RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 AKNAD1Q5T1N1 836 aa6.7□□□□□ -1.34
TOPBP1-206ENST00000508524 TSTD2Q5T7W7 516 aa6.7□□□□□ -1.34
TOPBP1-206ENST00000508524 RAVER1Q8IY67 606 aaKnown RBP6.7□□□□□ -1.34
TOPBP1-206ENST00000508524 CAMKK1Q8N5S9 505 aa6.7□□□□□ -1.34
TOPBP1-206ENST00000508524 SLC35G2Q8TBE7 412 aa6.7□□□□□ -1.34
TOPBP1-206ENST00000508524 ZNF384Q8TF68 577 aa6.7□□□□□ -1.34
TOPBP1-206ENST00000508524 TTYH3Q9C0H2 523 aa6.7□□□□□ -1.34
TOPBP1-206ENST00000508524 CPNE5Q9HCH3 593 aa6.7□□□□□ -1.34
TOPBP1-206ENST00000508524 DKK3Q9UBP4 350 aa6.7□□□□□ -1.34
TOPBP1-206ENST00000508524 STAP2Q9UGK3 403 aa6.7□□□□□ -1.34
TOPBP1-206ENST00000508524 RBMXL2O75526 392 aaKnown RBP6.69□□□□□ -1.34
TOPBP1-206ENST00000508524 UBXN7O94888 489 aa6.69□□□□□ -1.34
TOPBP1-206ENST00000508524 PDHA1P08559 390 aa6.69□□□□□ -1.34
TOPBP1-206ENST00000508524 HTR1BP28222 390 aa6.69□□□□□ -1.34
TOPBP1-206ENST00000508524 LONRF3Q496Y0 759 aa6.69□□□□□ -1.34
TOPBP1-206ENST00000508524 ODR4Q5SWX8 454 aa6.69□□□□□ -1.34
TOPBP1-206ENST00000508524 PPP1R35Q8TAP8 253 aa6.69□□□□□ -1.34
TOPBP1-206ENST00000508524 ACO2Q99798 780 aaKnown RBP6.69□□□□□ -1.34
TOPBP1-206ENST00000508524 EHD3Q9NZN3 535 aa6.69□□□□□ -1.34
TOPBP1-206ENST00000508524 CPA4Q9UI42 421 aa6.69□□□□□ -1.34
TOPBP1-206ENST00000508524 ADAM21Q9UKJ8 722 aa6.69□□□□□ -1.34
TOPBP1-206ENST00000508524 ST3GAL5Q9UNP4 418 aa6.69□□□□□ -1.34
TOPBP1-206ENST00000508524 MED16Q9Y2X0 877 aa6.69□□□□□ -1.34
TOPBP1-206ENST00000508524 PLEKHM1Q9Y4G2 1056 aa6.69□□□□□ -1.34
TOPBP1-206ENST00000508524 PPM1DO15297 605 aa6.68□□□□□ -1.34
TOPBP1-206ENST00000508524 NR2F6P10588 404 aa6.68□□□□□ -1.34
TOPBP1-206ENST00000508524 KCNJ5P48544 419 aa6.68□□□□□ -1.34
TOPBP1-206ENST00000508524 LOXL3P58215 753 aa6.68□□□□□ -1.34
TOPBP1-206ENST00000508524 GTF2H3Q13889 308 aa6.68□□□□□ -1.34
TOPBP1-206ENST00000508524 FGL2Q14314 439 aa6.68□□□□□ -1.34
TOPBP1-206ENST00000508524 TBCCQ15814 346 aa6.68□□□□□ -1.34
TOPBP1-206ENST00000508524 PLEKHG6Q3KR16 790 aa6.68□□□□□ -1.34
TOPBP1-206ENST00000508524 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.68□□□□□ -1.34
TOPBP1-206ENST00000508524 ADARB2Q9NS39 739 aaKnown RBP6.68□□□□□ -1.34
TOPBP1-206ENST00000508524 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.68□□□□□ -1.34
TOPBP1-206ENST00000508524 TTLL1O95922 423 aa6.67□□□□□ -1.34
TOPBP1-206ENST00000508524 GRPP07492 148 aa6.67□□□□□ -1.34
TOPBP1-206ENST00000508524 ATXN1LP0C7T5 689 aaKnown RBP6.67□□□□□ -1.34
TOPBP1-206ENST00000508524 ZFXP17010 805 aaPredicted RBP6.67□□□□□ -1.34
TOPBP1-206ENST00000508524 GPD1P21695 349 aa6.67□□□□□ -1.34
TOPBP1-206ENST00000508524 SOX10P56693 466 aa6.67□□□□□ -1.34
TOPBP1-206ENST00000508524 EIF2B5Q13144 721 aaKnown RBP6.67□□□□□ -1.34
TOPBP1-206ENST00000508524 KRTAP5-3Q6L8H2 238 aa6.67□□□□□ -1.34
TOPBP1-206ENST00000508524 ZBTB34Q8NCN2 500 aa6.67□□□□□ -1.34
TOPBP1-206ENST00000508524 NT5C1BQ96P26 610 aa6.67□□□□□ -1.34
TOPBP1-206ENST00000508524 HAPLN3Q96S86 360 aa6.67□□□□□ -1.34
TOPBP1-206ENST00000508524 NELL2Q99435 816 aa6.67□□□□□ -1.34
TOPBP1-206ENST00000508524 GCOM1H8Y6P7 765 aaPredicted RBP6.66□□□□□ -1.34
TOPBP1-206ENST00000508524 DRD4P21917 467 aa6.66□□□□□ -1.34
TOPBP1-206ENST00000508524 VIPR2P41587 438 aa6.66□□□□□ -1.34
TOPBP1-206ENST00000508524 ARFIP2P53365 341 aa6.66□□□□□ -1.34
TOPBP1-206ENST00000508524 LILRA4P59901 499 aa6.66□□□□□ -1.34
TOPBP1-206ENST00000508524 BMPR2Q13873 1038 aa6.66□□□□□ -1.34
TOPBP1-206ENST00000508524 IQCB1Q15051 598 aa6.66□□□□□ -1.34
TOPBP1-206ENST00000508524 ICE2Q659A1 982 aa6.66□□□□□ -1.34
TOPBP1-206ENST00000508524 ZNF788Q6ZQV5 615 aa6.66□□□□□ -1.34
TOPBP1-206ENST00000508524 MAVSQ7Z434 540 aa6.66□□□□□ -1.34
TOPBP1-206ENST00000508524 AMIGO2Q86SJ2 522 aa6.66□□□□□ -1.34
TOPBP1-206ENST00000508524 RASAL3Q86YV0 1011 aa6.66□□□□□ -1.34
TOPBP1-206ENST00000508524 P2RX7Q99572 595 aaKnown RBP6.66□□□□□ -1.34
TOPBP1-206ENST00000508524 SERTAD4Q9NUC0 356 aa6.66□□□□□ -1.34
TOPBP1-206ENST00000508524 SSX2IPQ9Y2D8 614 aa6.66□□□□□ -1.34
TOPBP1-206ENST00000508524 FRMD4BQ9Y2L6 1034 aa6.66□□□□□ -1.34
TOPBP1-206ENST00000508524 JUPP14923 745 aa6.65□□□□□ -1.34
TOPBP1-206ENST00000508524 NPR1P16066 1061 aa6.65□□□□□ -1.34
TOPBP1-206ENST00000508524 PPIFP30405 207 aaKnown RBP6.65□□□□□ -1.34
TOPBP1-206ENST00000508524 PXNP49023 591 aaPredicted RBP6.65□□□□□ -1.34
TOPBP1-206ENST00000508524 SLC11A2P49281 568 aa6.65□□□□□ -1.34
TOPBP1-206ENST00000508524 AGFG1P52594 562 aaKnown RBP6.65□□□□□ -1.34
TOPBP1-206ENST00000508524 SP2Q02086 613 aa6.65□□□□□ -1.34
TOPBP1-206ENST00000508524 AMOTQ4VCS5 1084 aa6.65□□□□□ -1.34
TOPBP1-206ENST00000508524 SFRP4Q6FHJ7 346 aaPredicted RBP6.65□□□□□ -1.34
TOPBP1-206ENST00000508524 LAYNQ6UX15 382 aa6.65□□□□□ -1.34
TOPBP1-206ENST00000508524 OVCH2Q7RTZ1 564 aa6.65□□□□□ -1.34
TOPBP1-206ENST00000508524 DAAM2Q86T65 1068 aa6.65□□□□□ -1.34
TOPBP1-206ENST00000508524 DTX2Q86UW9 622 aa6.65□□□□□ -1.34
TOPBP1-206ENST00000508524 COL23A1Q86Y22 540 aaPredicted RBP6.65□□□□□ -1.34
TOPBP1-206ENST00000508524 ATRIPQ8WXE1 791 aa6.65□□□□□ -1.34
TOPBP1-206ENST00000508524 PTDSS2Q9BVG9 487 aa6.65□□□□□ -1.34
TOPBP1-206ENST00000508524 TRIM54Q9BYV2 358 aa6.65□□□□□ -1.34
TOPBP1-206ENST00000508524 ZMAT3Q9HA38 289 aaKnown RBP6.65□□□□□ -1.34
TOPBP1-206ENST00000508524 CNNM1Q9NRU3 951 aa6.65□□□□□ -1.34
TOPBP1-206ENST00000508524 PIH1D1Q9NWS0 290 aaKnown RBP6.65□□□□□ -1.34
TOPBP1-206ENST00000508524 XPR1Q9UBH6 696 aa6.65□□□□□ -1.34
TOPBP1-206ENST00000508524 BICRAQ9NZM4 1560 aa6.65□□□□□ -1.35
TOPBP1-206ENST00000508524 WIPF3A6NGB9 483 aa6.64□□□□□ -1.35
TOPBP1-206ENST00000508524 PRPF3O43395 683 aaKnown RBP6.64□□□□□ -1.35
TOPBP1-206ENST00000508524 NXPH3O95157 252 aa6.64□□□□□ -1.35
TOPBP1-206ENST00000508524 EBLN1P0CF75 366 aa6.64□□□□□ -1.35
TOPBP1-206ENST00000508524 MYBP10242 640 aa6.64□□□□□ -1.35
TOPBP1-206ENST00000508524 CCT8P50990 548 aa6.64□□□□□ -1.35
TOPBP1-206ENST00000508524 UCP3P55916 312 aa6.64□□□□□ -1.35
TOPBP1-206ENST00000508524 LRRC41Q15345 812 aa6.64□□□□□ -1.35
TOPBP1-206ENST00000508524 PLAC9Q5JTB6 97 aa6.64□□□□□ -1.35
TOPBP1-206ENST00000508524 ZNF618Q5T7W0 954 aa6.64□□□□□ -1.35
TOPBP1-206ENST00000508524 TEDDM1Q5T9Z0 273 aa6.64□□□□□ -1.35
TOPBP1-206ENST00000508524 ARHGAP40Q5TG30 622 aa6.64□□□□□ -1.35
TOPBP1-206ENST00000508524 ZNF551Q7Z340 670 aaPredicted RBP6.64□□□□□ -1.35
TOPBP1-206ENST00000508524 RUNDC1Q96C34 613 aa6.64□□□□□ -1.35
TOPBP1-206ENST00000508524 SERTAD3Q9UJW9 196 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms