RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 TAF12Q16514 161 aa9.75□□□□□ -0.85
NUP54-207ENST00000508583 EXOC3L4Q17RC7 722 aa9.75□□□□□ -0.85
NUP54-207ENST00000508583 MGAT5BQ3V5L5 792 aa9.75□□□□□ -0.85
NUP54-207ENST00000508583 CFAP221Q4G0U5 840 aa9.75□□□□□ -0.85
NUP54-207ENST00000508583 TCP11X2Q5H9J9 407 aa9.75□□□□□ -0.85
NUP54-207ENST00000508583 FKBP15Q5T1M5 1219 aa9.75□□□□□ -0.85
NUP54-207ENST00000508583 VSTM1Q6UX27 236 aa9.75□□□□□ -0.85
NUP54-207ENST00000508583 RSPO2Q6UXX9 243 aaPredicted RBP9.75□□□□□ -0.85
NUP54-207ENST00000508583 TMC5Q6UXY8 1006 aa9.75□□□□□ -0.85
NUP54-207ENST00000508583 SCARA5Q6ZMJ2 495 aa9.75□□□□□ -0.85
NUP54-207ENST00000508583 RNF19BQ6ZMZ0 732 aa9.75□□□□□ -0.85
NUP54-207ENST00000508583 GBP6Q6ZN66 633 aa9.75□□□□□ -0.85
NUP54-207ENST00000508583 SPATA31D4Q6ZUB0 917 aa9.75□□□□□ -0.85
NUP54-207ENST00000508583 ENOSF1Q7L5Y1 443 aa9.75□□□□□ -0.85
NUP54-207ENST00000508583 B3GALNT2Q8NCR0 500 aa9.75□□□□□ -0.85
NUP54-207ENST00000508583 MYCBPAPQ8TBZ2 947 aa9.75□□□□□ -0.85
NUP54-207ENST00000508583 KBTBD7Q8WVZ9 684 aa9.75□□□□□ -0.85
NUP54-207ENST00000508583 SUSD6Q92537 303 aa9.75□□□□□ -0.85
NUP54-207ENST00000508583 JAKMIP2Q96AA8 810 aa9.75□□□□□ -0.85
NUP54-207ENST00000508583 ZNF512Q96ME7 567 aaPredicted RBP9.75□□□□□ -0.85
NUP54-207ENST00000508583 PGLYRP2Q96PD5 576 aa9.75□□□□□ -0.85
NUP54-207ENST00000508583 SEPT5Q99719 369 aaPredicted RBP9.75□□□□□ -0.85
NUP54-207ENST00000508583 TUBGCP2Q9BSJ2 902 aa9.75□□□□□ -0.85
NUP54-207ENST00000508583 PI4K2AQ9BTU6 479 aa9.75□□□□□ -0.85
NUP54-207ENST00000508583 NT5C1AQ9BXI3 368 aa9.75□□□□□ -0.85
NUP54-207ENST00000508583 ELOVL4Q9GZR5 314 aa9.75□□□□□ -0.85
NUP54-207ENST00000508583 S1PR5Q9H228 398 aa9.75□□□□□ -0.85
NUP54-207ENST00000508583 SMYD3Q9H7B4 428 aa9.75□□□□□ -0.85
NUP54-207ENST00000508583 ABI2Q9NYB9 513 aaPredicted RBP9.75□□□□□ -0.85
NUP54-207ENST00000508583 GCNT4Q9P109 453 aa9.75□□□□□ -0.85
NUP54-207ENST00000508583 POLIQ9UNA4 740 aa9.75□□□□□ -0.85
NUP54-207ENST00000508583 USP15Q9Y4E8 981 aaPredicted RBP9.75□□□□□ -0.85
NUP54-207ENST00000508583 ZNF197O14709 1029 aa9.74□□□□□ -0.85
NUP54-207ENST00000508583 TRIM66O15016 1216 aa9.74□□□□□ -0.85
NUP54-207ENST00000508583 RFPL2O75678 378 aa9.74□□□□□ -0.85
NUP54-207ENST00000508583 OR4Q2P0C623 313 aa9.74□□□□□ -0.85
NUP54-207ENST00000508583 RFX1P22670 979 aa9.74□□□□□ -0.85
NUP54-207ENST00000508583 ACAT1P24752 427 aaKnown RBP9.74□□□□□ -0.85
NUP54-207ENST00000508583 ANXA13P27216 316 aa9.74□□□□□ -0.85
NUP54-207ENST00000508583 MAGEA11P43364 429 aa9.74□□□□□ -0.85
NUP54-207ENST00000508583 KCNQ1P51787 676 aa9.74□□□□□ -0.85
NUP54-207ENST00000508583 SLC8A3P57103 927 aa9.74□□□□□ -0.85
NUP54-207ENST00000508583 CYP27A1Q02318 531 aa9.74□□□□□ -0.85
NUP54-207ENST00000508583 GCNT1Q02742 428 aa9.74□□□□□ -0.85
NUP54-207ENST00000508583 TWF1Q12792 350 aa9.74□□□□□ -0.85
NUP54-207ENST00000508583 DUSP4Q13115 394 aa9.74□□□□□ -0.85
NUP54-207ENST00000508583 CUL2Q13617 745 aa9.74□□□□□ -0.85
NUP54-207ENST00000508583 ZSCAN23Q3MJ62 389 aa9.74□□□□□ -0.85
NUP54-207ENST00000508583 VWA3BQ502W6 1294 aa9.74□□□□□ -0.85
NUP54-207ENST00000508583 CYP4A22Q5TCH4 519 aa9.74□□□□□ -0.85
NUP54-207ENST00000508583 SPOPLQ6IQ16 392 aa9.74□□□□□ -0.85
NUP54-207ENST00000508583 FAM171BQ6P995 826 aa9.74□□□□□ -0.85
NUP54-207ENST00000508583 C11orf57Q6ZUT1 292 aaPredicted RBP9.74□□□□□ -0.85
NUP54-207ENST00000508583 OTOP3Q7RTS5 596 aa9.74□□□□□ -0.85
NUP54-207ENST00000508583 PPM1KQ8N3J5 372 aa9.74□□□□□ -0.85
NUP54-207ENST00000508583 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.74□□□□□ -0.85
NUP54-207ENST00000508583 SEMA4DQ92854 862 aa9.74□□□□□ -0.85
NUP54-207ENST00000508583 ACSF2Q96CM8 615 aaPredicted RBP9.74□□□□□ -0.85
NUP54-207ENST00000508583 MED15Q96RN5 788 aa9.74□□□□□ -0.85
NUP54-207ENST00000508583 RTP3Q9BQQ7 232 aa9.74□□□□□ -0.85
NUP54-207ENST00000508583 MRPL45Q9BRJ2 306 aaKnown RBP9.74□□□□□ -0.85
NUP54-207ENST00000508583 PHF7Q9BWX1 381 aaPredicted RBP9.74□□□□□ -0.85
NUP54-207ENST00000508583 NDST4Q9H3R1 872 aa9.74□□□□□ -0.85
NUP54-207ENST00000508583 WDR6Q9NNW5 1121 aaKnown RBP9.74□□□□□ -0.85
NUP54-207ENST00000508583 UXTQ9UBK9 157 aaPredicted RBP9.74□□□□□ -0.85
NUP54-207ENST00000508583 USTQ9Y2C2 406 aa9.74□□□□□ -0.85
NUP54-207ENST00000508583 YIPF1Q9Y548 306 aa9.74□□□□□ -0.85
NUP54-207ENST00000508583 ZFP37Q9Y6Q3 630 aaPredicted RBP9.74□□□□□ -0.85
NUP54-207ENST00000508583 GOLGA6L19H0YKK7 550 aa9.73□□□□□ -0.85
NUP54-207ENST00000508583 CCL16O15467 120 aa9.73□□□□□ -0.85
NUP54-207ENST00000508583 PDGFRBP09619 1106 aa9.73□□□□□ -0.85
NUP54-207ENST00000508583 WEE2P0C1S8 567 aa9.73□□□□□ -0.85
NUP54-207ENST00000508583 HAPLN1P10915 354 aaPredicted RBP9.73□□□□□ -0.85
NUP54-207ENST00000508583 PTPN2P17706 415 aa9.73□□□□□ -0.85
NUP54-207ENST00000508583 PTPN1P18031 435 aaKnown RBP9.73□□□□□ -0.85
NUP54-207ENST00000508583 LMO2P25791 158 aa9.73□□□□□ -0.85
NUP54-207ENST00000508583 NDST1P52848 882 aa9.73□□□□□ -0.85
NUP54-207ENST00000508583 CDH8P55286 799 aa9.73□□□□□ -0.85
NUP54-207ENST00000508583 PSMC1P62191 440 aaKnown RBP9.73□□□□□ -0.85
NUP54-207ENST00000508583 FILIP1LQ4L180 1135 aa9.73□□□□□ -0.85
NUP54-207ENST00000508583 PABPC1LQ4VXU2 614 aaKnown RBP9.73□□□□□ -0.85
NUP54-207ENST00000508583 CDKAL1Q5VV42 579 aa9.73□□□□□ -0.85
NUP54-207ENST00000508583 OSTM1Q86WC4 334 aa9.73□□□□□ -0.85
NUP54-207ENST00000508583 IRF2BP1Q8IU81 584 aa9.73□□□□□ -0.85
NUP54-207ENST00000508583 ADHFE1Q8IWW8 467 aa9.73□□□□□ -0.85
NUP54-207ENST00000508583 PLCD3Q8N3E9 789 aa9.73□□□□□ -0.85
NUP54-207ENST00000508583 AOPEPQ8N6M6 819 aa9.73□□□□□ -0.85
NUP54-207ENST00000508583 C12orf76Q8N812 135 aaPredicted RBP9.73□□□□□ -0.85
NUP54-207ENST00000508583 ATAD1Q8NBU5 361 aa9.73□□□□□ -0.85
NUP54-207ENST00000508583 EHBP1Q8NDI1 1231 aa9.73□□□□□ -0.85
NUP54-207ENST00000508583 FAM200AQ8TCP9 573 aa9.73□□□□□ -0.85
NUP54-207ENST00000508583 SMARCD1Q96GM5 515 aa9.73□□□□□ -0.85
NUP54-207ENST00000508583 GCNAQ96QF7 691 aa9.73□□□□□ -0.85
NUP54-207ENST00000508583 ANP32EQ9BTT0 268 aa9.73□□□□□ -0.85
NUP54-207ENST00000508583 APOL5Q9BWW9 433 aa9.73□□□□□ -0.85
NUP54-207ENST00000508583 INTS2Q9H0H0 1204 aaKnown RBP9.73□□□□□ -0.85
NUP54-207ENST00000508583 APOBEC3GQ9HC16 384 aaKnown RBP9.73□□□□□ -0.85
NUP54-207ENST00000508583 AVENQ9NQS1 362 aaPredicted RBP9.73□□□□□ -0.85
NUP54-207ENST00000508583 ASAH2Q9NR71 780 aa9.73□□□□□ -0.85
NUP54-207ENST00000508583 CISHQ9NSE2 258 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms