RNA–Protein interactions for RNA: ENST00000508895.5

SNCA-211, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SNCA, Length 905 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-211ENST00000508895 CA14Q9ULX7 337 aa9.31□□□□□ -0.92
SNCA-211ENST00000508895 NUP210Q8TEM1 1887 aaPredicted RBP9.31□□□□□ -0.92
SNCA-211ENST00000508895 CFAP47Q6ZTR5 3102 aa9.31□□□□□ -0.92
SNCA-211ENST00000508895 MYOFQ9NZM1 2061 aa9.3□□□□□ -0.92
SNCA-211ENST00000508895 MYBPHLA2RUH7 354 aa9.3□□□□□ -0.92
SNCA-211ENST00000508895 GABRDO14764 452 aa9.3□□□□□ -0.92
SNCA-211ENST00000508895 MAPK13O15264 365 aa9.3□□□□□ -0.92
SNCA-211ENST00000508895 XYLBO75191 536 aa9.3□□□□□ -0.92
SNCA-211ENST00000508895 LRG1P02750 347 aa9.3□□□□□ -0.92
SNCA-211ENST00000508895 ODC1P11926 461 aa9.3□□□□□ -0.92
SNCA-211ENST00000508895 MYL4P12829 197 aa9.3□□□□□ -0.92
SNCA-211ENST00000508895 GLULP15104 373 aa9.3□□□□□ -0.92
SNCA-211ENST00000508895 PTPN2P17706 415 aa9.3□□□□□ -0.92
SNCA-211ENST00000508895 AVPR2P30518 371 aa9.3□□□□□ -0.92
SNCA-211ENST00000508895 ELF1P32519 619 aa9.3□□□□□ -0.92
SNCA-211ENST00000508895 PPP1R2P41236 205 aa9.3□□□□□ -0.92
SNCA-211ENST00000508895 CACNA2D1P54289 1103 aa9.3□□□□□ -0.92
SNCA-211ENST00000508895 EPHA5P54756 1037 aa9.3□□□□□ -0.92
SNCA-211ENST00000508895 NLRP12P59046 1061 aa9.3□□□□□ -0.92
SNCA-211ENST00000508895 MYL6P60660 151 aa9.3□□□□□ -0.92
SNCA-211ENST00000508895 MYBPC2Q14324 1141 aa9.3□□□□□ -0.92
SNCA-211ENST00000508895 TDRD10Q5VZ19 366 aaKnown RBP9.3□□□□□ -0.92
SNCA-211ENST00000508895 CEP135Q66GS9 1140 aa9.3□□□□□ -0.92
SNCA-211ENST00000508895 FOXR2Q6PJQ5 311 aa9.3□□□□□ -0.92
SNCA-211ENST00000508895 USP37Q86T82 979 aa9.3□□□□□ -0.92
SNCA-211ENST00000508895 NT5DC4Q86YG4 428 aa9.3□□□□□ -0.92
SNCA-211ENST00000508895 WDR49Q8IV35 697 aa9.3□□□□□ -0.92
SNCA-211ENST00000508895 SIX5Q8N196 739 aa9.3□□□□□ -0.92
SNCA-211ENST00000508895 RIN3Q8TB24 985 aa9.3□□□□□ -0.92
SNCA-211ENST00000508895 PI4K2AQ9BTU6 479 aa9.3□□□□□ -0.92
SNCA-211ENST00000508895 DPEP3Q9H4B8 488 aa9.3□□□□□ -0.92
SNCA-211ENST00000508895 KIAA1586Q9HCI6 787 aa9.3□□□□□ -0.92
SNCA-211ENST00000508895 CRTAC1Q9NQ79 661 aa9.3□□□□□ -0.92
SNCA-211ENST00000508895 AVENQ9NQS1 362 aaPredicted RBP9.3□□□□□ -0.92
SNCA-211ENST00000508895 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.3□□□□□ -0.922e-6■■■■■ 149.1
SNCA-211ENST00000508895 GDAP2Q9NXN4 497 aa9.3□□□□□ -0.92
SNCA-211ENST00000508895 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.3□□□□□ -0.92
SNCA-211ENST00000508895 ITGA11Q9UKX5 1188 aa9.3□□□□□ -0.92
SNCA-211ENST00000508895 MRPS23Q9Y3D9 190 aaKnown RBP9.3□□□□□ -0.92
SNCA-211ENST00000508895 MTF2Q9Y483 593 aaPredicted RBP9.3□□□□□ -0.92
SNCA-211ENST00000508895 SNX9Q9Y5X1 595 aa9.3□□□□□ -0.92
SNCA-211ENST00000508895 VPS13AQ96RL7 3174 aa9.29□□□□□ -0.92
SNCA-211ENST00000508895 A0A1W2PRU2 124 aa9.29□□□□□ -0.92
SNCA-211ENST00000508895 SLC16A3O15427 465 aaKnown RBP9.29□□□□□ -0.92
SNCA-211ENST00000508895 TADA3O75528 432 aa9.29□□□□□ -0.92
SNCA-211ENST00000508895 C4BPAP04003 597 aaKnown RBP9.29□□□□□ -0.92
SNCA-211ENST00000508895 TMEM191BP0C7N4 346 aa9.29□□□□□ -0.92
SNCA-211ENST00000508895 TRIM49P0CI25 452 aa9.29□□□□□ -0.92
SNCA-211ENST00000508895 TRIM49CP0CI26 452 aa9.29□□□□□ -0.92
SNCA-211ENST00000508895 HAPLN1P10915 354 aaPredicted RBP9.29□□□□□ -0.92
SNCA-211ENST00000508895 HMGA1P17096 107 aaKnown RBP9.29□□□□□ -0.92
SNCA-211ENST00000508895 PTMSP20962 102 aa9.29□□□□□ -0.92
SNCA-211ENST00000508895 CD72P21854 359 aa9.29□□□□□ -0.92
SNCA-211ENST00000508895 CYP2F1P24903 491 aa9.29□□□□□ -0.92
SNCA-211ENST00000508895 RAP1GAPP47736 663 aa9.29□□□□□ -0.92
SNCA-211ENST00000508895 CDH8P55286 799 aa9.29□□□□□ -0.92
SNCA-211ENST00000508895 STX17P56962 302 aa9.29□□□□□ -0.92
SNCA-211ENST00000508895 PSMC1P62191 440 aaKnown RBP9.29□□□□□ -0.92
SNCA-211ENST00000508895 CLDN10P78369 228 aa9.29□□□□□ -0.92
SNCA-211ENST00000508895 RBP5P82980 135 aa9.29□□□□□ -0.92
SNCA-211ENST00000508895 CYP4F8P98187 520 aa9.29□□□□□ -0.92
SNCA-211ENST00000508895 ADAM9Q13443 819 aa9.29□□□□□ -0.92
SNCA-211ENST00000508895 GRM2Q14416 872 aa9.29□□□□□ -0.92
SNCA-211ENST00000508895 NFKBIBQ15653 356 aa9.29□□□□□ -0.92
SNCA-211ENST00000508895 DDR2Q16832 855 aa9.29□□□□□ -0.92
SNCA-211ENST00000508895 SV2CQ496J9 727 aa9.29□□□□□ -0.92
SNCA-211ENST00000508895 WDR44Q5JSH3 913 aa9.29□□□□□ -0.92
SNCA-211ENST00000508895 SPOPLQ6IQ16 392 aa9.29□□□□□ -0.92
SNCA-211ENST00000508895 C11orf57Q6ZUT1 292 aaPredicted RBP9.29□□□□□ -0.92
SNCA-211ENST00000508895 DNAJB7Q7Z6W7 309 aaPredicted RBP9.29□□□□□ -0.92
SNCA-211ENST00000508895 FAM186BQ8IYM0 893 aa9.29□□□□□ -0.92
SNCA-211ENST00000508895 UBALD2Q8IYN6 164 aa9.29□□□□□ -0.92
SNCA-211ENST00000508895 LRRC52Q8N7C0 313 aa9.29□□□□□ -0.92
SNCA-211ENST00000508895 PARD3BQ8TEW8 1205 aa9.29□□□□□ -0.92
SNCA-211ENST00000508895 HPDLQ96IR7 371 aa9.29□□□□□ -0.92
SNCA-211ENST00000508895 SEPT5Q99719 369 aaPredicted RBP9.29□□□□□ -0.92
SNCA-211ENST00000508895 TSG101Q99816 390 aa9.29□□□□□ -0.92
SNCA-211ENST00000508895 FOXQ1Q9C009 403 aa9.29□□□□□ -0.92
SNCA-211ENST00000508895 SMG9Q9H0W8 520 aaKnown RBP9.29□□□□□ -0.92
SNCA-211ENST00000508895 FAM86C1Q9NVL1 165 aa9.29□□□□□ -0.92
SNCA-211ENST00000508895 DDX43Q9NXZ2 648 aaKnown RBP9.29□□□□□ -0.92
SNCA-211ENST00000508895 ABI2Q9NYB9 513 aaPredicted RBP9.29□□□□□ -0.92
SNCA-211ENST00000508895 IGSF9Q9P2J2 1179 aa9.29□□□□□ -0.92
SNCA-211ENST00000508895 DPP7Q9UHL4 492 aa9.29□□□□□ -0.92
SNCA-211ENST00000508895 GTF3C4Q9UKN8 822 aa9.29□□□□□ -0.92
SNCA-211ENST00000508895 BICDL2A1A5D9 508 aa9.28□□□□□ -0.92
SNCA-211ENST00000508895 PRAMEF12O95522 483 aa9.28□□□□□ -0.92
SNCA-211ENST00000508895 PDGFRBP09619 1106 aa9.28□□□□□ -0.92
SNCA-211ENST00000508895 SRFP11831 508 aa9.28□□□□□ -0.92
SNCA-211ENST00000508895 RPL13P26373 211 aaKnown RBP9.28□□□□□ -0.92
SNCA-211ENST00000508895 HOXC13P31276 330 aa9.28□□□□□ -0.92
SNCA-211ENST00000508895 MCCD1P59942 119 aaPredicted RBP9.28□□□□□ -0.92
SNCA-211ENST00000508895 FKBP3Q00688 224 aaKnown RBP9.28□□□□□ -0.92
SNCA-211ENST00000508895 TYRO3Q06418 890 aa9.28□□□□□ -0.92
SNCA-211ENST00000508895 PPP3CAQ08209 521 aa9.28□□□□□ -0.92
SNCA-211ENST00000508895 ORC1Q13415 861 aa9.28□□□□□ -0.92
SNCA-211ENST00000508895 SURF1Q15526 300 aa9.28□□□□□ -0.92
SNCA-211ENST00000508895 STX1AQ16623 288 aa9.28□□□□□ -0.92
SNCA-211ENST00000508895 DUOXA2Q1HG44 320 aa9.28□□□□□ -0.92
SNCA-211ENST00000508895 INTS6LQ5JSJ4 861 aaKnown RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms