST00000509429 OPA1O60313 960 aa4.89□□□□□ -1.63
NIPBL-206ENST00000509429 TLR5O60602 858 aa4.89□□□□□ -1.63
NIPBL-206ENST00000509429 SOCS5O75159 536 aa4.89□□□□□ -1.63
NIPBL-206ENST00000509429 MAFO75444 373 aaPredicted RBP4.89□□□□□ -1.63
NIPBL-206ENST00000509429 ZNF189O75820 626 aaPredicted RBP4.89□□□□□ -1.63
NIPBL-206ENST00000509429 ASMTLO95671 621 aa4.89□□□□□ -1.63
NIPBL-206ENST00000509429 ITGB1P05556 798 aa4.89□□□□□ -1.63
NIPBL-206ENST00000509429 VIMP08670 466 aaKnown RBP4.89□□□□□ -1.63
NIPBL-206ENST00000509429 CTSHP09668 335 aa4.89□□□□□ -1.63
NIPBL-206ENST00000509429 C6orf222P0C671 652 aaPredicted RBP4.89□□□□□ -1.63
NIPBL-206ENST00000509429 ITGA4P13612 1032 aa4.89□□□□□ -1.63
NIPBL-206ENST00000509429 HSD3B1P14060 373 aa4.89□□□□□ -1.63
NIPBL-206ENST00000509429 TFEBP19484 476 aa4.89□□□□□ -1.63
NIPBL-206ENST00000509429 GBP2P32456 591 aaPredicted RBP4.89□□□□□ -1.63
NIPBL-206ENST00000509429 HADHAP40939 763 aa4.89□□□□□ -1.63
NIPBL-206ENST00000509429 STAT1P42224 750 aa4.89□□□□□ -1.63
NIPBL-206ENST00000509429 BLVRAP53004 296 aa4.89□□□□□ -1.63
NIPBL-206ENST00000509429 DR1Q01658 176 aa4.89□□□□□ -1.63
NIPBL-206ENST00000509429 ZBTB16Q05516 673 aa4.89□□□□□ -1.63
NIPBL-206ENST00000509429 KIF5AQ12840 1032 aa4.89□□□□□ -1.63
NIPBL-206ENST00000509429 IFRD2Q12894 506 aaPredicted RBP4.89□□□□□ -1.63
NIPBL-206ENST00000509429 MTMR1Q13613 665 aa4.89□□□□□ -1.63
NIPBL-206ENST00000509429 LAMB3Q13751 1172 aa4.89□□□□□ -1.63
NIPBL-206ENST00000509429 GBX1Q14549 363 aa4.89□□□□□ -1.63
NIPBL-206ENST00000509429 ASIC2Q16515 512 aa4.89□□□□□ -1.63
NIPBL-206ENST00000509429 LRRFIP1Q32MZ4 808 aaKnown RBP4.89□□□□□ -1.63
NIPBL-206ENST00000509429 SLC45A4Q5BKX6 768 aa4.89□□□□□ -1.63
NIPBL-206ENST00000509429 MEX3CQ5U5Q3 659 aaKnown RBP4.89□□□□□ -1.63
NIPBL-206ENST00000509429 TPGS2Q68CL5 300 aa4.89□□□□□ -1.63
NIPBL-206ENST00000509429 INTS3Q68E01 1043 aaKnown RBP4.89□□□□□ -1.63
NIPBL-206ENST00000509429 ITPRIPL1Q6GPH6 555 aa4.89□□□□□ -1.63
NIPBL-206ENST00000509429 CENPQQ7L2Z9 268 aaPredicted RBP4.89□□□□□ -1.63
NIPBL-206ENST00000509429 LPCAT2Q7L5N7 544 aa4.89□□□□□ -1.63
NIPBL-206ENST00000509429 HS2ST1Q7LGA3 356 aa4.89□□□□□ -1.63
NIPBL-206ENST00000509429 RNF180Q86T96 592 aa4.89□□□□□ -1.63
NIPBL-206ENST00000509429 SPATA24Q86W54 205 aa4.89□□□□□ -1.63
NIPBL-206ENST00000509429 RAB11FIP4Q86YS3 637 aa4.89□□□□□ -1.63
NIPBL-206ENST00000509429 RIOX2Q8IUF8 465 aa4.89□□□□□ -1.63
NIPBL-206ENST00000509429 GRAMD2AQ8IUY3 354 aa4.89□□□□□ -1.63
NIPBL-206ENST00000509429 PASD1Q8IV76 773 aa4.89□□□□□ -1.63
NIPBL-206ENST00000509429 LRRC71Q8N4P6 559 aa4.89□□□□□ -1.63
NIPBL-206ENST00000509429 AFAP1L2Q8N4X5 818 aa4.89□□□□□ -1.63
NIPBL-206ENST00000509429 ZBTB8BQ8NAP8 495 aaPredicted RBP4.89□□□□□ -1.63
NIPBL-206ENST00000509429 SUPT20HQ8NEM7 779 aa4.89□□□□□ -1.63
NIPBL-206ENST00000509429 PARD3BQ8TEW8 1205 aa4.89□□□□□ -1.63
NIPBL-206ENST00000509429 HDAC2Q92769 488 aaKnown RBP4.89□□□□□ -1.63
NIPBL-206ENST00000509429 SEC16BQ96JE7 1060 aa4.89□□□□□ -1.63
NIPBL-206ENST00000509429 MPHOSPH8Q99549 860 aa4.89□□□□□ -1.63
NIPBL-206ENST00000509429 TUBA1CQ9BQE3 449 aa4.89□□□□□ -1.63
NIPBL-206ENST00000509429 ISCA1Q9BUE6 129 aa4.89□□□□□ -1.63
NIPBL-206ENST00000509429 CARD11Q9BXL7 1154 aa4.89□□□□□ -1.63
NIPBL-206ENST00000509429 NACAP1Q9BZK3 213 aa4.89□□□□□ -1.63
NIPBL-206ENST00000509429 KIAA1683Q9H0B3 1180 aa4.89□□□□□ -1.63
NIPBL-206ENST00000509429 WNT5BQ9H1J7 359 aa4.89□□□□□ -1.63
NIPBL-206ENST00000509429 ZWILCHQ9H900 591 aa4.89□□□□□ -1.63
NIPBL-206ENST00000509429 PARVGQ9HBI0 331 aa4.89□□□□□ -1.63
NIPBL-206ENST00000509429 PLA2G3Q9NZ20 509 aa4.89□□□□□ -1.63
NIPBL-206ENST00000509429 EIF2B4Q9UI10 523 aaKnown RBP4.89□□□□□ -1.63
NIPBL-206ENST00000509429 CAB39Q9Y376 341 aaPredicted RBP4.89□□□□□ -1.63
NIPBL-206ENST00000509429 ZNF451Q9Y4E5 1061 aa4.89□□□□□ -1.63
NIPBL-206ENST00000509429 BACE2Q9Y5Z0 518 aa4.89□□□□□ -1.63
NIPBL-206ENST00000509429 PTPN23Q9H3S7 1636 aa4.89□□□□□ -1.63
NIPBL-206ENST00000509429 ROBO2Q9HCK4 1378 aa4.89□□□□□ -1.63
NIPBL-206ENST00000509429 FMN1Q68DA7 1419 aa4.89□□□□□ -1.63
NIPBL-206ENST00000509429 CCDC18Q5T9S5 1454 aa4.88□□□□□ -1.63
NIPBL-206ENST00000509429 ABCA10Q8WWZ4 1543 aa4.88□□□□□ -1.63
NIPBL-206ENST00000509429 A0A087X0B3 334 aa4.88□□□□□ -1.63
NIPBL-206ENST00000509429 hCG_1642624A0A1W2PR95 340 aa4.88□□□□□ -1.63
NIPBL-206ENST00000509429 TTC34A8MYJ7 566 aa4.88□□□□□ -1.63
NIPBL-206ENST00000509429 M0R3H8 397 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms