RNA–Protein interactions for RNA: ENST00000509328.1

HOXC6-204, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-204ENST00000509328 ALDH1A3P47895 512 aa21.54■■□□□ 1.04
HOXC6-204ENST00000509328 PSMC1P62191 440 aaKnown RBP21.54■■□□□ 1.04
HOXC6-204ENST00000509328 TYRO3Q06418 890 aa21.54■■□□□ 1.04
HOXC6-204ENST00000509328 SKOR2Q2VWA4 1001 aaPredicted RBP21.54■■□□□ 1.04
HOXC6-204ENST00000509328 MGAT5BQ3V5L5 792 aa21.54■■□□□ 1.04
HOXC6-204ENST00000509328 C11orf57Q6ZUT1 292 aaPredicted RBP21.54■■□□□ 1.04
HOXC6-204ENST00000509328 GRASPQ7Z6J2 395 aaPredicted RBP21.54■■□□□ 1.04
HOXC6-204ENST00000509328 ELMOD1Q8N336 334 aa21.54■■□□□ 1.04
HOXC6-204ENST00000509328 TTC9BQ8N6N2 239 aa21.54■■□□□ 1.04
HOXC6-204ENST00000509328 NECAB3Q96P71 396 aaPredicted RBP21.54■■□□□ 1.04
HOXC6-204ENST00000509328 ABCB6Q9NP58 842 aa21.54■■□□□ 1.04
HOXC6-204ENST00000509328 CRTAC1Q9NQ79 661 aa21.54■■□□□ 1.04
HOXC6-204ENST00000509328 MAGEC2Q9UBF1 373 aaPredicted RBP21.54■■□□□ 1.04
HOXC6-204ENST00000509328 NR2E1Q9Y466 385 aa21.54■■□□□ 1.04
HOXC6-204ENST00000509328 A0A0C4DFX4 3053 aa21.53■■□□□ 1.04
HOXC6-204ENST00000509328 C19orf67A6NJJ6 358 aa21.53■■□□□ 1.04
HOXC6-204ENST00000509328 LETM1O95202 739 aaPredicted RBP21.53■■□□□ 1.04
HOXC6-204ENST00000509328 HAPLN1P10915 354 aaPredicted RBP21.53■■□□□ 1.04
HOXC6-204ENST00000509328 PTPN2P17706 415 aa21.53■■□□□ 1.04
HOXC6-204ENST00000509328 PTPN1P18031 435 aaKnown RBP21.53■■□□□ 1.04
HOXC6-204ENST00000509328 MTIF2P46199 727 aaKnown RBP21.53■■□□□ 1.04
HOXC6-204ENST00000509328 EPHB3P54753 998 aa21.53■■□□□ 1.04
HOXC6-204ENST00000509328 C4orf50Q6ZRC1 276 aa21.53■■□□□ 1.04
HOXC6-204ENST00000509328 UNC93AQ86WB7 457 aa21.53■■□□□ 1.04
HOXC6-204ENST00000509328 SPATA2LQ8IUW3 424 aaPredicted RBP21.53■■□□□ 1.04
HOXC6-204ENST00000509328 FUBP3Q96I24 572 aaKnown RBP eCLIP21.53■■□□□ 1.04
HOXC6-204ENST00000509328 ZNF512Q96ME7 567 aaPredicted RBP21.53■■□□□ 1.04
HOXC6-204ENST00000509328 SEPT5Q99719 369 aaPredicted RBP21.53■■□□□ 1.04
HOXC6-204ENST00000509328 DNMT3BQ9UBC3 853 aaKnown RBP21.53■■□□□ 1.04
HOXC6-204ENST00000509328 NFE2L3Q9Y4A8 694 aa21.53■■□□□ 1.04
HOXC6-204ENST00000509328 DOCK8Q8NF50 2099 aa21.52■■□□□ 1.04
HOXC6-204ENST00000509328 LOC730098B7Z3J9 87 aa21.52■■□□□ 1.04
HOXC6-204ENST00000509328 CDR1P51861 262 aa21.52■■□□□ 1.04
HOXC6-204ENST00000509328 INCA1Q0VD86 236 aa21.52■■□□□ 1.04
HOXC6-204ENST00000509328 CFAP221Q4G0U5 840 aa21.52■■□□□ 1.04
HOXC6-204ENST00000509328 B3GALNT2Q8NCR0 500 aa21.52■■□□□ 1.04
HOXC6-204ENST00000509328 MYCBPAPQ8TBZ2 947 aa21.52■■□□□ 1.04
HOXC6-204ENST00000509328 TATDN2Q93075 761 aa21.52■■□□□ 1.04
HOXC6-204ENST00000509328 RPGRIP1Q96KN7 1286 aa21.52■■□□□ 1.04
HOXC6-204ENST00000509328 TNIP3Q96KP6 325 aa21.52■■□□□ 1.04
HOXC6-204ENST00000509328 DNAJC25Q9H1X3 360 aa21.52■■□□□ 1.04
HOXC6-204ENST00000509328 DPEP3Q9H4B8 488 aa21.52■■□□□ 1.04
HOXC6-204ENST00000509328 FAM124BQ9H5Z6 455 aaPredicted RBP21.52■■□□□ 1.04
HOXC6-204ENST00000509328 HCFC1R1Q9NWW0 138 aa21.52■■□□□ 1.04
HOXC6-204ENST00000509328 CEP72Q9P209 647 aa21.52■■□□□ 1.04
HOXC6-204ENST00000509328 USTQ9Y2C2 406 aa21.52■■□□□ 1.04
HOXC6-204ENST00000509328 MYH10P35580 1976 aa21.52■■□□□ 1.04
HOXC6-204ENST00000509328 SOAT2O75908 522 aa21.51■■□□□ 1.03
HOXC6-204ENST00000509328 NDST1P52848 882 aa21.51■■□□□ 1.03
HOXC6-204ENST00000509328 CCDC142Q17RM4 750 aa21.51■■□□□ 1.03
HOXC6-204ENST00000509328 PABPC1LQ4VXU2 614 aaKnown RBP21.51■■□□□ 1.03
HOXC6-204ENST00000509328 MDH1BQ5I0G3 518 aa21.51■■□□□ 1.03
HOXC6-204ENST00000509328 IQCEQ6IPM2 695 aa21.51■■□□□ 1.03
HOXC6-204ENST00000509328 GJD3Q8N144 294 aa21.51■■□□□ 1.03
HOXC6-204ENST00000509328 TTC39CQ8N584 583 aa21.51■■□□□ 1.03
HOXC6-204ENST00000509328 MYLPFQ96A32 169 aa21.51■■□□□ 1.03
HOXC6-204ENST00000509328 COL25A1Q9BXS0 654 aaPredicted RBP21.51■■□□□ 1.03
HOXC6-204ENST00000509328 AVENQ9NQS1 362 aaPredicted RBP21.51■■□□□ 1.03
HOXC6-204ENST00000509328 SAMSN1Q9NSI8 373 aaKnown RBP21.51■■□□□ 1.03
HOXC6-204ENST00000509328 ASB3Q9Y575 518 aa21.51■■□□□ 1.03
HOXC6-204ENST00000509328 KCNJ18B7U540 433 aa21.5■■□□□ 1.03
HOXC6-204ENST00000509328 RHOP08100 348 aa21.5■■□□□ 1.03
HOXC6-204ENST00000509328 TRIM21P19474 475 aaKnown RBP21.5■■□□□ 1.03
HOXC6-204ENST00000509328 FSHRP23945 695 aa21.5■■□□□ 1.03
HOXC6-204ENST00000509328 CYP2F1P24903 491 aa21.5■■□□□ 1.03
HOXC6-204ENST00000509328 SSTR3P32745 418 aaPredicted RBP21.5■■□□□ 1.03
HOXC6-204ENST00000509328 MAGEA11P43364 429 aa21.5■■□□□ 1.03
HOXC6-204ENST00000509328 NTHL1P78549 312 aa21.5■■□□□ 1.03
HOXC6-204ENST00000509328 CYP27A1Q02318 531 aa21.5■■□□□ 1.03
HOXC6-204ENST00000509328 KCNJ12Q14500 433 aa21.5■■□□□ 1.03
HOXC6-204ENST00000509328 VEPH1Q14D04 833 aa21.5■■□□□ 1.03
HOXC6-204ENST00000509328 MAN2A1Q16706 1144 aa21.5■■□□□ 1.03
HOXC6-204ENST00000509328 OTOP3Q7RTS5 596 aa21.5■■□□□ 1.03
HOXC6-204ENST00000509328 TDRD5Q8NAT2 981 aaKnown RBP21.5■■□□□ 1.03
HOXC6-204ENST00000509328 LMO3Q8TAP4 145 aa21.5■■□□□ 1.03
HOXC6-204ENST00000509328 ACSF2Q96CM8 615 aaPredicted RBP21.5■■□□□ 1.03
HOXC6-204ENST00000509328 PCED1BQ96HM7 432 aa21.5■■□□□ 1.03
HOXC6-204ENST00000509328 NT5C1BQ96P26 610 aa21.5■■□□□ 1.03
HOXC6-204ENST00000509328 CORO1BQ9BR76 489 aa21.5■■□□□ 1.03
HOXC6-204ENST00000509328 DNAI2Q9GZS0 605 aa21.5■■□□□ 1.03
HOXC6-204ENST00000509328 NAT10Q9H0A0 1025 aaKnown RBP21.5■■□□□ 1.03
HOXC6-204ENST00000509328 GREB1Q4ZG55 1949 aa21.5■■□□□ 1.03
HOXC6-204ENST00000509328 NCOR1O75376 2440 aa21.49■■□□□ 1.03
HOXC6-204ENST00000509328 CILPO75339 1184 aa21.49■■□□□ 1.03
HOXC6-204ENST00000509328 ATF6P18850 670 aa21.49■■□□□ 1.03
HOXC6-204ENST00000509328 CD58P19256 250 aa21.49■■□□□ 1.03
HOXC6-204ENST00000509328 TBXAS1P24557 533 aaPredicted RBP21.49■■□□□ 1.03
HOXC6-204ENST00000509328 EEF1GP26641 437 aaKnown RBP21.49■■□□□ 1.03
HOXC6-204ENST00000509328 RPL10AP62906 217 aaKnown RBP21.49■■□□□ 1.03
HOXC6-204ENST00000509328 MYL5Q02045 173 aa21.49■■□□□ 1.03
HOXC6-204ENST00000509328 HSP90AA4PQ58FG1 418 aa21.49■■□□□ 1.03
HOXC6-204ENST00000509328 ACOT1Q86TX2 421 aa21.49■■□□□ 1.03
HOXC6-204ENST00000509328 ITIH5Q86UX2 942 aa21.49■■□□□ 1.03
HOXC6-204ENST00000509328 CRYBG2Q8N1P7 616 aa21.49■■□□□ 1.03
HOXC6-204ENST00000509328 LEMD2Q8NC56 503 aa21.49■■□□□ 1.03
HOXC6-204ENST00000509328 EHBP1Q8NDI1 1231 aa21.49■■□□□ 1.03
HOXC6-204ENST00000509328 FAM200AQ8TCP9 573 aa21.49■■□□□ 1.03
HOXC6-204ENST00000509328 LPIN3Q9BQK8 851 aa21.49■■□□□ 1.03
HOXC6-204ENST00000509328 TUBGCP2Q9BSJ2 902 aa21.49■■□□□ 1.03
HOXC6-204ENST00000509328 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.49■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms