RNA–Protein interactions for RNA: ENST00000508809.1

COL4A3BP-206, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2

Gene COL4A3BP, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-206ENST00000508809 GDE1Q9NZC3 331 aa9.48□□□□□ -0.89
COL4A3BP-206ENST00000508809 DNMT3BQ9UBC3 853 aaKnown RBP9.48□□□□□ -0.89
COL4A3BP-206ENST00000508809 ORC3Q9UBD5 711 aaPredicted RBP9.48□□□□□ -0.89
COL4A3BP-206ENST00000508809 MTRRQ9UBK8 725 aa9.48□□□□□ -0.89
COL4A3BP-206ENST00000508809 TPCN1Q9ULQ1 816 aa9.48□□□□□ -0.89
COL4A3BP-206ENST00000508809 BACE2Q9Y5Z0 518 aa9.48□□□□□ -0.89
COL4A3BP-206ENST00000508809 COL4A3Q01955 1670 aa9.48□□□□□ -0.89
COL4A3BP-206ENST00000508809 A0A087WWV3 80 aa9.47□□□□□ -0.89
COL4A3BP-206ENST00000508809 LRRIQ4A6NIV6 560 aa9.47□□□□□ -0.89
COL4A3BP-206ENST00000508809 N4BP3O15049 544 aa9.47□□□□□ -0.89
COL4A3BP-206ENST00000508809 CCL16O15467 120 aa9.47□□□□□ -0.89
COL4A3BP-206ENST00000508809 ECI2O75521 394 aa9.47□□□□□ -0.89
COL4A3BP-206ENST00000508809 RECQL4O94761 1208 aa9.47□□□□□ -0.89
COL4A3BP-206ENST00000508809 SDHBP21912 280 aa9.47□□□□□ -0.89
COL4A3BP-206ENST00000508809 TGM1P22735 817 aa9.47□□□□□ -0.89
COL4A3BP-206ENST00000508809 OR1D2P34982 312 aa9.47□□□□□ -0.89
COL4A3BP-206ENST00000508809 KRT2P35908 639 aa9.47□□□□□ -0.89
COL4A3BP-206ENST00000508809 RPS9P46781 194 aaKnown RBP9.47□□□□□ -0.89
COL4A3BP-206ENST00000508809 CSTF1Q05048 431 aaKnown RBP9.47□□□□□ -0.89
COL4A3BP-206ENST00000508809 RSPO4Q2I0M5 234 aaPredicted RBP9.47□□□□□ -0.89
COL4A3BP-206ENST00000508809 ZBTB41Q5SVQ8 909 aa9.47□□□□□ -0.89
COL4A3BP-206ENST00000508809 SHISA2Q6UWI4 295 aa9.47□□□□□ -0.89
COL4A3BP-206ENST00000508809 CATSPER3Q86XQ3 398 aa9.47□□□□□ -0.89
COL4A3BP-206ENST00000508809 ZBTB8OSQ8IWT0 167 aa9.47□□□□□ -0.89
COL4A3BP-206ENST00000508809 SLC7A14Q8TBB6 771 aa9.47□□□□□ -0.89
COL4A3BP-206ENST00000508809 HASPINQ8TF76 798 aa9.47□□□□□ -0.89
COL4A3BP-206ENST00000508809 ATRIPQ8WXE1 791 aa9.47□□□□□ -0.89
COL4A3BP-206ENST00000508809 WASF1Q92558 559 aa9.47□□□□□ -0.89
COL4A3BP-206ENST00000508809 PPP1R10Q96QC0 940 aaKnown RBP9.47□□□□□ -0.89
COL4A3BP-206ENST00000508809 CCDC113Q9H0I3 377 aa9.47□□□□□ -0.89
COL4A3BP-206ENST00000508809 MRPL18Q9H0U6 180 aaKnown RBP9.47□□□□□ -0.89
COL4A3BP-206ENST00000508809 C2orf40Q9H1Z8 148 aa9.47□□□□□ -0.89
COL4A3BP-206ENST00000508809 CHRDQ9H2X0 955 aa9.47□□□□□ -0.89
COL4A3BP-206ENST00000508809 SPATA6Q9NWH7 488 aaPredicted RBP9.47□□□□□ -0.89
COL4A3BP-206ENST00000508809 HCFC1R1Q9NWW0 138 aa9.47□□□□□ -0.89
COL4A3BP-206ENST00000508809 ZSCAN32Q9NX65 697 aa9.47□□□□□ -0.89
COL4A3BP-206ENST00000508809 CNOT1A5YKK6 2376 aaKnown RBP9.47□□□□□ -0.89
COL4A3BP-206ENST00000508809 KMT2BQ9UMN6 2715 aaPredicted RBP9.47□□□□□ -0.89
COL4A3BP-206ENST00000508809 ARHGEF37A1IGU5 675 aa9.46□□□□□ -0.9
COL4A3BP-206ENST00000508809 K7ELQ4 463 aaPredicted RBP9.46□□□□□ -0.9
COL4A3BP-206ENST00000508809 PDE2AO00408 941 aaPredicted RBP9.46□□□□□ -0.9
COL4A3BP-206ENST00000508809 EREGO14944 169 aa9.46□□□□□ -0.9
COL4A3BP-206ENST00000508809 NCAM2O15394 837 aa9.46□□□□□ -0.9
COL4A3BP-206ENST00000508809 USO1O60763 962 aaKnown RBP9.46□□□□□ -0.9
COL4A3BP-206ENST00000508809 ABLIM3O94929 683 aa9.46□□□□□ -0.9
COL4A3BP-206ENST00000508809 EDN1P05305 212 aa9.46□□□□□ -0.9
COL4A3BP-206ENST00000508809 ATP2B1P20020 1258 aa9.46□□□□□ -0.9
COL4A3BP-206ENST00000508809 CD72P21854 359 aa9.46□□□□□ -0.9
COL4A3BP-206ENST00000508809 IGFBP6P24592 240 aaPredicted RBP9.46□□□□□ -0.9
COL4A3BP-206ENST00000508809 TXKP42681 527 aa9.46□□□□□ -0.9
COL4A3BP-206ENST00000508809 PRPF4BQ13523 1007 aaKnown RBP9.46□□□□□ -0.9
COL4A3BP-206ENST00000508809 UBXN2BQ14CS0 331 aa9.46□□□□□ -0.9
COL4A3BP-206ENST00000508809 MAPK6Q16659 721 aa9.46□□□□□ -0.9
COL4A3BP-206ENST00000508809 UPP1Q16831 310 aa9.46□□□□□ -0.9
COL4A3BP-206ENST00000508809 PABPC1LQ4VXU2 614 aaKnown RBP9.46□□□□□ -0.9
COL4A3BP-206ENST00000508809 ALKAL1Q6UXT8 129 aa9.46□□□□□ -0.9
COL4A3BP-206ENST00000508809 ZNF852Q6ZMS4 543 aa9.46□□□□□ -0.9
COL4A3BP-206ENST00000508809 MAEAQ7L5Y9 396 aa9.46□□□□□ -0.9
COL4A3BP-206ENST00000508809 NOSTRINQ8IVI9 506 aa9.46□□□□□ -0.9
COL4A3BP-206ENST00000508809 BSNDQ8WZ55 320 aa9.46□□□□□ -0.9
COL4A3BP-206ENST00000508809 ELSPBP1Q96BH3 223 aa9.46□□□□□ -0.9
COL4A3BP-206ENST00000508809 KXD1Q9BQD3 176 aa9.46□□□□□ -0.9
COL4A3BP-206ENST00000508809 POLR3CQ9BUI4 534 aaPredicted RBP9.46□□□□□ -0.9
COL4A3BP-206ENST00000508809 FAM126AQ9BYI3 521 aaPredicted RBP9.46□□□□□ -0.9
COL4A3BP-206ENST00000508809 PLA2G2FQ9BZM2 168 aa9.46□□□□□ -0.9
COL4A3BP-206ENST00000508809 EPC1Q9H2F5 836 aa9.46□□□□□ -0.9
COL4A3BP-206ENST00000508809 BRMS1Q9HCU9 246 aa9.46□□□□□ -0.9
COL4A3BP-206ENST00000508809 TUFT1Q9NNX1 390 aa9.46□□□□□ -0.9
COL4A3BP-206ENST00000508809 FOXD3Q9UJU5 478 aaPredicted RBP9.46□□□□□ -0.9
COL4A3BP-206ENST00000508809 ZFHX4Q86UP3 3567 aa9.46□□□□□ -0.9
COL4A3BP-206ENST00000508809 CITO14578 2027 aa9.46□□□□□ -0.9
COL4A3BP-206ENST00000508809 RALGAPA1Q6GYQ0 2036 aa9.46□□□□□ -0.9
COL4A3BP-206ENST00000508809 PRR5-ARHGAP8B1AHC4 643 aa9.45□□□□□ -0.9
COL4A3BP-206ENST00000508809 BTBD18B2RXH4 712 aa9.45□□□□□ -0.9
COL4A3BP-206ENST00000508809 LINC01387J3KSC0 135 aa9.45□□□□□ -0.9
COL4A3BP-206ENST00000508809 TBC1D4O60343 1298 aa9.45□□□□□ -0.9
COL4A3BP-206ENST00000508809 NEMFO60524 1076 aa9.45□□□□□ -0.9
COL4A3BP-206ENST00000508809 DTNBO60941 627 aa9.45□□□□□ -0.9
COL4A3BP-206ENST00000508809 DEAF1O75398 565 aaPredicted RBP9.45□□□□□ -0.9
COL4A3BP-206ENST00000508809 MED24O75448 989 aa9.45□□□□□ -0.9
COL4A3BP-206ENST00000508809 B3GAT3O94766 335 aa9.45□□□□□ -0.9
COL4A3BP-206ENST00000508809 PRKCBP05771 671 aa9.45□□□□□ -0.9
COL4A3BP-206ENST00000508809 RHOP08100 348 aa9.45□□□□□ -0.9
COL4A3BP-206ENST00000508809 TDGF1P13385 188 aa9.45□□□□□ -0.9
COL4A3BP-206ENST00000508809 PTPN2P17706 415 aa9.45□□□□□ -0.9
COL4A3BP-206ENST00000508809 CYP11B2P19099 503 aa9.45□□□□□ -0.9
COL4A3BP-206ENST00000508809 NAMPTP43490 491 aa9.45□□□□□ -0.9
COL4A3BP-206ENST00000508809 ATXN1P54253 815 aaKnown RBP9.45□□□□□ -0.9
COL4A3BP-206ENST00000508809 ARHGAP8P85298 464 aa9.45□□□□□ -0.9
COL4A3BP-206ENST00000508809 ADCY1Q08828 1119 aa9.45□□□□□ -0.9
COL4A3BP-206ENST00000508809 DOC2BQ14184 412 aa9.45□□□□□ -0.9
COL4A3BP-206ENST00000508809 SLC5A9Q2M3M2 681 aa9.45□□□□□ -0.9
COL4A3BP-206ENST00000508809 DCAF4L1Q3SXM0 396 aa9.45□□□□□ -0.9
COL4A3BP-206ENST00000508809 XKR4Q5GH76 650 aa9.45□□□□□ -0.9
COL4A3BP-206ENST00000508809 NT5DC1Q5TFE4 455 aa9.45□□□□□ -0.9
COL4A3BP-206ENST00000508809 EEF1DP3Q658K8 133 aa9.45□□□□□ -0.9
COL4A3BP-206ENST00000508809 TANGO2Q6ICL3 276 aa9.45□□□□□ -0.9
COL4A3BP-206ENST00000508809 SLC8B1Q6J4K2 584 aa9.45□□□□□ -0.9
COL4A3BP-206ENST00000508809 ANKS3Q6ZW76 656 aa9.45□□□□□ -0.9
COL4A3BP-206ENST00000508809 ZNF461Q8TAF7 563 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms