RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 SRSF2Q01130 221 aaKnown RBP5.23□□□□□ -1.57
PDLIM5-211ENST00000508531 HDAC1Q13547 482 aaPredicted RBP5.23□□□□□ -1.57
PDLIM5-211ENST00000508531 NOMO1Q15155 1222 aa5.23□□□□□ -1.57
PDLIM5-211ENST00000508531 ZNF529Q6P280 563 aa5.23□□□□□ -1.57
PDLIM5-211ENST00000508531 Q6ZNX1 250 aa5.23□□□□□ -1.57
PDLIM5-211ENST00000508531 KCNK18Q7Z418 384 aa5.23□□□□□ -1.57
PDLIM5-211ENST00000508531 SUGP1Q8IWZ8 645 aaKnown RBP5.23□□□□□ -1.57
PDLIM5-211ENST00000508531 GOLGA5Q8TBA6 731 aa5.23□□□□□ -1.57
PDLIM5-211ENST00000508531 HOXB13Q92826 284 aaPredicted RBP5.23□□□□□ -1.57
PDLIM5-211ENST00000508531 MYOCQ99972 504 aa5.23□□□□□ -1.57
PDLIM5-211ENST00000508531 UTP14AQ9BVJ6 771 aaKnown RBP5.23□□□□□ -1.57
PDLIM5-211ENST00000508531 CASS4Q9NQ75 786 aa5.23□□□□□ -1.57
PDLIM5-211ENST00000508531 FBXO34Q9NWN3 711 aa5.23□□□□□ -1.57
PDLIM5-211ENST00000508531 PSD3Q9NYI0 1048 aa5.23□□□□□ -1.57
PDLIM5-211ENST00000508531 AJAP1Q9UKB5 411 aaPredicted RBP5.23□□□□□ -1.57
PDLIM5-211ENST00000508531 PIK3R4Q99570 1358 aa5.23□□□□□ -1.57
PDLIM5-211ENST00000508531 MYO5BQ9ULV0 1848 aa5.23□□□□□ -1.57
PDLIM5-211ENST00000508531 TRPM2O94759 1503 aa5.23□□□□□ -1.57
PDLIM5-211ENST00000508531 MGST3O14880 152 aa5.22□□□□□ -1.57
PDLIM5-211ENST00000508531 GPANK1O95872 356 aa5.22□□□□□ -1.57
PDLIM5-211ENST00000508531 PRELPP51888 382 aa5.22□□□□□ -1.57
PDLIM5-211ENST00000508531 ELLP55199 621 aaPredicted RBP5.22□□□□□ -1.57
PDLIM5-211ENST00000508531 SIM1P81133 766 aaPredicted RBP5.22□□□□□ -1.57
PDLIM5-211ENST00000508531 MAP2K1Q02750 393 aaPredicted RBP5.22□□□□□ -1.57
PDLIM5-211ENST00000508531 ZKSCAN8Q15776 578 aaPredicted RBP5.22□□□□□ -1.57
PDLIM5-211ENST00000508531 TTC31Q49AM3 519 aaPredicted RBP5.22□□□□□ -1.57
PDLIM5-211ENST00000508531 BMP2KLQ5H9B9 411 aa5.22□□□□□ -1.57
PDLIM5-211ENST00000508531 ZNF362Q5T0B9 420 aaPredicted RBP5.22□□□□□ -1.57
PDLIM5-211ENST00000508531 GJC2Q5T442 439 aaPredicted RBP5.22□□□□□ -1.57
PDLIM5-211ENST00000508531 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.22□□□□□ -1.57
PDLIM5-211ENST00000508531 EGFL6Q8IUX8 553 aa5.22□□□□□ -1.57
PDLIM5-211ENST00000508531 KIAA1524Q8TCG1 905 aa5.22□□□□□ -1.57
PDLIM5-211ENST00000508531 NACC2Q96BF6 587 aa5.22□□□□□ -1.57
PDLIM5-211ENST00000508531 KIF1BPQ96EK5 621 aa5.22□□□□□ -1.57
PDLIM5-211ENST00000508531 ERO1AQ96HE7 468 aa5.22□□□□□ -1.57
PDLIM5-211ENST00000508531 FAM210AQ96ND0 272 aa5.22□□□□□ -1.57
PDLIM5-211ENST00000508531 LRFN3Q9BTN0 628 aa5.22□□□□□ -1.57
PDLIM5-211ENST00000508531 DUSP26Q9BV47 211 aa5.22□□□□□ -1.57
PDLIM5-211ENST00000508531 ADI1Q9BV57 179 aa5.22□□□□□ -1.57
PDLIM5-211ENST00000508531 SPATA5L1Q9BVQ7 753 aa5.22□□□□□ -1.57
PDLIM5-211ENST00000508531 KIAA1586Q9HCI6 787 aa5.22□□□□□ -1.57
PDLIM5-211ENST00000508531 LMBRD1Q9NUN5 540 aa5.22□□□□□ -1.57
PDLIM5-211ENST00000508531 TMEM74BQ9NUR3 256 aa5.22□□□□□ -1.57
PDLIM5-211ENST00000508531 TBCCD1Q9NVR7 557 aa5.22□□□□□ -1.57
PDLIM5-211ENST00000508531 SLC23A1Q9UHI7 598 aa5.22□□□□□ -1.57
PDLIM5-211ENST00000508531 ZBTB21Q9ULJ3 1066 aa5.22□□□□□ -1.57
PDLIM5-211ENST00000508531 ACTL7AQ9Y615 435 aa5.22□□□□□ -1.57
PDLIM5-211ENST00000508531 NOS1P29475 1434 aa5.22□□□□□ -1.57
PDLIM5-211ENST00000508531 NPHP3Q7Z494 1330 aa5.22□□□□□ -1.57
PDLIM5-211ENST00000508531 CAPN2P17655 700 aa5.21□□□□□ -1.58
PDLIM5-211ENST00000508531 MCAMP43121 646 aa5.21□□□□□ -1.58
PDLIM5-211ENST00000508531 MAGEA9P43362 315 aa5.21□□□□□ -1.58
PDLIM5-211ENST00000508531 TUBB4BP68371 445 aa5.21□□□□□ -1.58
PDLIM5-211ENST00000508531 TMPRSS15P98073 1019 aa5.21□□□□□ -1.58
PDLIM5-211ENST00000508531 NCBP1Q09161 790 aaKnown RBP5.21□□□□□ -1.58
PDLIM5-211ENST00000508531 ZNF169Q14929 603 aaPredicted RBP5.21□□□□□ -1.58
PDLIM5-211ENST00000508531 C20orf194Q5TEA3 1177 aa5.21□□□□□ -1.58
PDLIM5-211ENST00000508531 SP5Q6BEB4 398 aaPredicted RBP5.21□□□□□ -1.58
PDLIM5-211ENST00000508531 OTUD7BQ6GQQ9 843 aa5.21□□□□□ -1.58
PDLIM5-211ENST00000508531 CASC1Q6TDU7 716 aa5.21□□□□□ -1.58
PDLIM5-211ENST00000508531 LEKR1Q6ZMV7 388 aa5.21□□□□□ -1.58
PDLIM5-211ENST00000508531 UBE3BQ7Z3V4 1068 aa5.21□□□□□ -1.58
PDLIM5-211ENST00000508531 IQUBQ8NA54 791 aa5.21□□□□□ -1.58
PDLIM5-211ENST00000508531 NELL1Q92832 810 aa5.21□□□□□ -1.58
PDLIM5-211ENST00000508531 FUBP1Q96AE4 644 aaKnown RBP5.21□□□□□ -1.58
PDLIM5-211ENST00000508531 BOD1Q96IK1 185 aa5.21□□□□□ -1.58
PDLIM5-211ENST00000508531 CAAP1Q9H8G2 361 aa5.21□□□□□ -1.58
PDLIM5-211ENST00000508531 GALNT9Q9HCQ5 603 aa5.21□□□□□ -1.58
PDLIM5-211ENST00000508531 TMEM140Q9NV12 185 aa5.21□□□□□ -1.58
PDLIM5-211ENST00000508531 C14orf119Q9NWQ9 140 aa5.21□□□□□ -1.58
PDLIM5-211ENST00000508531 TERF2IPQ9NYB0 399 aa5.21□□□□□ -1.58
PDLIM5-211ENST00000508531 KCNE5Q9UJ90 142 aa5.21□□□□□ -1.58
PDLIM5-211ENST00000508531 MTO1Q9Y2Z2 717 aaKnown RBP5.21□□□□□ -1.58
PDLIM5-211ENST00000508531 JRKLQ9Y4A0 524 aa5.21□□□□□ -1.58
PDLIM5-211ENST00000508531 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.21□□□□□ -1.58
PDLIM5-211ENST00000508531 ATP6V1DQ9Y5K8 247 aa5.21□□□□□ -1.58
PDLIM5-211ENST00000508531 ARHGEF17Q96PE2 2063 aaPredicted RBP5.2□□□□□ -1.58
PDLIM5-211ENST00000508531 GOLIM4O00461 696 aa5.2□□□□□ -1.58
PDLIM5-211ENST00000508531 CCP110O43303 1012 aa5.2□□□□□ -1.58
PDLIM5-211ENST00000508531 ENDOD1O94919 500 aa5.2□□□□□ -1.58
PDLIM5-211ENST00000508531 C1RP00736 705 aa5.2□□□□□ -1.58
PDLIM5-211ENST00000508531 IGLV2-14P01704 120 aa5.2□□□□□ -1.58
PDLIM5-211ENST00000508531 GSPT1P15170 499 aaKnown RBP5.2□□□□□ -1.58
PDLIM5-211ENST00000508531 PCSK1P29120 753 aa5.2□□□□□ -1.58
PDLIM5-211ENST00000508531 SOX5P35711 763 aa5.2□□□□□ -1.58
PDLIM5-211ENST00000508531 MALLQ13021 153 aa5.2□□□□□ -1.58
PDLIM5-211ENST00000508531 SEPT2Q15019 361 aa5.2□□□□□ -1.58
PDLIM5-211ENST00000508531 CYP2A13Q16696 494 aa5.2□□□□□ -1.58
PDLIM5-211ENST00000508531 ANO4Q32M45 955 aa5.2□□□□□ -1.58
PDLIM5-211ENST00000508531 FOXR2Q6PJQ5 311 aa5.2□□□□□ -1.58
PDLIM5-211ENST00000508531 KRT28Q7Z3Y7 464 aa5.2□□□□□ -1.58
PDLIM5-211ENST00000508531 ARHGEF25Q86VW2 580 aa5.2□□□□□ -1.58
PDLIM5-211ENST00000508531 NBPF5PQ86XG9 351 aaPredicted RBP5.2□□□□□ -1.58
PDLIM5-211ENST00000508531 ANKRD20A12PQ8NF67 263 aa5.2□□□□□ -1.58
PDLIM5-211ENST00000508531 CCHCR1Q8TD31 782 aa5.2□□□□□ -1.58
PDLIM5-211ENST00000508531 EXOC4Q96A65 974 aa5.2□□□□□ -1.58
PDLIM5-211ENST00000508531 PAIP2Q9BPZ3 127 aaKnown RBP5.2□□□□□ -1.58
PDLIM5-211ENST00000508531 DNAJC28Q9NX36 388 aa5.2□□□□□ -1.58
PDLIM5-211ENST00000508531 LRIT1Q9P2V4 623 aa5.2□□□□□ -1.58
PDLIM5-211ENST00000508531 DDX19BQ9UMR2 479 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms