RNA–Protein interactions for RNA: ENST00000509084.1

RFC1-211, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-211ENST00000509084 HEXIM2Q96MH2 286 aaKnown RBP11.03□□□□□ -0.64
RFC1-211ENST00000509084 NOX5Q96PH1 765 aa11.03□□□□□ -0.64
RFC1-211ENST00000509084 TWNKQ96RR1 684 aa11.03□□□□□ -0.64
RFC1-211ENST00000509084 HERC2P3Q9BVR0 1158 aa11.03□□□□□ -0.64
RFC1-211ENST00000509084 TMEM121BQ9BXQ6 578 aaPredicted RBP11.03□□□□□ -0.64
RFC1-211ENST00000509084 TSGA10Q9BZW7 698 aa11.03□□□□□ -0.64
RFC1-211ENST00000509084 KCND1Q9NSA2 647 aa11.03□□□□□ -0.64
RFC1-211ENST00000509084 HCSTQ9UBK5 93 aa11.03□□□□□ -0.64
RFC1-211ENST00000509084 HESX1Q9UBX0 185 aa11.03□□□□□ -0.64
RFC1-211ENST00000509084 HMGXB4Q9UGU5 601 aa11.03□□□□□ -0.64
RFC1-211ENST00000509084 NAGPAQ9UK23 515 aa11.03□□□□□ -0.64
RFC1-211ENST00000509084 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.03□□□□□ -0.64
RFC1-211ENST00000509084 A0A087X0T9 212 aa11.02□□□□□ -0.65
RFC1-211ENST00000509084 I3L4J1 428 aa11.02□□□□□ -0.65
RFC1-211ENST00000509084 O00370 1275 aa11.02□□□□□ -0.65
RFC1-211ENST00000509084 OAZ2O95190 189 aa11.02□□□□□ -0.65
RFC1-211ENST00000509084 SOD2P04179 222 aa11.02□□□□□ -0.65
RFC1-211ENST00000509084 CYP1A1P04798 512 aaPredicted RBP11.02□□□□□ -0.65
RFC1-211ENST00000509084 FAM228BP0C875 321 aa11.02□□□□□ -0.65
RFC1-211ENST00000509084 SETSIPP0DME0 302 aa11.02□□□□□ -0.65
RFC1-211ENST00000509084 PTPN1P18031 435 aaKnown RBP11.02□□□□□ -0.65
RFC1-211ENST00000509084 BRD2P25440 801 aaKnown RBP11.02□□□□□ -0.65
RFC1-211ENST00000509084 TKTP29401 623 aaKnown RBP11.02□□□□□ -0.65
RFC1-211ENST00000509084 CDH5P33151 784 aaPredicted RBP11.02□□□□□ -0.65
RFC1-211ENST00000509084 NSFP46459 744 aaKnown RBP11.02□□□□□ -0.65
RFC1-211ENST00000509084 VAV2P52735 878 aa11.02□□□□□ -0.65
RFC1-211ENST00000509084 SLC8A3P57103 927 aa11.02□□□□□ -0.65
RFC1-211ENST00000509084 CREMQ03060 361 aa11.02□□□□□ -0.65
RFC1-211ENST00000509084 KRT17Q04695 432 aa11.02□□□□□ -0.65
RFC1-211ENST00000509084 GFPT1Q06210 699 aaPredicted RBP11.02□□□□□ -0.65
RFC1-211ENST00000509084 SMARCB1Q12824 385 aa11.02□□□□□ -0.65
RFC1-211ENST00000509084 MTF1Q14872 753 aa11.02□□□□□ -0.65
RFC1-211ENST00000509084 CNGA2Q16280 664 aa11.02□□□□□ -0.65
RFC1-211ENST00000509084 CLEC16AQ2KHT3 1053 aa11.02□□□□□ -0.65
RFC1-211ENST00000509084 INTS6LQ5JSJ4 861 aaKnown RBP11.02□□□□□ -0.65
RFC1-211ENST00000509084 CCDC122Q5T0U0 273 aa11.02□□□□□ -0.65
RFC1-211ENST00000509084 FAM171A1Q5VUB5 890 aa11.02□□□□□ -0.65
RFC1-211ENST00000509084 LCLAT1Q6UWP7 414 aa11.02□□□□□ -0.65
RFC1-211ENST00000509084 KIAA1328Q86T90 577 aa11.02□□□□□ -0.65
RFC1-211ENST00000509084 DCP1BQ8IZD4 617 aaKnown RBP11.02□□□□□ -0.65
RFC1-211ENST00000509084 TMEM35BQ8NCS4 154 aa11.02□□□□□ -0.65
RFC1-211ENST00000509084 SLC30A5Q8TAD4 765 aa11.02□□□□□ -0.65
RFC1-211ENST00000509084 LNX1Q8TBB1 728 aaPredicted RBP11.02□□□□□ -0.65
RFC1-211ENST00000509084 KIAA1524Q8TCG1 905 aa11.02□□□□□ -0.65
RFC1-211ENST00000509084 TRIM11Q96F44 468 aa11.02□□□□□ -0.65
RFC1-211ENST00000509084 SAMD11Q96NU1 681 aa11.02□□□□□ -0.65
RFC1-211ENST00000509084 GDF15Q99988 308 aa11.02□□□□□ -0.65
RFC1-211ENST00000509084 TTPALQ9BTX7 342 aa11.02□□□□□ -0.65
RFC1-211ENST00000509084 PLVAPQ9BX97 442 aa11.02□□□□□ -0.65
RFC1-211ENST00000509084 GPR62Q9BZJ7 368 aa11.02□□□□□ -0.65
RFC1-211ENST00000509084 UBE2OQ9C0C9 1292 aaKnown RBP11.02□□□□□ -0.65
RFC1-211ENST00000509084 LHX5Q9H2C1 402 aa11.02□□□□□ -0.65
RFC1-211ENST00000509084 ACP6Q9NPH0 428 aa11.02□□□□□ -0.65
RFC1-211ENST00000509084 SPTLC3Q9NUV7 552 aa11.02□□□□□ -0.65
RFC1-211ENST00000509084 INTUQ9ULD6 942 aa11.02□□□□□ -0.65
RFC1-211ENST00000509084 PYCARDQ9ULZ3 195 aa11.02□□□□□ -0.65
RFC1-211ENST00000509084 SSX2IPQ9Y2D8 614 aa11.02□□□□□ -0.65
RFC1-211ENST00000509084 TIMM13Q9Y5L4 95 aaPredicted RBP11.02□□□□□ -0.65
RFC1-211ENST00000509084 ADGRG1Q9Y653 693 aa11.02□□□□□ -0.65
RFC1-211ENST00000509084 KIAA1671Q9BY89 1806 aa11.02□□□□□ -0.65
RFC1-211ENST00000509084 NT5C1B-RDH14C9J2C7 533 aa11.01□□□□□ -0.65
RFC1-211ENST00000509084 F8W810 466 aa11.01□□□□□ -0.65
RFC1-211ENST00000509084 M0QYV0 167 aa11.01□□□□□ -0.65
RFC1-211ENST00000509084 RTN2O75298 545 aa11.01□□□□□ -0.65
RFC1-211ENST00000509084 EFEMP2O95967 443 aa11.01□□□□□ -0.65
RFC1-211ENST00000509084 PDGFRBP09619 1106 aa11.01□□□□□ -0.65
RFC1-211ENST00000509084 H2AFZP0C0S5 128 aa11.01□□□□□ -0.65
RFC1-211ENST00000509084 UNGP13051 313 aaPredicted RBP11.01□□□□□ -0.65
RFC1-211ENST00000509084 CHRNB2P17787 502 aa11.01□□□□□ -0.65
RFC1-211ENST00000509084 IGFBP6P24592 240 aaPredicted RBP11.01□□□□□ -0.65
RFC1-211ENST00000509084 LMO2P25791 158 aa11.01□□□□□ -0.65
RFC1-211ENST00000509084 PBX3P40426 434 aa11.01□□□□□ -0.65
RFC1-211ENST00000509084 MAGEA1P43355 309 aa11.01□□□□□ -0.65
RFC1-211ENST00000509084 GLUD2P49448 558 aa11.01□□□□□ -0.65
RFC1-211ENST00000509084 BCAT1P54687 386 aa11.01□□□□□ -0.65
RFC1-211ENST00000509084 SNX16P57768 344 aa11.01□□□□□ -0.65
RFC1-211ENST00000509084 NOMO3P69849 1222 aa11.01□□□□□ -0.65
RFC1-211ENST00000509084 PLCB3Q01970 1234 aa11.01□□□□□ -0.65
RFC1-211ENST00000509084 CENPCQ03188 943 aa11.01□□□□□ -0.65
RFC1-211ENST00000509084 MRPL58Q14197 206 aaKnown RBP11.01□□□□□ -0.65
RFC1-211ENST00000509084 SHHQ15465 462 aa11.01□□□□□ -0.65
RFC1-211ENST00000509084 NFE2Q16621 373 aaPredicted RBP11.01□□□□□ -0.65
RFC1-211ENST00000509084 VARS2Q5ST30 1063 aaKnown RBP11.01□□□□□ -0.65
RFC1-211ENST00000509084 KIAA1841Q6NSI8 718 aa11.01□□□□□ -0.65
RFC1-211ENST00000509084 C4orf50Q6ZRC1 276 aa11.01□□□□□ -0.65
RFC1-211ENST00000509084 ZNF662Q6ZS27 426 aa11.01□□□□□ -0.65
RFC1-211ENST00000509084 TOGARAM2Q6ZUX3 1019 aa11.01□□□□□ -0.65
RFC1-211ENST00000509084 H2AFVQ71UI9 128 aa11.01□□□□□ -0.65
RFC1-211ENST00000509084 DDX53Q86TM3 631 aaKnown RBP11.01□□□□□ -0.65
RFC1-211ENST00000509084 OLIG1Q8TAK6 271 aa11.01□□□□□ -0.65
RFC1-211ENST00000509084 PIK3R5Q8WYR1 880 aa11.01□□□□□ -0.65
RFC1-211ENST00000509084 TFAP2BQ92481 460 aa11.01□□□□□ -0.65
RFC1-211ENST00000509084 CYFIP2Q96F07 1278 aa11.01□□□□□ -0.65
RFC1-211ENST00000509084 VCPIP1Q96JH7 1222 aa11.01□□□□□ -0.65
RFC1-211ENST00000509084 HNRNPABQ99729 332 aaKnown RBP11.01□□□□□ -0.65
RFC1-211ENST00000509084 DESI2Q9BSY9 194 aa11.01□□□□□ -0.65
RFC1-211ENST00000509084 MIS12Q9H081 205 aa11.01□□□□□ -0.65
RFC1-211ENST00000509084 ISCUQ9H1K1 167 aa11.01□□□□□ -0.65
RFC1-211ENST00000509084 DPEP3Q9H4B8 488 aa11.01□□□□□ -0.65
RFC1-211ENST00000509084 TSPAN16Q9UKR8 245 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms