RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 MEFVO15553 781 aaPredicted RBP4.13□□□□□ -1.75
NEDD4-209ENST00000508871 IL15P40933 162 aaPredicted RBP4.13□□□□□ -1.75
NEDD4-209ENST00000508871 SCTRP47872 440 aa4.13□□□□□ -1.75
NEDD4-209ENST00000508871 CSE1LP55060 971 aaKnown RBP4.13□□□□□ -1.75
NEDD4-209ENST00000508871 NRG1Q02297 640 aaPredicted RBP4.13□□□□□ -1.75
NEDD4-209ENST00000508871 SLC20A2Q08357 652 aa4.13□□□□□ -1.75
NEDD4-209ENST00000508871 C19orf57Q0VDD7 668 aa4.13□□□□□ -1.75
NEDD4-209ENST00000508871 IFT88Q13099 833 aa4.13□□□□□ -1.75
NEDD4-209ENST00000508871 HADHQ16836 314 aaKnown RBP4.13□□□□□ -1.75
NEDD4-209ENST00000508871 BROXQ5VW32 411 aa4.13□□□□□ -1.75
NEDD4-209ENST00000508871 UNC5AQ6ZN44 842 aa4.13□□□□□ -1.75
NEDD4-209ENST00000508871 PRICKLE2Q7Z3G6 844 aa4.13□□□□□ -1.75
NEDD4-209ENST00000508871 MIER3Q7Z3K6 550 aa4.13□□□□□ -1.75
NEDD4-209ENST00000508871 PLD3Q8IV08 490 aa4.13□□□□□ -1.75
NEDD4-209ENST00000508871 PHC2Q8IXK0 858 aa4.13□□□□□ -1.75
NEDD4-209ENST00000508871 OR2C3Q8N628 320 aa4.13□□□□□ -1.75
NEDD4-209ENST00000508871 KCNE4Q8WWG9 221 aa4.13□□□□□ -1.75
NEDD4-209ENST00000508871 CPT1BQ92523 772 aa4.13□□□□□ -1.75
NEDD4-209ENST00000508871 TP53INP1Q96A56 240 aa4.13□□□□□ -1.75
NEDD4-209ENST00000508871 HAUS4Q9H6D7 363 aa4.13□□□□□ -1.75
NEDD4-209ENST00000508871 TMEM161AQ9NX61 479 aa4.13□□□□□ -1.75
NEDD4-209ENST00000508871 PCDHGA2Q9Y5H1 932 aa4.13□□□□□ -1.75
NEDD4-209ENST00000508871 PCDHA2Q9Y5H9 948 aa4.13□□□□□ -1.75
NEDD4-209ENST00000508871 ECM29Q5VYK3 1845 aa4.13□□□□□ -1.75
NEDD4-209ENST00000508871 A0A1W2PQH9 124 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 DCDC2CA8MYV0 355 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 H0Y626 953 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 GCOM1H8Y6P7 765 aaPredicted RBP4.12□□□□□ -1.75
NEDD4-209ENST00000508871 TNPO2O14787 897 aaKnown RBP4.12□□□□□ -1.75
NEDD4-209ENST00000508871 NCK2O43639 380 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 ZBTB14O43829 449 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 CYP11A1P05108 521 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 CLEC3BP05452 202 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 IVLP07476 585 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 POLR2MP0CAP2 368 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 NCF1P14598 390 aaPredicted RBP4.12□□□□□ -1.75
NEDD4-209ENST00000508871 PTPN12Q05209 780 aaKnown RBP4.12□□□□□ -1.75
NEDD4-209ENST00000508871 DMPKQ09013 629 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 TRDNQ13061 729 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 SLC39A6Q13433 755 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 CUL2Q13617 745 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 UAP1Q16222 522 aaPredicted RBP4.12□□□□□ -1.75
NEDD4-209ENST00000508871 ZNF805Q5CZA5 627 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 FAM205BPQ63HN1 556 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 MICU3Q86XE3 530 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 CSGALNACT1Q8TDX6 532 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 DEPDC1BQ8WUY9 529 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 HIC2Q96JB3 615 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 TCEANC2Q96MN5 208 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 ESYT1Q9BSJ8 1104 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 DDX47Q9H0S4 455 aaKnown RBP4.12□□□□□ -1.75
NEDD4-209ENST00000508871 C12orf65Q9H3J6 166 aaKnown RBP4.12□□□□□ -1.75
NEDD4-209ENST00000508871 CLIP2Q9UDT6 1046 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 DDX60LQ5H9U9 1706 aaKnown RBP4.12□□□□□ -1.75
NEDD4-209ENST00000508871 SH3TC1Q8TE82 1336 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 PIPSLA2A3N6 862 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 SCDO00767 359 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 PGRMC2O15173 223 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 HTR3BO95264 441 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 MT-ATP6P00846 226 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 FCGR1AP12314 374 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 PAX7P23759 505 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 HTR1BP28222 390 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 MMP14P50281 582 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 SMTNP53814 917 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 BCAT1P54687 386 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 NME5P56597 212 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 MXRA7P84157 204 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 MPP1Q00013 466 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 NFIAQ12857 509 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 SQLEQ14534 574 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 RBBP5Q15291 538 aaKnown RBP4.12□□□□□ -1.75
NEDD4-209ENST00000508871 MED22Q15528 200 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 CT83Q5H943 113 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 ZNF771Q7L3S4 317 aaPredicted RBP4.12□□□□□ -1.75
NEDD4-209ENST00000508871 EPM2AIP1Q7L775 607 aaPredicted RBP4.12□□□□□ -1.75
NEDD4-209ENST00000508871 ZNF34Q8IZ26 560 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 SMC1BQ8NDV3 1235 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 GATAD2BQ8WXI9 593 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 RGMAQ96B86 450 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 C1GALT1C1Q96EU7 318 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 KCNC2Q96PR1 638 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 RIBC2Q9H4K1 309 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 DPP7Q9UHL4 492 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 TRIM33Q9UPN9 1127 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 POLHQ9Y253 713 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 ZNF646O15015 1829 aaPredicted RBP4.12□□□□□ -1.75
NEDD4-209ENST00000508871 DENND3A2RUS2 1198 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 MTRF1O75570 445 aaKnown RBP4.12□□□□□ -1.75
NEDD4-209ENST00000508871 ACTN1P12814 892 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 ATP5JP18859 108 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 DLG4P78352 724 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 SRSF2Q01130 221 aaKnown RBP4.12□□□□□ -1.75
NEDD4-209ENST00000508871 PAK1Q13153 545 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 SNW1Q13573 536 aaKnown RBP4.12□□□□□ -1.75
NEDD4-209ENST00000508871 LVRNQ6Q4G3 990 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 TTC13Q8NBP0 860 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 GALNT6Q8NCL4 622 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 GRK7Q8WTQ7 553 aa4.12□□□□□ -1.75
NEDD4-209ENST00000508871 TMEM40Q8WWA1 233 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms