RNA–Protein interactions for RNA: ENST00000508635.5

UBE2D3-226, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 587 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-226ENST00000508635 TRIM8Q9BZR9 551 aa4.18□□□□□ -1.74
UBE2D3-226ENST00000508635 HAPLN2Q9GZV7 340 aa4.18□□□□□ -1.74
UBE2D3-226ENST00000508635 QRSL1Q9H0R6 528 aaKnown RBP4.18□□□□□ -1.74
UBE2D3-226ENST00000508635 DHX36Q9H2U1 1008 aaKnown RBP4.18□□□□□ -1.74
UBE2D3-226ENST00000508635 DCTPP1Q9H773 170 aa4.18□□□□□ -1.74
UBE2D3-226ENST00000508635 SEC61A2Q9H9S3 476 aa4.18□□□□□ -1.74
UBE2D3-226ENST00000508635 IL1RAPL2Q9NP60 686 aa4.18□□□□□ -1.74
UBE2D3-226ENST00000508635 PI4KBQ9UBF8 816 aa4.18□□□□□ -1.74
UBE2D3-226ENST00000508635 DPP7Q9UHL4 492 aa4.18□□□□□ -1.74
UBE2D3-226ENST00000508635 EVLQ9UI08 416 aaPredicted RBP4.18□□□□□ -1.74
UBE2D3-226ENST00000508635 PRSS50Q9UI38 385 aa4.18□□□□□ -1.74
UBE2D3-226ENST00000508635 CPA4Q9UI42 421 aa4.18□□□□□ -1.74
UBE2D3-226ENST00000508635 HERC5Q9UII4 1024 aaKnown RBP4.18□□□□□ -1.74
UBE2D3-226ENST00000508635 CNOT11Q9UKZ1 510 aaKnown RBP4.18□□□□□ -1.74
UBE2D3-226ENST00000508635 OAZ3Q9UMX2 235 aa4.18□□□□□ -1.74
UBE2D3-226ENST00000508635 SLC45A1Q9Y2W3 748 aa4.18□□□□□ -1.74
UBE2D3-226ENST00000508635 VWA7Q9Y334 891 aa4.18□□□□□ -1.74
UBE2D3-226ENST00000508635 NUMBLQ9Y6R0 609 aa4.18□□□□□ -1.74
UBE2D3-226ENST00000508635 FLT1P17948 1338 aa4.18□□□□□ -1.74
UBE2D3-226ENST00000508635 MYH2Q9UKX2 1941 aa4.17□□□□□ -1.74
UBE2D3-226ENST00000508635 DOCK2Q92608 1830 aa4.17□□□□□ -1.74
UBE2D3-226ENST00000508635 TRIM75PA6NK02 468 aa4.17□□□□□ -1.74
UBE2D3-226ENST00000508635 K7ESM1 405 aa4.17□□□□□ -1.74
UBE2D3-226ENST00000508635 KATNA1O75449 491 aa4.17□□□□□ -1.74
UBE2D3-226ENST00000508635 IDH1O75874 414 aaKnown RBP4.17□□□□□ -1.74
UBE2D3-226ENST00000508635 IFIT2P09913 472 aaKnown RBP4.17□□□□□ -1.74
UBE2D3-226ENST00000508635 CR2P20023 1033 aa4.17□□□□□ -1.74
UBE2D3-226ENST00000508635 ENPP1P22413 925 aa4.17□□□□□ -1.74
UBE2D3-226ENST00000508635 XPAP23025 273 aaPredicted RBP4.17□□□□□ -1.74
UBE2D3-226ENST00000508635 PSMC4P43686 418 aa4.17□□□□□ -1.74
UBE2D3-226ENST00000508635 GUCY2FP51841 1108 aa4.17□□□□□ -1.74
UBE2D3-226ENST00000508635 PRMT2P55345 433 aa4.17□□□□□ -1.74
UBE2D3-226ENST00000508635 BPIFB4P59827 614 aa4.17□□□□□ -1.74
UBE2D3-226ENST00000508635 HGFACQ04756 655 aa4.17□□□□□ -1.74
UBE2D3-226ENST00000508635 ITKQ08881 620 aa4.17□□□□□ -1.74
UBE2D3-226ENST00000508635 MGAT5Q09328 741 aa4.17□□□□□ -1.74
UBE2D3-226ENST00000508635 SPP2Q13103 211 aa4.17□□□□□ -1.74
UBE2D3-226ENST00000508635 NFYCQ13952 458 aa4.17□□□□□ -1.74
UBE2D3-226ENST00000508635 TTF1Q15361 905 aaPredicted RBP4.17□□□□□ -1.74
UBE2D3-226ENST00000508635 CPEB4Q17RY0 729 aaKnown RBP eCLIP4.17□□□□□ -1.74
UBE2D3-226ENST00000508635 TOR2AQ5JU69 321 aa4.17□□□□□ -1.74
UBE2D3-226ENST00000508635 TREML2Q5T2D2 321 aa4.17□□□□□ -1.74
UBE2D3-226ENST00000508635 KRT40Q6A162 431 aa4.17□□□□□ -1.74
UBE2D3-226ENST00000508635 GADL1Q6ZQY3 521 aa4.17□□□□□ -1.74
UBE2D3-226ENST00000508635 CLEC14AQ86T13 490 aa4.17□□□□□ -1.74
UBE2D3-226ENST00000508635 CLASRPQ8N2M8 674 aaKnown RBP4.17□□□□□ -1.74
UBE2D3-226ENST00000508635 MIGA1Q8NAN2 632 aa4.17□□□□□ -1.74
UBE2D3-226ENST00000508635 LMBR1Q8WVP7 490 aa4.17□□□□□ -1.74
UBE2D3-226ENST00000508635 KIF1BPQ96EK5 621 aa4.17□□□□□ -1.74
UBE2D3-226ENST00000508635 TMEM176AQ96HP8 235 aa4.17□□□□□ -1.74
UBE2D3-226ENST00000508635 ZNF333Q96JL9 665 aa4.17□□□□□ -1.74
UBE2D3-226ENST00000508635 ACAP3Q96P50 834 aa4.17□□□□□ -1.74
UBE2D3-226ENST00000508635 SORCS2Q96PQ0 1159 aa4.17□□□□□ -1.74
UBE2D3-226ENST00000508635 OR14A2Q96R54 314 aa4.17□□□□□ -1.74
UBE2D3-226ENST00000508635 UIMC1Q96RL1 719 aa4.17□□□□□ -1.74
UBE2D3-226ENST00000508635 RBM15Q96T37 977 aaKnown RBP eCLIP4.17□□□□□ -1.74
UBE2D3-226ENST00000508635 RIOK1Q9BRS2 568 aaKnown RBP4.17□□□□□ -1.74
UBE2D3-226ENST00000508635 DNAJC18Q9H819 358 aa4.17□□□□□ -1.74
UBE2D3-226ENST00000508635 NCDNQ9UBB6 729 aa4.17□□□□□ -1.74
UBE2D3-226ENST00000508635 SAP30BPQ9UHR5 308 aaKnown RBP4.17□□□□□ -1.74
UBE2D3-226ENST00000508635 ST6GALNAC2Q9UJ37 374 aa4.17□□□□□ -1.74
UBE2D3-226ENST00000508635 AGTPBP1Q9UPW5 1226 aa4.17□□□□□ -1.74
UBE2D3-226ENST00000508635 MAST2Q6P0Q8 1798 aa4.17□□□□□ -1.74
UBE2D3-226ENST00000508635 GOLIM4O00461 696 aa4.16□□□□□ -1.74
UBE2D3-226ENST00000508635 FOXS1O43638 330 aa4.16□□□□□ -1.74
UBE2D3-226ENST00000508635 TOX4O94842 621 aa4.16□□□□□ -1.74
UBE2D3-226ENST00000508635 FSBPO95073 299 aa4.16□□□□□ -1.74
UBE2D3-226ENST00000508635 LY86O95711 162 aa4.16□□□□□ -1.74
UBE2D3-226ENST00000508635 ASNSP08243 561 aa4.16□□□□□ -1.74
UBE2D3-226ENST00000508635 GAAP10253 952 aa4.16□□□□□ -1.74
UBE2D3-226ENST00000508635 ATP5JP18859 108 aa4.16□□□□□ -1.74
UBE2D3-226ENST00000508635 EN2P19622 333 aaPredicted RBP4.16□□□□□ -1.74
UBE2D3-226ENST00000508635 IBSPP21815 317 aaPredicted RBP4.16□□□□□ -1.74
UBE2D3-226ENST00000508635 HOXD10P28358 340 aa4.16□□□□□ -1.74
UBE2D3-226ENST00000508635 ADCY7P51828 1080 aa4.16□□□□□ -1.74
UBE2D3-226ENST00000508635 HMGCS2P54868 508 aa4.16□□□□□ -1.74
UBE2D3-226ENST00000508635 ERVK-21P61565 698 aa4.16□□□□□ -1.74
UBE2D3-226ENST00000508635 SRSF2Q01130 221 aaKnown RBP4.16□□□□□ -1.74
UBE2D3-226ENST00000508635 PRKCZQ05513 592 aa4.16□□□□□ -1.74
UBE2D3-226ENST00000508635 FAPQ12884 760 aa4.16□□□□□ -1.74
UBE2D3-226ENST00000508635 HDAC1Q13547 482 aaPredicted RBP4.16□□□□□ -1.74
UBE2D3-226ENST00000508635 RIN1Q13671 783 aa4.16□□□□□ -1.74
UBE2D3-226ENST00000508635 ICAM4Q14773 271 aa4.16□□□□□ -1.74
UBE2D3-226ENST00000508635 MAN2A1Q16706 1144 aa4.16□□□□□ -1.74
UBE2D3-226ENST00000508635 SHROOM1Q2M3G4 852 aaPredicted RBP4.16□□□□□ -1.74
UBE2D3-226ENST00000508635 SLC9C1Q4G0N8 1177 aa4.16□□□□□ -1.74
UBE2D3-226ENST00000508635 SLC9C2Q5TAH2 1124 aa4.16□□□□□ -1.74
UBE2D3-226ENST00000508635 TCTN3Q6NUS6 607 aa4.16□□□□□ -1.74
UBE2D3-226ENST00000508635 TATDN1Q6P1N9 297 aa4.16□□□□□ -1.74
UBE2D3-226ENST00000508635 CERS3Q8IU89 383 aa4.16□□□□□ -1.74
UBE2D3-226ENST00000508635 SLC41A1Q8IVJ1 513 aa4.16□□□□□ -1.74
UBE2D3-226ENST00000508635 GPR135Q8IZ08 494 aa4.16□□□□□ -1.74
UBE2D3-226ENST00000508635 ANKRD13CQ8N6S4 541 aa4.16□□□□□ -1.74
UBE2D3-226ENST00000508635 PIK3C3Q8NEB9 887 aa4.16□□□□□ -1.74
UBE2D3-226ENST00000508635 SHCBP1Q8NEM2 672 aa4.16□□□□□ -1.74
UBE2D3-226ENST00000508635 OR14C36Q8NHC7 312 aa4.16□□□□□ -1.74
UBE2D3-226ENST00000508635 SMCR8Q8TEV9 937 aaPredicted RBP4.16□□□□□ -1.74
UBE2D3-226ENST00000508635 SLC7A6OSQ96CW6 309 aaPredicted RBP4.16□□□□□ -1.74
UBE2D3-226ENST00000508635 MTMR8Q96EF0 704 aa4.16□□□□□ -1.74
UBE2D3-226ENST00000508635 MENTQ9BUN1 341 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms